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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------>
ZmHOX2a(2)
--------->
ARR11(3)
<---------
ARR11(3)
<---------
YAB1
--------->
ZAT2
<---------
GLK1(2)
--------->
At4g35610
--------->
ARR14(2)
<---------
ZAT2
<---------
ARR14(2)
--------->
GLK1(2)
--->
ZmHOX2a(2)
--------->
YAB1
<-------
TEIL
--------->
GLK1(2)
<--
-->
ICU4
<---------
ATHB12
<-----------
GT1
--------->
HSFB2a(2)
<------
ZmHOX2a(1)
---
YAB1
--------->
RAP2.3(3)
--------->
AHL20(2)
<---------
HSFB2a(2)
---------->
DOF2
>
YAB1
<---------
At4g35610
<---------
AHL20(2)
<----------
DOF2
<---------
GLK1(2)
<----
tcgaaatcgagcagccaatgatcttaaaaactctcaattaaacgttcggattttgattcttctttactggaagagaatttagattctgcaaaaggattga
2894500
--------->
ATERF1(2)
<---------
ATERF1(2)
xxxxxxxxxxxxxxxx>
smallRNA(i)
--------->
ARR14(2)
<---------
ARR14(2)
--------->
LBD16
<---------
LBD16
--------->
ARR14(2)
----------->
GT1
--------->
RAP2.6(2)
<---------------
AtSPL8
<---------
RAP2.6(3)
<---------------
AtSPL3
------>
NtERF2
--------------->
AtSPL3
--------->
LBD16
---------
<----------
CDC5
<---------
ARR14(2)
<---------
AHL20(2)
---------->
DOF2
---------->
DOF2
<xxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
<---------
YAB1
--------->
YAB1
----------->
GT1
--------->
ANAC58
<---------
GLK1(1)
---------->
DOF2
----
ZmHOX2a(1)
--------->
RAP2.6(3)
--------->
ANAC58
<-------
TEIL
<---------
LBD16
--------->
AHL20(2)
-----
TOE2(3)
--------->
MYB52(1)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
<------
NtERF2
<---------
AHL20(2)
ggaaacaaaatcaaaatagccaaaacggctaaaagagaactcacgcttaggtgagaaggtacatatccggatttagccggcaaagaactgattttaattg
2894600
------>
MYB46(1)
------>
MYB83
<---------
YAB1
--------->
DEAR3(2)
<---------
GLK1(1)
--------->
At5g28300
--------->
CCA1(2)
<---------
LBD16
<----------
DOF2
--------->
ARR14(2)
<---------
TOE1(3)
<---------
MYB59
--------->
DAG2
<---------
ARR14(2)
<----------
DOF2
--------->
LBD16
---------->
DOF2
<------
ZmHOX2a(1)
--------->
GLK1(2)
<---------
ANAC46
<---------
ANAC55(2)
---------->
DOF2
--------->
CCA1(2)
<---------
TOE2(3)
--------->
DREB2C(2)
>
ATHB12
<-------
TEIL
------>
ZmHOX2a(1)
--------->
CCA1(2)
---------->
DOF2
------->
TEIL
<
gaaaacaaaaaatacataaagcttcctctctctaaaggatatgagagagataagagagagaagcttttttaaaggttgcggtaatggaccgactttcaaa
2894700
<------
ZmHOX2a(2)
<---------
HSFB2a(1)
<---------
At4g35610
--------->
HSFB2a(1)
--------->
AHL20(1)
--------->
ANAC58
<---------
AHL20(1)
--------->
ANAC46
<---------
ETT(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
MYB46(3)
--------->
YAB1
--------->
AHL20(2)
--------->
ANAC58
<---------
AHL20(2)
--------->
YAB1
<---------
AHL20(2)
------->
GAMYB
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
MYB52(2)
---------
TOE2(3)
--------->
At4g35610
--------->
AHL20(2)
--------->
MYB46(3)
ctgatgttttaaataatatttttctgctaaataataaacaaaaacatataaataaaaaaaatacacaaccacgaacgatcgacaattgggctcaatcgga
2894800
<---------
ARR14(2)
--------->
ARR14(2)
--------->
MYB52(1)
-------->
P
------>
ZmHOX2a(1)
<---------
ANAC58
<---------
AHL20(2)
<---------
ANAC58
--------->
AHL20(2)
<----------
DOF2
--------->
AHL20(2)
<------------
CBF
--------->
LBD16
--------
<-------
TEIL
----------->
GT1
<---------
DAG2
---------->
DOF2
<
----------->
RAV1(1)
<-----------
GT1
<---------
AHL20(2)
<---------
LBD16
--------->
At4g35610
tggaaaacccacatagcattcatttaattcatataaaaaccatttcagcgagaaaaaatgtaattgggcttttccttaccggatttgaaagtgagcccaa
2894900
<----
<-----
--------
<------
NtERF2
---------
--------->
DEAR3(1)
--------->
ATERF1(2)
--------->
RAP2.6(2)
--------->
RRTF1(3)
--------->
RRTF1(2)
--------->
DREB2C(2)
--------->
RAP2.3(2)
--------->
RAP2.3(3)
<---------
DEAR3(1)
--------->
RRTF1(1)
<------
NtERF2
--------->
ATERF1(1)
--------->
RAP2.6(1)
--------->
ORA47(2)
--------->
DEAR4(2)
--------->
ERF1
--------->
RAP2.3(1)
------>
NtERF2
--------->
ABI4(1)
<---------
At4g35610
<---------
ATERF1(1)
<---------
RAP2.3(1)
<---------
DREB2C(1)
--------->
At4g35610
<---------
DEAR4(2)
<---------
ATERF1(2)
<---------
ALFIN1
--------->
RAP2.3(3)
--------->
DEAR3(1)
--------->
ATERF1(2)
--------->
ANAC46
--------->
RRTF1(2)
--------->
RRTF1(3)
--------->
RAP2.6(2)
<---------
DEAR3(1)
--------->
RAP2.3(2)
--------->
ERF1
--------->
DEAR4(2)
--------->
ORA47(2)
--------->
RAP2.3(1)
--------->
RAP2.6(1)
--------->
ATERF1(1)
--------->
RRTF1(1)
<------
NtERF2
------>
NtERF2
-
<---------
ATERF1(1)
*
TSS
--------->
LBD16
<----------
ID1
--------->
ANAC46
--------->
CCA1(2)
---------->
DOF2
--------->
MYB46(3)
---->
CBF
--------->
AHL20(2)
---------->
ID1
---------->
DOF2
------>
NtERF2
---------
ARR11(3)
<---------
AHL20(2)
<---------
MYB52(1)
---------->
DOF2
<---------
ATERF1(1)
tagatataaaccctaagaactcagtaattaaagccc
aaaacgacaaaaccccgttttcttcgttttacttaaaagaaaacaaagctcccgccgccgccgt
2895000
<---------
SPL7
--------->
AtMYB61
--------
------>
NtERF2
---------
--------->
DEAR3(1)
<--------
-----
MYB52(1)
--------->
TOE2(3)
<----------
DOF2
---------
--
GAMYB
--------->
MYB46(3)
<---------
ALFIN1
---------
->
RAP2.3(1)
--------->
DEAR3(1)
<----------
DOF2
<----------
DOF2
<--------
>
ABI4(1)
<---------
ALFIN1
--------->
TOE2(3)
------->
TEIL
<---------
YAB1
<--------
-------->
YAB1
--------->
SPL7
<---------
TOE2(3)
<---------
CCA1(2)
---------->
DOF2
tatcacgacgaccaccgtgcgataccctaaatttcaacgttgattccactttgtcaagtttgtatctttcccactttgattccgatttgttaaagatttg
2895100
---------->
DOF2
----------------->
AGL1
->
CCA1(2)
<---------
ANAC58
---------->
DOF2
>
ARR14(2)
<---------
ANAC58
<---------
ARR14(2)
-
ARR14(2)
<---------
GLK1(1)
--------->
GLK1(2)
>
ARR11(1)
--------->
GLK1(1)
<---------
GLK1(2)
-
>
ARR11(3)
--------------->
AGL15
--------->
ZAT18
---------->
DOF2
<
-
ARR11(3)
<----------
DOF2
--------->
ATHB12
<---------
ARR14(2)
---------->
DOF2
=====================
-
GLK1(2)
<---------------
AGL15
<---------
ZAT18
<------
NtERF2
--------->
ARR14(2)
<-
cagattaaaagttttctttttgaagaaatcc
atgagtgcccaaatggaagaaccagagactctcggcaaaagaaaagaatctgaaagttcaaaacttcgt
2895200
------>
MYB83
------>
NtERF2
------>
MYB46(1)
--------->
DEAR3(1)
---------
--------->
ANAC58
--------->
AtMYB61
--------->
TGA1a
--------->
ANAC58
--------->
ANAC58
--------->
ANAC58
------>
NtERF2
--------->
ANAC46
<---------
ATERF1(1)
<---------
ZAT18
--------->
ATHB12
----------->
HVH21
<---------
ANAC46
<---------
ICU4
--------->
DEAR3(1)
<---------
ANAC58
-------->
HAHB4
------->
TEIL
<---------
ANAC58
--------->
YAB1
-------->
At4g35610
------->
MYC2
<---------
YAB1
------
---------
At4g35610
------->
MYC3
--------->
ICU4
-------
======================
bZIP_DOF
<-------
MYC2
<---------
ATHB12
-----
--------
YAB1
--------->
ANAC46
<---------
ANAC46
<-------
MYC3
------>
ZmHOX2a(1)
-------
tctgatgaaactccgacgccagaaccaagaacgaagcgtagaagtcttaaacgtgcttgtgtacatgaagttgctgttcctaatgattacacaccaacga
2895300
---------->
ID1
<---------
ARR14(2)
--------->
CCA1(2)
<---------
WRKY18(1)
<-
>
MYB52(1)
--------->
ANAC58
----------->
HVH21
------->
TEIL
->
GAMYB
--------->
ANAC58
<---------
TOE1(3)
--------->
ARR14(2)
-->
ANAC58
----------->
HVH21
<---------
TOE2(3)
<---------
CCA1(2)
----->
DOF2
--------->
ATHB12
<---------
O2
<----------
DOF2
<----------
DOF2
<-
-->
ANAC58
<-------
TEIL
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
---------->
DOF2
<-
aagaagagacgattcatgggacgcttgataatcctgtcttcaatggagacatggccaagacttatccttttaagcttgacccttttcaaagtgtatctgt
2895400
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AGI:
At2g06990.1
Description:
HEN2 (HUA ENHANCER 2); ATP-dependent helicase. similar to ATP-dependent RNA helicase, putative [Arabidopsis thaliana] (TAIR:AT1G59760.1); similar to hypothetical protein OsI_034105 [Oryza sativa (indica cultivar-group)] (GB:EAY80146.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66539.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ72204.1); contains InterPro domain Helicase, superfamily 1 and 2, ATP-binding (InterPro:IPR014021); contains InterPro domain DEAD-like helicase, N-terminal (InterPro:IPR014001); contains InterPro domain RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438); contai
Range:
from: 2894937
to: 2901075
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.