Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->ANAC46                          --------->DAG2                   --------->TOE2(3)                                        ---------->DOF2                   --------->TOE1(3)                                    <---------ZAT6      <---------At4g35610         <---------At5g28300         --------->TOE2(3)   aaaatttgagttgattcaaaactttaaacttacattcacagcattgctctgaaaaacaaaaaaaacttaaactagagataaagcttcaaaactaagtgat  672800                                                                ---------->DOF2                                                             --------->YAB1                    <-----                                                            <---------ATHB51     <---------At4g35610              --------->ZAT6 --------->ARR14(2)      <---------WOX13(1)   <----------DOF2      <-----          <---------MYB52(2) <---------ARR14(2)    --------->ATHB12   <---------CCA1(2)   <----------   tccaagttttgaactaacacttacattatcaaatccagtcgatgaagaacacttgattgacaataataaagcatctcttttgtagcttctattaaccctt  672900                                                              ------>MYB83                                                              ------>MYB46(1)                                                            --------->MYB46(3)                                                        ------>ZmHOX2a(1)                                                  <---------ARR11(3)                                                  <-----------ARR10      --------->ATHB12                                             --------->YAB1 <---------MYB52(2)              ---------                                            <---------ATHB12<---------MYB46(2)             <---------AHL20(2) ----DAG2                                   <<<<<<<<<ARR2  --------->ANAC46  <---------MYB46(3) -----DOF2                                --------->WOX13(1)--------->DEAR3(1)          ------->TEIL -GT1               ----------->GT1--------->YAB1 --------->ARR11(3)    <-------TEIL------->TEIL   ttcgaaaaatccagtttttgaactgaaaaatcaacattcagaaacaatcaaaaatctcctcaccgaaccagagattcattggtttgaacgtatataaaga  673000                                                                                <------NtERF2      --                                     --------->CCA1(2)                        <---------ANAC46     <-                        --------->At4g35610                                   --------->ETT(1)     --           <---------ANAC58    ----------->RAV1(1)        <---------TOE1(3) <-----------HVH21      <- ->DOF2    <---------ANAC58   --------->MYB46(3)      <----------DOF2      <-----------RAV1(1)   ----   gtatgagaaattgccttgagaacgatagctaaaccacagataagagttcaatttgactttaagcttcggacacagaaatgtcggagaagtaatgaagcca  673100                                                                           <---------AHL20(2)                                                                           <-----------TBP                                                           ------>ZmHOX2a(1) ----------->TBP      ----------->HVH21                                    <---------LBD16 --------->AHL20(2)    ----------->RAV1(2)                                <---------ARR14(2)----------->TBP <-------TEIL                                         *TSS <---------HSFB2a(2) ------->ARR11(1)                                     <---------MYB52(1)<---------ARR11(3) --------GLK1(2)                                     --------->LBD16    <---------AHL20(1) ------->ARR14(2)                            ---------->DOF2            --------->AHL20(1) --------ARR14(2)              ----------->RAV1(2) <---------LBD16 ------------>CBF               --- ------->ARR10           <-----------GT1  >>>>>>>>>TBF1--------->ARR14(2)--------->AHL20(2)   -------   agattcgtctgaagcatcgccatgttttatctcgcctgagagaagaagaaagctccggttcctcggagaaccaatatatatataaggccaactaaaaaca  673200                                                            --------->AHL20(2)                               --------->YAB1   <---------ICU4      --------->At5g28300          ----     <-----------HVH21        --------->ZAT6 --------->YAB1 ------------>CBF             ---------->DOF2 ------->DOF2               --------->YAB1 --------->AHL20(2)      ----------->GT1 ---------->DOF2 ----->CBF      --------->AHL20(2)       <----------DOF2<---------ATHB12   ----------->RAV1(1) ------   ataagcccatcaggcccattaaaaactcagtaatactaatgggcttttaataaggcccataattcaatacagtaaaacaacacaacaaagctaaagagaa  673300                                                                                            <--------                                                         --------->LBD16                    ---------                                                         ----------->GT1                    <--------                                                      -------->P      ------>NtERF2         ---------       --------->TOE2(3)                              --------->MYB52(1)          <---------ANAC46      ----------->GT1                   <---------ARR14(2)           <---------LBD16       --------->ANAC58      <---------ANAC55(2) --------->LBD16           --------->MYB46(3)--------->LBD16    <------ZmHOX2a(1)    *TSS                  ----------->GT1          <---------KAN4(2)<---------LBD16 --------->ALFIN1 ------->GT1            <---------LBD16 --------->ARR14(2)--------->At5g28300 >>>>>>>>>NAM --------->ANAC58 ---->DOF2             --------->MYB52(1)    <---------MYB52(1)   <-----------GT1--------->ATHB12   agaaaaaaacgtaaaaatcgaagaagaccggagaaaatggcgaaaccgttgggaacaaccggtgaatttttccggcgaagggatgagtggaggaagcatc  673400                                                                                     ================                                                                                     ------>ZmHOX2a(2)                                                                                    <------ZmHOX2a(2)                                                                                    =================                                                  <------MYB83                     --------->ARR14(2)                                                  <---------MYB46(3)               --------->ARR11(3)                                                  <------MYB46(1)                  <---------AGP1                                   --------->MYB52(1)------>NtERF2                 <---------ARR11(3)                               --------->LBD16  <--------P                         <---------ARR14(2)                              --------->HSFB2a(2)<---------AtMYB61           <---------ZAT14                         ------->TEIL         <-----------RAV1(1)         <---------DEAR3(2)                        <---------ALFIN1      --------->ALFIN1           <---------At1g77200 -HSFB2a(1)           --------->ANAC58  <---------ARR14(2)               <---------DEAR3(1) >HSFC1(2)            --------->ANAC55(2)--------->GLK1(2)             <-----------HVH21 -HSFC1(2)            --------->ANAC58  --------->ARR14(2)      --------->WRKY12   --------->AGP1 >HSFB2a(1)           --------->ANAC46  <---------GLK1(2)    <---------ANAC46--------->ZAT14   cgatgctatcgaatcaaatgagacacgcacttccaggtatcggaatcggtgttggtgccttctgcgtttacctcgtcggtgaacagatctatagcaaact  673500                                                                      --------->AHL20(2)                                                               <---------ANAC55(2)                                                               ----------->GT1                                                               <------MYB46(1)                                                               <------MYB83           --------->HSFC1(1)                                                          -------->ATHB1              --------->HSFB2a(2)                 <---------ICU4          <---------ALFIN1 <--------HAHB4        <---------ARR11(3)                 --------->YAB1      --------->At4g35610  --------->YAB1        --------->ARR14(2)                <---------ATHB12    --------->ANAC46      --------->ATHB12      <---------ARR14(2)              --------->WOX13(1)   ------->GAMYB          <---------ICU4        --------->ARR11(3)      ------>ZmHOX2a(1)          -------->P              --------->ICU4--------->YAB1 <---------HSFB2a(2) ============HOX2a_HOX2a       --------->MYB46(3)       --------->GLK1(2)       <-----------ARR10   < ============HOX2a_HOX2a--------->At4g35610<---------At4g35610--------->MYB59  <---------CCA1(2)    <   catggctccttcttctcaatcatcgcatcagaaacaacccgctccatctcactgagagaatcattaggtaaaataaaaatcaaatcttctcgaatttgtt  673600               <---------CCA1(2)         ----------->GT1                                                                <---------ANAC55(2)        <---------TOE2(2)                                                               --------->O2        <---------TOE1(2)                                                               --------->TGA1a    <---------LBD16                                                                     <---------O2    --------->HSFB2a(2)                                                             <-----------HVH21    <---------HSFB2a(2)            <---------ZAT14                        --------->ARR11(3)    <---- <----------DOF2               <-----------GT1    ----------->GT1         <---------ARR11(3)  <------ ---------ANAC58    ------>ZmHOX2a(1)         --------->ATHB12        ---------->DOF2   <---------TGA1a ---------ANAC58   --------->TOE2(3)     ----------->HVH21            ============================bZIP_DOF   ttgcttctcggaggtttatatcctaaatcgatttgacttctctgtgaaagattggataaacaaaaactttggcaaagttcttagaatgtcacgtttgagg  673700  Previous    Next  AGI:  At2g02500.1    Description:  ISPD (2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLTRANSFERASE). Identical to 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplast precursor (ISPD) [Arabidopsis Thaliana] (GB:P69834;GB:O64726;GB:Q9LL91); similar to 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Hevea brasiliensis] (GB:BAF98292.1); contains InterPro domain 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; (InterPro:IPR001228) Range:  from: 670877    to: 673154    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g02510.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G14450.1); similar to unknown [Populus trichocarpa] (GB:ABK94107.1) Range:  from: 673304    to: 674739    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.