Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                                 ----                                                                    <---------ANAC46             ----                      <---------ZAT14                             ------>NtERF2                  ----                      --------->ZAT18                          <---------ATERF1(1)               ----                      <---------ZAT18                <---------WRKY12                            ----                      --------->ZAT14                <---------WRKY45                            <---               ------>ZmHOX2a(1)                     <---------WRKY38(1)                    ---------         <---------ALFIN1                           <<<<<<<<<WRKY6--------->LBD16           ---------        <---------ZAT18                           --------->YAB1<---------LBD16     -----------------        <---------WRKY38(1)             --------->YAB1<---------DOF5.7(2)  <---------YAB1   ---------        --------->ZAT18                <---------ATHB12  ------->MYC3    --------->YAB1    --------->ZAT18 --------->RAV1(1) <---------ZAT6    --------->WOX13(1)  <-------MYC3   <---------YAB1     ------->TEIL   gccacattggtccactccttagagtgaacaccagtcttccaatcaaaatcaatagtcaacgtggtctccggcttataatcaatggcagtgatgcacgcta  893200 -------MYB59 ----->ANAC55(2) ----->ANAC55(1) ----->ANAC58                                                                                     --- ----->ANAC58                                                                               --------- ----->ANAC46                                                                             ------>MYB46(1) ------ANAC55(2)                                                <---------GLK1(2)         ------>MYB83 >ANAC58                                                   --------->AtLEC2       --------->bZIP60(1) >ANAC58    --------->YAB1            ------>MYB46(1)    <---------ANAC46         <---------bZIP60(1) ------>TaNAC69(2)                    ------>MYB83       <---------ANAC58        <------NtERF2   ---- >ANAC46   <---------YAB1       ----------->HVH21        <---------ANAC58   <---------AtMYB61  ------   cgtaactcccattttcataagcagtaaacgagaactgaccagcctctacattatcggcttcgtgcaaattcttcccttgtggtggcatcacctacaataa  893300                                                                                                   --                                                                                                 <---                                                                                                 ----                                                                                               <-----                                                                                    =================                                                                      ------>ZmHOX2a(2)      --------                                    ----------->ARR10                 ===========================HOX2a_HOX2a    <---------ARR11(3)     --------->WOX13(1)                         =====================HOX2a_HOX2a ---->GAMYB             --------->ARR11(3)                          <---------ARR11(3)    <------ZmHOX2a(1) >YAB1                  --------->GLK1(2)                           --------->ARR11(3)    =========== ----->MYB46(3)         <---------ARR11(3)                --------->TOE1(3)         <------ZmHOX2a(1) --->YAB1    --------->AHL20(2) <---------ANAC55(2)       --------->TOE2(3)    --------->GLK1(2) <---   ccacaagataacacattaaaaacaaaaatctatcaagtgagatttgtgatgaaatctataccttgacgatgatcttgtgagaatcaggaagaggatgatg  893400                                                    --------->ARR14(2)                                                    <-----------ARR10                                                    ------->TEIL       <---------TOE2(3)                            <---------ARR14(2)    <---------MYB52(1)                             <---------CCA1(2) ---->ZmHOX2a(2)                               <---------ANAC58                                  ---- --------ARR10                                 <---------ANAC58                             --------- ----->ARR11(3)                                <---------ANAC46                             --------- ----YAB1                                   <---------ARR14(2)          <---------ANAC58    --------- =====HOX2a_HOX2a                         <----------DOF2               <---------ANAC58    <-------- ->YAB1<---------TOE1(3)                 <---------ANAC58           ------->TEIL      --------->DOF5.7(2) =====HOX2a_HOX2a                        <---------ANAC58         <-------TEIL       <----------DOF2 ------ARR11(3)           <-----------GT1<---------ANAC46 ------>ZmHOX2a(1)  <---------HSFB2a(2) ----   atcttcgttagggtttacgatgaagtatttaccaatagacatggcgttttcgtgaatctcctcaccgatgcatttcgttttcgaagactttaactcgtaa  893500                                                                           --------->At4g35610                                                                           <---------LBD16                                                                        ----------->HVH21                                                                        <------NtERF2                                                                        --------->ATERF1(1)                                                                       <-----------HVH21                                                                       <-----------TGA1                                                                      <---------ANAC58                                                                      <---------bZIP60(1)                                                                      <---------TGA2(1)                                                                      <---------ANAC58                                                                      --------->TGA2(1)                                       --------->ANAC58               --------->bZIP60(1)                                       --------->ANAC58        <------ZmHOX2a(2)                          --------->ANAC58                     --------->CCA1(2)   --------->YAB1         --------->ANAC58                    <---------ARR11(3) ----->ANAC58--------->HSFB2a(2)     ---------->DOF2          --------->ARR14(2) >ANAC55(2)  <---------HSFB2a(2)--------->YAB1                --------->ARR11(3) >ANAC46 --------->ZAT18  --------->ANAC46                    <---------ARR14(2) >ANAC55(1) <---------LBD16    <---------ATHB12              --------->GLK1(1)  ---------->DOF2 -ANAC55(2)<---------ANAC46------->GAMYB          --------->ZAT2      <---------ANAC46            --- ----->ANAC58------>ZmHOX2a(1) --------->ICU4     <---------ZAT2<-------TEIL --------->LBD16     ----   cgcattgatagtgtcctgggagataacaacgcaatgatcaaaagcaaaatcgagcttcgacgaagatccatggcgtcaccggaaaagagaagagagagag  893600                                                                                      <---------AHL20(1)                                                                                      --------->AHL20(2)                                                                                  --------->AHL20(2)                                                                                  --------->ATHB51                                                                                  <---------ICU4                                                                                  <---------AHL20(2)                                                                                 --------->ICU4                                                                           <-------MYC4                                                                           ------->MYC4                                         <--------P                        ------->MYC2                                         ===========================================MYC_MYB                                     <---------ANAC58                      <-------MYC2                                     <---------ANAC46                      <-------MYC3                                     <---------ANAC58                      ------->MYC3--------->ATHB12                                  <---------MYB52(1)                      --------->TGA1a                                  <---------ARR14(2)                      <---------TGA1a                                 <---------RAP2.6(3)                      <---------O2<---------AHL20(2)                                <---------ANAC58                          --------->O2--------->AHL20(1)                                <---------ANAC58====================================bZIP_DOF                                <---------------AGL15                     <---------ANAC55(2)                               <-----------------AGL1             ==================bZIP_DOF    <---------ARR11(3)         ----------------->AG               ==================bZIP_DOF    --------->ARR11(3)         ----------------->AGL1             <----------DOF2<---------YAB1 --------->AHL20(2)            <-----------------AGL2   ============================bZIP_DOF     ---- -------->GT1                <-----------GT1    ---------->DOF2  --------->MYB52(2)--------->AHL20(1) ------->GT1    ------------>CBF--------------->AGL15   ---------->DOF2 <---------ALFIN1<------------CBF   agataaaatcttgcagtagtcaatgttttttttgccgtttcgggtaagacaaaagagtcaaagacgttctttgcacacgtgtaattattttattggtgaa  893700       <XXXXXXXXXXXXXXXXXXXXMIR399F       <XXXXXXXXXXXXXXXXXXXXMIR399D       <XXXXXXXXXXXXXXXXXXXXMIR399A  <-------MYC2  ------->MYC2  ------->MYC3  <-------MYC3 --------->ANAC58 --------->O2 <---------O2 --------->bZIP60(2) <---------TGA1a --------->TGA1a<----------DOF2 --------->ANAC58 <---------ANAC55(2) ==========================bZIP_DOF --------->ANAC55(2) --------->ANAC46                                                               <---------O2 ==========================bZIP_DOF                                        <----------DOF2          < ------------->PIF3(1) --------->ICU4  <----------DOF2                   ------->TEIL ------------>CBF   gacacgtgagcaagtcttctttgtcatgagcatagtatgggctttgtatatggaactgggcttagttttgtaatgaactttcacttggcacaatatttgg  893800                         --------->AHL20(2)         --------->LBD16                         <---------AHL20(2)       <-------TEIL                   --------->LBD16                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                  --------->ANAC46            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)               --------->ARR14(2)            xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)             --------->ARR11(3)           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)             <---------AHL20(1)       <-----------GT1          --------->GLK1(1)                  ---             <---------ARR11(3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)              <---------AHL20(2)          --------->AHL20(2)    --------->AHL20(2)<---------LBD16         <---------ARR14(2) <------- -----------TBP<---------ARR14(2)<---------AHL20(2)<---------HSFB2a(2)    --------->ARR14(2)<--------   gcttatatagattaatatatccgaaatttaaattttaaattttcaatataggtccggacattcagatttcatatcggattcagttcgaattttttttatt  893900                                                                             --------->GLK1(1)                                                                            --------->ARR14(2)                          --------->ZAT6                                    <---------ARR14(2)                         <---------YAB1              <------MYB46(1)     --------->ETT(1)                         <---------TOE2(3)           <------MYB83        <---------ANAC46                        <-----------GT1             <---------AtMYB61   <------NtERF2 -------->GT1   ----------->GT1             <---------ARR14(2)      <------MYB46(1) --AHL20(2)    --------->DAG2   <------ZmHOX2a(1)   --------->MYB59<---------AtMYB61 -AHL20(2)    ---------->DOF2  <---------YAB1     <---------MYB52(1)<------MYB83              <------   tggataattcggatgaaaaagtttattaacattaggattatatgactattcggtttggtttcacttcggatggtgtcggatttgtatgggtttcaaatca  894000                                                 --------->AHL20(2)                                 --------->AHL20(2)               <------MYB83                  <----                                 <---------AHL20(2)               <------MYB46(1)     ----------->GT1                                --------->YAB1   <---------AHL20(2)            <---------------AGL15                    <---------AHL20(2)       ----------->GT1      ----------->GT1   ---------->DOF2 ---ATHB12          --------->AHL20(2)--------->YAB1   <-----------GT1<---------AHL20(2)      -------   gtttttgagaaaaaaaaactaaaaaattgttcaattttaatcaaaaatcgtttaattttactaaaatttggtttaattttgcaaaacaaagtaaaattat  894100  Previous    Next  AGI:  At2g03040.1    Description:  transmembrane protein-related. similar to protein transmembrane transporter [Arabidopsis thaliana] (TAIR:AT2G03290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15017.1); contains InterPro domain emp24/gp25L/p24; (InterPro:IPR000348); contains InterPro domain GOLD (InterPro:IPR009038) Range:  from: 892822    to: 893571    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.