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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-----------
GT1
--------->
TOE2(3)
<---------
ICU4
--------->
GLK1(2)
------>
ZmHOX2a(1)
<----------
DOF2
<---------
GLK1(2)
---------
--------->
TOE2(3)
<---------
ANAC58
--------->
ARR14(2)
----------->
RAV1(1)
-------------->
AtSPL8
<---------
ANAC58
<---------
ARR14(2)
--------->
DAG2
---------------
AtSPL8
<------
ZmHOX2a(1)
<----------
DOF2
---------->
DOF2
>
YAB1
--------->
TOE1(3)
<---------
YAB1
--------->
ARR14(2)
--------->
REM1(1)
--------->
REM1(1)
tttgagtacttccttaattgttacatttcactaggattgctttccaaatattcaactttcagattcttacatcaatatgttgaaaaagctacaccagtaa
9702600
------
------
--------->
ANAC58
--------->
ANAC58
<---------
AHL20(2)
--------->
ANAC46
--------->
AHL20(1)
--------->
ZAT18
<---------
AHL20(1)
<---------
ZAT18
<---------
AHL20(1)
--------->
ZAT18
----------->
GT1
<---------
ZAT14
--------->
AHL20(2)
--------->
ARR11(3)
<-----
<---------------
AGL15
<---------
ARR11(3)
---------
--------------->
AGL15
<---------
AHL20(2)
--------->
ZAT14
<-------
TEIL
<---------
ARR11(3)
--------->
AHL20(1)
<---------
AHL20(2)
-------
-->
GT1
--------->
MYB52(1)
--------->
ARR11(3)
--------->
AHL20(2)
--------->
AHL20(2)
-------
aactagtttcatgggctaactgataaatctcacaatagattttagtttatatagtaaaatatatattttataaatcttttaaatgtgcacacaaaaaaat
9702700
<---------
AHL20(2)
--------->
AHL20(2)
--------->
STY1(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
STY1(2)
--->
ARR11(3)
--------->
AHL20(2)
------>
MYB46(1)
--->
GLK1(2)
<---------
AHL20(2)
--------->
AHL20(2)
----
ARR11(3)
--------->
At4g35610
--------->
AHL20(2)
>
AHL20(2)
<---------
At4g35610
<---------
AHL20(2)
--------->
DAG2
-->
CCA1(1)
<---------
At5g28300
----------->
GT1
------>
MYB83
<--
-->
RVE1(1)
<-----------
GT1
--------->
ICU4
--------->
AHL20(2)
---------->
DOF2
cttttaaatgtgaatttacagctaaatttttttaaaaacatttgctgtaatattcagaagtgtaattttaaattaaaacctagctagtaaagtaatagtc
9702800
<----------
DOF2
<---------
MYB59
<---------
ANAC58
--------->
ANAC55(2)
<---------
ANAC55(2)
<---
--------->
ANAC58
----
--------->
ANAC58
-----
--------->
ANAC46
-----
<---------
ICU4
-----
--------->
ATHB51
<----
<--------
HAHB4
<----
<-----------
GT1
<---------
YAB1
-----
<-----------
GT1
--------->
ICU4
<---------
ANAC55(1)
=====
<---------
AHL20(2)
------------>
CBF
--------->
ANAC55(1)
<----
--------->
AHL20(2)
--------->
ANAC58
<---------
ANAC58
<----
<---------
AHL20(2)
<---------
AHL20(2)
--------->
ICU4
<---------
AHL20(2)
-------
REM1(2)
<----------
DOF2
--------->
ANAC46
--------->
ANAC58
<-----------
GT1
--------->
AHL20(2)
tacacgattttaatttccttttatccacttcaacgtaatattaaaaattcgcaatgtttccattattacgtaactttctaaactcgtttcatataatttc
9702900
--------->
YAB1
----------->
GT1
<-------
TEIL
<---------
MYB46(3)
<------------
CBF
--------->
YAB1
------------
AGL15
<---------
ICU4
----------->
AGL15
--------->
YAB1
------------>
AGL3
<---------
YAB1
<----------
DOF2
------------>
AG
--------->
AHL20(2)
------------>
AGL1
<---------
AHL20(2)
-------------
AG
<---------
GLK1(2)
<---------
YAB1
--------->
YAB1
-------------
AGL1
--------->
ATHB12
<---------
AHL20(1)
--------->
At4g35610
-
------------>
AGL2
<------------
CBF
<---------
ARR11(3)
<---------
At4g35610
-
======================================================================================
MADS_MADS
<
-------------
AGL2
--------->
ANAC58
--------->
AHL20(1)
--------------->
AGL15
---------
-------------
AGL3
--------->
ANAC58
--------->
AHL20(2)
<-----------
GT1
<---------
YAB1
caaaattggttcgtaaatcatatcaagaaattgatttgattctccactatatattattaataatctcttttgaccagttttagctaaaactataatacta
9703000
--------->
O2
<---------
ZAT18
--------->
ATHB12
--------->
YAB1
<---------
ICU4
<--------
HAHB4
--------->
ATHB51
------->
TEIL
---------->
DOF2
<------
NtERF2
<---------
O2
=======================
HOX2a_HOX2a
===============================================
bZIP_DOF
====================
HOX2a_HOX2a
XXXXXXXXXXXXXXXXXXXX>
MIR169D-G
--------->
ZAT18
<------
ZmHOX2a(2)
----------->
HVH21
-------->
ANAC58
--------->
LBD16
--------->
TGA1a
--------->
AGP1
------>
ZmHOX2a(1)
-------->
ANAC58
--------->
LBD16
<---------
TGA1a
<---------
ARR14(2)
--------->
LBD16
----------
ID1
--------->
YAB1
--------->
ICU4
----------->
RAV1(1)
------>
ZmHOX2a(1)
----
>
ZAT6
------->
TEIL
<---------
LBD16
<---------
ALFIN1
--------->
ARR14(2)
<---------
ANAC46
<-----
agaagccaaag
atgaatcatcgtctcgccggaataattagcccacttggccacattactacagatccaattcgttcctcctccgtgaacccttcgtctcc
9703100
------>
ZmHOX2a(2)
=======================
HOX2a_HOX2a
========================
HOX2a_HOX2a
--------->
ARR11(3)
<---------
At4g35610
<---------
ARR11(3)
--------->
ZAT2
--------->
GLK1(1)
----------->
RAV1(2)
<---------
GLK1(1)
<---------
ZAT2
--------->
YAB1
--------->
ARR14(2)
<-----------
HVH21
<---------
ATHB12
<---------
ARR14(2)
------->
MYC3
------>
MYB83
<---------
At4g35610
--------->
MYB46(3)
------>
MYB46(1)
<---------
MYB46(3)
--------->
TOE2(3)
<-------
MYC3
--------->
WOX13(1)
<---------
MYB52(1)
----->
LBD16
<---------
CCA1(2)
--------->
O2
<---------
ANAC58
<---------
GLK1(1)
=======
----
LBD16
<-----------
GT1
<---------
MYB52(1)
<---------
ANAC58
<------
ZmHOX2a(2)
------>
ZmHOX2a(1)
ggtttactacaaaaccattgttaaccatttcaaatctcaaaccggtaaccacgtttcacctgggcttaccaatcaagagatctcagccgttgaatcctct
9703200
<------
MYB46(1)
<------
MYB83
<---------
DEAR3(2)
--------->
MYB111(2)
<---------
AtMYB61
--------->
MYB46(2)
--------------->
AtSPL8
--------->
MYB111(1)
<---------
LBD16
--------->
MYB55(2)
<---------
ARR14(2)
<---------
GLK1(2)
<---------
MYB46(3)
<---------
SPL7
<---------
MYB52(1)
<---------
MYB55(1)
<---------
ARR14(2)
------
------>
ZmHOX2a(2)
<--------
P
<---------
SPL7
<-----
<---------
GLK1(1)
<---------
MYB52(1)
<---------
ANAC58
<------
<---------
ARR11(3)
<-------
GAMYB
<---------
ANAC58
--------->
LBD16
<----------
DOF2
<---------
SPL7
<---------
LBD16
<-----------
GT1
<-----------
HVH21
===========================
HOX2a_HOX2a
<---------
SPL7
<-----------
GT1
--------->
LBD16
-----
catggtttctctttccctcttgatctccgttcgattctccaaaccggtcttccggttggtaccaattttcccaattggcgaaccgggtcgaaccggaata
9703300
----------->
HVH21
----------->
TGA1
<---------
ARR14(2)
--------->
LBD16
--------->
ANAC58
--------->
ANAC58
<---------
ETT(1)
----------->
HVH21
<-----------
TGA1
--------->
DEAR3(2)
<------
NtERF2
<-----------
HVH21
------>
ZmHOX2a(2)
--------->
LBD16
--------->
ETT(2)
<------
ZmHOX2a(2)
--------->
ALFIN1
--------->
ANAC46
<---------
ARR14(2)
<----------
CDC5
<---------
O2
--------->
GLK1(2)
--------->
ARR14(2)
<---------
LBD16
--->
KAN4(1)
--------->
O2
<---------
GLK1(2)
<---------
LBD16
--------->
ARR14(2)
<---
----
KAN4(1)
--------->
bZIP60(2)
<---------
GLK1(2)
<---------
LBD16
<------
---
KAN4(2)
<---------
ALFIN1
--------->
ARR14(2)
--------->
GLK1(1)
<---------
bZIP60(2)
---->
YAB1
<---------
REM1(2)
<---------
ARR14(2)
<---------
GLK1(1)
<---------
ANAC46
atcttcttctccctcttcttaatctgtctcaacacgtcgtcagaaatggattctgggtcgattcttgggggatccgacccggaaatgacgcggaggcttt
9703400
<<<<<<<<<<
E2Fb
<---------
ANAC58
>>>>>>>>>>
E2Fa
<---------
ANAC46
<---------
ANAC58
<---------
LBD16
<<<<<<<<<
E2Fd
------>
NtERF2
<------
NtERF2
--------->
ANAC58
--------->
ANAC58
<---------
ATERF1(1)
------>
NtERF2
<<<<<<<<<
E2Fc
<---------
ANAC58
<---------
ARR14(2)
<---------
ANAC58
<-----------------
AGL3
--------->
LBD16
--------->
ANAC46
--------->
DEAR3(1)
<--------
------>
ZmHOX2a(2)
<---------
ZAT14
--------->
ANAC55(2)
--------->
ARR14(2)
<------
ZmHOX2a(2)
--------->
ZAT14
--------->
ANAC46
----------------->
AGL3
<---------
WOX13(1)
<---------
ARR14(2)
--------->
ANAC46
--------->
LBD16
--------
HVH21
--------->
ATHB12
<---------
MYB52(1)
<-----------
GT1
--------->
ANAC46
--------->
GLK1(1)
----
DOF2
--------->
ARR11(3)
<---------
LBD16
--------->
ARR14(2)
<---------
DEAR3(1)
<---------
GLK1(1)
gtcactcgtgaagaaattgattgagatcgctccggtactcgtccctgtatacggcgatttttacgtcccttcgacgacgccaaatttggcgggaaatcca
9703500
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AGI:
At2g22790.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G67020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17740.1)
Range:
from: 9703012
to: 9703989
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.