Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------------AtSPL8                                  ------                                       --------------->AtSPL3                                <-------                            <---------AHL20(2)                                 <---------AHL20(2)              <---------ANAC55(2)      --------------->AtSPL8    --------->AHL20(2)       --------->ARR11(3)              --------->ANAC55(2)     ---------->DOF2         --------->AHL20(2)          --------->AHL20(1)     --------->AHL20(2)     <---------AHL20(1)                <---------AHL20(1)          <---------AHL20(1)     <---------AHL20(2)     --------->AHL20(2)                --------->AHL20(1)     --------->AHL20(2)    --------->AHL20(2)     --------->AHL20(2)                 <---------AHL20(2)<---------AHL20(2)   <---------YAB1          <---------AHL20(2)              --------->YAB1      --------->AHL20(2) ---------AHL20(2)     <---------AHL20(2)        <---------AHL20(2)    <---------ANAC55(2)<---------ARR11(3) -------->AHL20(2)     --------->AHL20(2)       <---------AHL20(2)     ----------->GT1   --------->AHL20(2) --->ICU4 --------->ARR11(3)--------->AHL20(1)  --------->AHL20(2) --------->AHL20(2)<---------AHL20(2)   attttattaaaaaatcatgtgatattaaaataaatttagtaaaagtacaattaaatatgtataataaaataatatgtaaaattaaatataaatatatcat  1281400                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                      <---------bZIP60(2)                                                             --------->DAG2    --------->YAB1                                                           <xxxxxxxxxxxxxxxxsmallRNA(s)                                                          <xxxxxxxxxxxxxxxxsmallRNA(i)                                                         xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                         xxxxxxxxxxxxxxxx>smallRNA(s)                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                      --------->AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <xxxxx                                      <---------AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<xxxxxxx                                     --------->AHL20(2)xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   xxxxxxxx                                  <---------AHL20(2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxx                                  --------->ATHB51   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <xxxxxxxxx                                  <---------ICU4     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <xxxxxxxxx                                  --------->AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <xxxxxxxxx                                 --------->ICU4   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    <xxxxxxxxxx                               --------->YAB1     <-----------HVH21--------->ICU4        xxxxxxxxxxxx                              --------->AHL20(2)------->MYC3---------->DOF2 --------->WOX13(1)<xxxxxx --->TOE2(3)                  <---------AHL20(2)<-------MYC3xxxxxxxxxxxxxxxx>smallRNA(s)xxxxxxxxxxxxx --YAB1                     --------->TOE2(3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)   xxxxxxxxxxxxxx   taaactatagatttgaaattgaagagattacattaattatttaataaacacatgtcaaatgctaaagtgatgatgtgtctatcatatgaagagagttggc  1281500                                                               --------->CCA1(2)                                                           ==========================================            --------->AHL20(2)                             --------------->AGL15            <---------AHL20(2)                            <-----------------AGL1        --------->AHL20(2)                                <---------ANAC58 <----------DOF2                                          <-----------------AGL2 xxsmallRNA(se3)                                          <---------ANAC58 xxxxxxxxxxxsmallRNA(i)                                <----------DOF2 xxxxxxxxxsmallRNA(s)                               ------>ZmHOX2a(2) xxxxxxxxxxxxxxx>smallRNA(si3)                     <------ZmHOX2a(2) xxxxxxxx>smallRNA(se3)                            --------->GLK1(1) xxxxxxxsmallRNA(i)                                <---------GLK1(1) xxxxxxxsmallRNA(s)                               <---------ARR11(3) xxxxxxxxxxxxxxsmallRNA(si3)                      <---------ARR14(2)                         -------- xxxxxxsmallRNA(s)                                --------->ARR14(2)            --------->ANAC55(2) xxxx>smallRNA(i)  --------->ANAC46               --------->ARR11(3)            --------->ANAC58 xxxxxxxxxxsmallRNA(s)                            <---------AGP1                --------->ANAC58 xxxxxxxx>smallRNA(fl3)                           <---------ARR14(3)            <---------ANAC55(2) xx>smallRNA(s)  <-----------GT1   <----------ID1 --------->ARR14(3)            --------->ANAC46   caactttcatatatataatttacgaaaaaaaaaaaaaaaaacaaatattcaagatctctttcttgatatgggccaatttgatacgaaacattttccagcc  1281600                                                  <--------P                                 <-------                                                --------->ALFIN1                             <-------                                              <---------ANAC58                               <-------                   <---------LBD16            <---------ANAC46                             <---------ANAC58              <---------DAG2                  <---------ANAC58                             <---------ANAC46              <----------DOF2                <---------TOE2(3)                           <---------ANAC58              --------------->AGL15          <---------TOE1(3)                           <------MYB46(1)      <---------ANAC58                      <---------DOF5.7(2)                          <---------ANAC46      <---------ANAC58              --------->ATHB51         <---------TOE2(3)           <---------ANAC58  <---------DAG2  <-----------GT1  --------->ICU4--------->REM1(2)    <-----------GT1    <------MYB83 =============================MADS_MADS   --------->DOF5.7(2)--------->DAG2   <------MYB83 <---------ANAC58 ->ANAC46  <-----------GT1      ----------------->AGL1     <---------ATHB12   <------MYB46(1)--------   ataacctttcgttttactttatacgggctataggcccattatgggttaacgtgtaggcccaataaggtgttttttcaatttggtttgcatttggtgtgtg  1281700                                      --------->WOX13(1)                                  ----------->GT1                                 ------->MYC2                                 ------->MYC3                                 <-------MYC3                                 <-------MYC2                                <---------ANAC58        --------->At4g35610     <---------ANAC46        <---------At4g35610     <------NtERF2        <---------ZAT2          <---------ANAC58        <---------TOE1(2)                ------------    <-----------HVH21          ------>NtERF2           ------>ZmHOX2a(1)             --------->ANAC46 --ANAC58                     <---------ANAC46        --------->TOE2(2)       <---------HSFB2a(2) --ANAC46                     <---------ANAC58        --------->TOE1(2)       --------->HSFB2a(2) --ANAC58                  --------->ALFIN1--------->MYB52(1)             <---------ANAC58 ->ALFIN1   --------->REM1(1) <---------ANAC58----------->GT1             <---------ANAC58   tgtgtgtgtcagctacaatttctcaaggagaggcgcgtgtaaatcaaacggataatcctacggttttgatgaaatggcttctcgtagacctcacaatctc  1281800                                                                      ----------->GT1                             <---------HSFC1(1)               <----------DOF2<---------TOE2(3)                  --------->ANAC46    *TSS   <---------MYB59 --------->TOE1(3)                <-----------GT1  <-----------GT1             --------->TOE2(3)        <----------DOF2  --------->ARR11(3)         --------->HSFB2a(2)       ------>ZmHOX2a(1)     --------->MYB59  <---------ARR11(3)         <---------HSFB2a(2)      --------->TOE2(3)      <---------TOE1(3) >CBF       <----------DOF2  --------->HSFC1(1)       --------->TOE1(3)  <----------DOF2       ------   taaacatctcttctctttatacgctcttcttctagaaacctctcttacctcactctccttaaacctttaatagggtttttaggttactctttgttcaact  1281900                                                   <----------DOF2                                                --------->ARR11(3)                                                <---------ARR11(1)                                                <-----------ARR10                                           --------->TOE2(3)                                         <---------ARR11(3)                                         --------->ARR11(3)               <----------DOF2          --------->CCA1(1)             --------------->AGL15      --------->RVE1(1)                              <----------DOF2        <----------DOF2         ----------->GT1<---------CCA1(2)                    ------>ZmHOX2a(1) --->MYB46(3)<---------------AGL15    --------->AHL20(2)         <----------DOF2  <---------At4g35610   actacaaactcttttctctttagagattgagagattgtaaaaaaatctcaaatcttttccttcacaactttcaaatctaatggctcctgctttgagtaga  1282000                                                                                            <--------                                                                                            <--------                                                                                        <------NtERF2                                                                                        --------->ATERF1(1)                                                                                        --------->RAP2.3(1)                                                                                        --------->DEAR4(2)                                                                                       <---------DEAR4(2)                                                                                       <---------ERF1                                                                                       <---------RRTF1(1)                                                                                       <---------ORA47(2)                                                                                       <---------RAP2.6(1)                                                                                       <---------RAP2.3(1)                                                                                       ------>NtERF2                                                                                       <---------ATERF1(1)                                                                                      <---------RRTF1(2)                                                                                      <---------RRTF1(3)                                                                                      <---------RAP2.3(2)                                                                                      --------->DEAR3(1)                                                                                      <---------DEAR3(1)                                                                                      <---------RAP2.3(3)                                                                                     <---------ABI4(1)                                                                                    <---------ATERF1(1)                                                                                   ==================                                                                                   ==================                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                                   --------->TGA1a                                                                                   <---------TGA1a                --------->WRKY12        <---------CCA1(2)         --------->GLK1(2)--------->ANAC46 -              <----------DOF2         ------>ZmHOX2a(1)    ----------->RAV1(2)     --------->O2    --       --------->ANAC46        <---------ATHB12            <---------At4g35610   <---------ALFIN1 ---     <---------ALFIN1        --------->WOX13(1)   <---------CCA1(2)     <---------CCA1(2) ------>NtERF2    <---------REM1(2)<---------ZAT14----------->RAV1(2)    --------->At4g35610 <---------ALFIN1   <--   agtctctacacatctcctttgacttcagttccaatcactcctgtctcttctcgtctctctcatctgagaagctcgtttctcccacacggcggcgctttaa  1282100                                                                        <---------ANAC46                                                                        <---------ANAC58                                                                       <------NtERF2                                                                     <---------DEAR3(1)                                                                   =====================bZIP_DOF                                                                   <---------TGA1a                                                                   <---------ANAC46                                                                   --------->DEAR3(1)                                                                  <------NtERF2                                                                  --------->ATERF1(1)                                                                <---------DEAR3(1)                                                                --------->DEAR3(1)                                                                --------->RAP2.3(3)                                                                --------->RAP2.3(2)                                                                --------->RRTF1(3)                                                               --------->DEAR4(2)                                                               --------->ATERF1(1)                                                               <------NtERF2                                                               --------->RAP2.6(1)                                                               --------->RRTF1(1)                                                               --------->ERF1                                                               --------->RAP2.3(1)                                                               --------->ORA47(2)                                                              ------>NtERF2                                                              <---------RAP2.3(1)                                                              <---------ATERF1(1)                                                              <---------RRTF1(1)               <---------At4g35610                           <---------bZIP60(2)               --------->At4g35610                        ----------->HVH21  ---------->DOF2               <---------ZAT2                             ----------->TGA1   ========================         <---------ANAC58                                <-----------HVH21<------NtERF2         <---------ANAC55(1)                        <---------ZAT14--------->O2     <----------DOF2                                --------->ZAT14<---------O2    <---------ANAC58                               <---------MYB52(1)--------->ALFIN1    <---------ANAC58                               ----------->HVH21<-----------HVH21  --------->LBD16                                 --------->LBD16--------->ABI4(1) --------->DEAR3(1)                               <-----------HVH21--------->TGA1a -DAG2   <---------ANAC46                        <---------ANAC46------>NtERF2 --DOF2  <---------ANAC58                  <---------ARR14(2)<---------O2--------->LBD16 ==bZIP_DOF    --------->ZAT2         <-----------GT1   --------->ALFIN1<---------ANAC58 ==bZIP_DOF<---------REM1(1)---------->DOF2<---------GLK1(2) --------->bZIP60(1)    <---------ZAT14 -------->DEAR3(2)          =================================================bZIP_DOF ------->MYB52(1)       <---------HSFB2a(2)--------->ARR14(2)<---------bZIP60(1)    --------->ZAT18<- ------>ARR14(2)    <---------GLK1(2)----------->HVH21<---------ANAC46 <---------LBD16           <--- -------ARR14(2)<---------ANAC46   <---------REM1(1)--------->REM1(2)----------->HVH21   --------->ZAT14   gaaccggcgtttcgtgtagctggaatctcgaaaagagatgtaaccgattcgccgtgaagtgtgacgccgccgtggcggagaaagagaccactgaagaagg  1282200                               <------MYB83                               <------MYB46(1)                             --------->ALFIN1                           <---------TGA1a                           <---------bZIP60(2)                           <---------ANAC46                           <---------O2                           ======================bZIP_DOF <---------At4g35610       --------->ZAT2 <---------ZAT2            <---------ZAT2 --------->At4g35610      <---------AtMYB61 ================================================bZIP_DOF --------->ZAT2       <---------ZAT2        --------->ARR11(3) <---------ANAC55(2)  --------->At4g35610   --------->ARR14(2) <---------TGA1a      <---------At4g35610   <---------ARR14(2) --------->TGA1a      --------->ZAT2        <---------ARR11(3) <---------O2 <---------ANAC58 <---------DEAR3(2)  ---------->DOF2 --------->O2<---------------AtSPL8        <---------CCA1(2)                <---------ARR14(2)     -- ==========bZIP_DOF  ------>MYB46(1)     --------->YAB1                    <---------GLK1(1)    ----- ----------RAV1(2)   ------>MYB83     <----------DOF2                      <---------CCA1(2) -------- --------HVH21<---------ANAC58<---------MYB46(3)  ------>ZmHOX2a(1)   <---------LBD16   --------->ATHB12   gtcaggtgagaagtttgagtaccaagctgaggtgggttctctttcatatctcctaaagtttcaatcttgttttctgggtatctctcaacttgatggggat  1282300  Previous    Next  AGI:  At2g04030.1    Description:  CR88 (EMBRYO DEFECTIVE 1956); ATP binding. similar to ATP binding [Arabidopsis thaliana] (TAIR:AT3G07770.1); similar to hypothetical protein OsI_030703 [Oryza sativa (indica cultivar-group)] (GB:EAZ09471.1); similar to hypothetical protein OsI_028659 [Oryza sativa (indica cultivar-group)] (GB:EAZ07427.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15342.1); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594); contains InterPro domain Heat shock protein Hsp90; (InterPro:IPR001404) Range:  from: 1281838    to: 1286101    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.