Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             ----------                                                                                         <---------ANAC46                                                                                         <---------ANAC58                                                                                 <-----------TGA1                                                                                 <-----------HVH21                                                                                --------->TGA1a                                                                                <---------O2                                                                                --------->O2                                                                                <---------bZIP60(1)                                                                                <---------TGA1a                                                                                --------->ANAC46                                                                                <<<<<<<<<<HY5                                                                                --------->ANAC55(2)                                                                                --------->bZIP60(2)                                                                                --------->bZIP60(1)                                                                                --------->TGA2(1)                                                                                <---------TGA2(1)                                                                               <-----------STF1                                                                               ----------->STF1                                        <---------------AtSPL8                <---------DOF5.7(2)                                       <---------ANAC58                      ----------->HVH21                                       <---------ANAC58            ----------------------->TaNAC69(2)                                      <-------TEIL         ----------->GT1   --------->WRKY12                               --------->LBD16           ---------->DOF2    <---------WOX13(1)                               --------->At4g35610    <---------At4g35610   <--------P   <---------ANAC58 ---------DOF2            <---------GLK1(1)           --------->At4g35610   ==============MYC_MYB --------DAG2          --------->ETT(2)<---------ANAC46  =================================bZIP_DOF   actttattgtttcaaaaactcattgtagacatccgctaaattcgtgtacaaaactcagcaaaagttaaatgctgtctggttgacgtcactgtcttgtgat  7710500                                          <-----------GT1                                     <---------YAB1                              ------>ZmHOX2a(1)                             --------->TOE2(3)                         --------->HSFC1(2)            --------->ARR11(3)                         <---------HSFC1(2)<---------TOE2(3)        <---------AtLEC2       <---------AHL20(2)                         --------->HSFB2a(1)           --------->GLK1(2)                   --------->AHL20(2) ->GT1            XXXXXXXXXXXXXXXXXXXX>MIR846          <---------ARR11(3)     --------->ANAC46   ----   atatgaagttagaatacttcaaatcgaagttcctaaatgatgtttaacatttttaaaaatctagtattttgcattgttacacgagaaacttatttaaaat  7710600                                                                         <---------AHL20(2)                                                           <----------DOF2    <---------YAB1                                                        <-----------GT1  -------->HAHB4                                                        <---------AHL20(2) <---------YAB1                                                     <---------ARR11(3)  <---------ICU4                                                     <---------ICU4----------->GT1                                               ----------->GT1  ---------->DOF2                                           <---------YAB1  ==========================================                                  <---------AHL20(2) <---------AHL20(1) <---------ATHB51      -------                                 <---------AHL20(2)  --------->AHL20(1) --------->ICU4        -------                    <---------AHL20(2)  <---------AHL20(2) --------------->AGL15              -------              <---------RAP2.6(3)<---------AHL20(1)  --------->ARR11(3) <---------YAB1     --------->ZAT18    <---------YAB1 --------->AHL20(2)   --------->AHL20(2) <---------------AGL15 <---------ATHB12 ----->YAB1  --------->RAP2.6(2) --------->AHL20(2) --------->ICU4<---------TOE2(3)   ---------->DOF2   catactattcttaagccgaaattttatatgatcaattttttttttaatattgtaatattttctttataaaggtaattattctaatcgtttaagcacacga  7710700                                      <-----------GT1                                   --------->TOE2(3)                                 <---------YAB1              ---------->DOF2                             ------>ZmHOX2a(2)          ---------->DOF2                            <------ZmHOX2a(2)      <---------DAG2 --------->AHL20(1)                           --------->ARR11(3)      ==================================================                           <---------ARR14(2)      <---------------AGL15                           <---------ARR11(3)      --------------->AGL15                    ---------         --------->ZAT6    <-----------ARR10       <----------DOF2--------->ARR11(3)        --------- ==================================================================MADS_MADS                --------- -->ANAC58                 --------->ARR14(2)   <-----------GT1----------->GT1         --------->AHL20(2) -->ANAC46                <------ZmHOX2a(1)<---------DAG2 --------->ANAC58         --------->AHL20(2) -->ANAC58              --------->MYB59    <----------DOF2--------->ANAC58        <---------ATHB12   ctagacgattagcactaatacaaaattaggatcttattcttaacccttttttacttttcaaagcaaagtatattgcaaattgcaatgaattaaacctaag  7710800                                                                                                    <                                                                                                   <-                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                           ==========                                                                                           <---------                                                                                        --------->ARR11(3)                                                                                      <---------HSFB2a(1)                                               <---------AHL20(2)                     --------->HSFC1(2)        <---------------AGL15                  --------->AHL20(2)                     --------->HSFB2a(1)        ------>ZmHOX2a(1)                   --------->AHL20(2)                      =================       <-----------------AGL3               <---------AHL20(2)                  ===================== <-----------GT1          ----------->GT1  <---------AHL20(2)            --------->YAB1 <---------ARR11(3) --------->MYB52(1)     ---------->DOF2    --------->AHL20(2)         ------>MYB46(1) <---------HSFC1(2) =======================MADS_MADS          <---------AHL20(1)         ------>MYB83  ---------->DOF2-- >TOE2(2)             <---------MYB59  <---------YAB1            <-----------GT1---------->DOF2   --- >TOE2(3)             --------->TOE2(3)<---------AHL20(2)     <----------DOF2  --------->AHL20(2)<--- >TOE1(2)    <---------WOX13(1)        --------->AHL20(2)     =======================================   aaataacgtcctctaattggtttacctaaagaaaaaatgttttaattaatttaaaacaaaatagcttttaccaaatgaaaataaaagaaagttctttgcc  7710900   <---------At4g35610   --------->At4g35610 ---------MYB52(1) ----------HVH21 -------TGA1a ------>O2 -------O2 =======bZIP_DOF                                                                <-----------HVH21 -DOF2  <---------CCA1(2)                                                       <-----------TGA1 =======bZIP_DOF                                                          <---------YAB1 =======bZIP_DOF                                                     <---------ZAT6 ------->LBD16                        *TSS                         <---------ANAC58 ------>TGA1a                    <---------O2        --------->DAG2<---------ANAC58        ---------- ------LBD16                ----------->HVH21       ---------->DOF2<---------ANAC46   --------->ATHB12 =======bZIP_DOF      <---------CCA1(2)          <----------ID1 <----------DOF2--------->ANAC46   ccgtgagctcatctctcttctcttctatctctgactcgtggttttctgaaaacgaaaagtttgaaactttcgtgttattcttcgtcactgattgtgacac  7711000                                           --------->GLK1(2)      --------->ANAC46                                   ------>MYB46(1)                --------->ANAC58                         ------>ZmHOX2a(1)<---------GLK1(2)       --------->ANAC58 ---------->DOF2                      <---------YAB1 ----------->RAV1(1)--------->ANAC58    --------->AHL20(2)                     <-----------GT1--------->REM1(1)   --------->ANAC58  <----------DOF2  ---------->DOF2 <---------GLK1(2)-------->P         ---------->DOF2  --------->ANAC58       ------- ->HVH21      ---------->DOF2      ------>MYB83     --------->AtLEC2   --------->ANAC58       <------   atataaaagaacccctaaaagattatccttcttcacctacaacaaattctggccatgaaagcaaactcaccccaagctttaaatgcaaagtagcgaaaca  7711100                                                                                                   <-                                                                                          --------->At5g28300                                                                                         ----------->GT1                                  --------->ANAC58                                    <---------ALFIN1 -->HSFC1(2)                --------->MYB46(3)   <----------DOF2                     --------->MYB46(3) ---HSFC1(2)------>ZmHOX2a(1)     --------->ANAC58         <-----------GT1   <---------At4g35610   --   tcccatcccatctcctccctctctctcttaaccactaagcaaaaatcccatctttctatataaacctctctcccaactctgctacttcccaccgtaaatc  7711200                                    --------->YAB1                                    <---------ICU4                                   <---------YAB1                                 --------->YAB1                                 <---------ICU4                                <---------YAB1                                --------->ICU4                          <----------DOF2              --------->YAB1<-----------TGA1                     <-----------GT1 <---------LBD16           --------->O2                --------->ARR14(2)                ------------ --------ARR14(2)          --------->bZIP60(2)         <---------ARR14(2)            ------>ZmHOX2a(1) ------->ARR14(2)         <------NtERF2             ----------------->AGL1  <-----------HVH21       <   gtttctgggttcttaagaataacatggcctcgtcatcatcatcatcttatagattccaatctgggtcttaccctctttcgtcaagtccttctcttgggaa  7711300                                                 <---------ANAC58    ------>ZmHOX2a(2)                                                 <---------ANAC58   <------ZmHOX2a(2)                                                <---------------AtSPL8                                          <---------------AGL15    --------->ARR11(3)                                          <----------DOF2 <---------ARR11(3)             ---------->DOF2              --------------->AGL15    <---------ARR11(3)       --------->ANAC58                  <-----------------AGL2 ------>NtERF2       --------->ANAC58                 --------->At4g35610     --------->LBD16    <---------SPL7                      <---------At4g35610   <---------LBD16 --------->WRI1                <---------ANAC58 --------------->AtSPL8  <---------WRKY18(1) ---------ANAC46               <---------ANAC58<---------ANAC46--------->ANAC46 <<<<<<<<<TBF1   tttcgtcgaacgcattaaagacgcttgtcatttccttgtctctgctgttttgggtaccattatctccgcgatcttgaccttcttcttcgcactaggtttg  7711400  Previous    Next  AGI:  At2g17730.1    Description:  zinc finger (C3HC4-type RING finger) family protein. Identical to RING-H2 finger protein ATL2B (ATL2B) [Arabidopsis Thaliana] (GB:Q8GT74;GB:Q8GWW3); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT4G35840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42935.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 7710938    to: 7712832    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.