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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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          --------->LBD16
        <---------LBD16
        ------>ZmHOX2a(2)
       --------->CCA1(2)
       --------->ARR14(1)                                            <---------At4g35610
       <------ZmHOX2a(2)                                             --------->ZAT2
      <---------ARR14(2)                                             <---------ZAT2
      --------->ARR14(2)                                             --------->At4g35610
      --------->ARR11(3)                                            --------->MYB52(2)
      --------->ARR11(1)                                          <---------MYB52(1)
      --------->AGP1                                            <------MYB46(1)
    ----------->ARR10                                      --------->ATHB12
-------AHL20(2)                <----------DOF2            <---------YAB1 ----------->ARR10   <------
------>AHL20(2)     <---------AHL20(2)        ------>ZmHOX2a(1) <------MYB83 ----------->RAV1(2)
 
ttaaatttagatccggtttccatttttttgatgactttggtttgttttcctattactaattttgatttggttagctgagagcctgagactgagaggcttt  29847300
                                                                 <---------MYB52(1)
                                                         --------->ANAC46
                                                       <-----------GT1
                                                       --------->MYB52(1)
                                                     <---------AHL20(2)
                                                     --------->AHL20(2)  --------->ALFIN1
                   <---------At4g35610        ----------->GT1  <---------ANAC46
                   --------->At4g35610      <---------ANAC46  <------NtERF2           --------->MYB59
       <----------DOF2      --------->YAB1  <---------ANAC58 ------>NtERF2      <---------RAP2.6(3)
      <---------DAG2 ----------->HVH21      <---------ANAC58<---------ARR14(2)  <------NtERF2 <-----
----DOF2     <---------ANAC46           <-----------RAV1(2) --------->ARR14(2) --------->RAP2.6(2)
 
gttgatgacccttttgtcttggagatgacaatgagcatcaaacccaggcgtgttaattaaacggctccgtttacaagttgggccgaaattaggcctcttg  29847400
                                                            -------->HAHB4
                               <---------TOE2(3)            <---------ICU4
                              --------->MYB52(1)            --------->YAB1
                         <---------YAB1                    --------->ICU4
          --------->ATHB12    <-----------GT1            --------->YAB1                    <--------
------RAV1(1)            --------->AHL20(2)           --------->YAB1                      <------NtERF2
 
ttgggcttaaacctgattagtttttcttataaataacgtttttttttgttttggtaagaataataatgctcatttgtgagtcagtgactagtcgtcgtgc  29847500
                                        <-----------HVH21
                                        <-----------TGA1
                                       --------->O2                        <---------CCA1(2)
                                       <---------O2                        --------->GLK1(1)
                                       --------->ANAC58               <---------LBD16
   ----------->HVH21                   <<<<<<<<<<AtbZIP1          --------->ARR14(2)
 <---------O2                          --------->ANAC58           <---------ARR14(2)  --------->AHL20(2)
 <---------ANAC55(2)                   --------->ANAC46       <---------LBD16        <---------ATHB12
 <---------ANAC58                      --------->bZIP60(2)   <---------ANAC58      --------->WOX13(1)
 ----------->GT1                       --------->TGA1a   <---------------AGL15   ------------>CBF
 --------->ANAC55(2)                   <---------TGA1a ----------------->AGL1    <---------ATHB12
 <---------ANAC58                      --------->bZIP60(1)   <---------ANAC46  --------->WOX13(1)
-ANAC46                                <---------bZIP60(1)   <---------ANAC58------------>CBF      -
 
aataacgtgacaataaacaaaaaatcaaacaaatccaatgccacgtcagacaatacattccaattcgtggaaacgcgcatatcaatcaatgaaatgaatg  29847600
                                <---------AHL20(1)
                                --------->AHL20(1)
                           --------->AHL20(1)
                      --------->AHL20(2)             <---------AtMYB61                    --------->GLK1(2)
                    ----------->GT1    --------->ARR11(3)                              <---------GLK1(2)
          --------->TOE2(3)--------->AHL20(2)     <---------DAG2                  ------>NtERF2
          --------->YAB1  --------->YAB1<------ZmHOX2a(2)      *TSS              ----------->HVH21
          --------->TOE1(3)<---------AHL20(1)------>ZmHOX2a(2) --------->YAB1  <---------At4g35610
 ----------->GT1   --------->DAG2      <---------ARR11(3)--------->ETT(1)      --------->At4g35610
--------->DOF2    ---------->DOF2--------->CCA1(2)<----------DOF2             ------>ZmHOX2a(2) <---
 
aataaagaaataatcttagccaaaagtaaatataatatataagatcgatctcacttttggtcggaataagaagctattggatcgctgacagataatccga  29847700
                                                         --------->ATHB12
                                                        <----------DOF2                        -----
                                                    <------NtERF2                             <-----
                                                   <---------DEAR4(2)                         <-----
                                                   <---------ORA47(2)                        <------
                                                  --------->ALFIN1                           <------
                                                  <---------DREB2C(2)                       --------
                                                  <---------DEAR3(1)            --------->MYB46(3)
                               <-----------GT1 --------->DAG2      --------->WOX13(1)   <------NtERF2
  <-------TEIL          <------ZmHOX2a(2)     --------->DAG2     <------ZmHOX2a(2)     --------->LBD16
<---------GLK1(2)      <---------ARR11(3)    ---------->DOF2     ===================HOX2a_HOX2a<----
<---------ARR14(2)     --------->ARR11(3)<----------ID1 <---------YAB1       <------ZmHOX2a(1)<-----
--------->ARR14(2) <------ZmHOX2a(2)  <---------ATHB12 <---------ANAC58    --------->LBD16 <--------
---ZmHOX2a(2)     <-----------HVH21   ----------->TGA1 <---------ANAC58   <---------LBD16-----------
 
tcagattcagagagttttatcgatcagatcattttttctcaatgacgaaaaaggcggtgcttattgggatcaattacccaggaaccaaggcggagttacg  29847800
     <---------WRKY12
     <---------WRKY38(1)
    --------->DOF5.7(2)
   <-----------HVH21
  <---------ANAC58                                       <---------HSFB2a(2)
  <---------ANAC46                                <---------GLK1(2)
  <---------ANAC58                             --------->ANAC58
 <-------TEIL                                  --------->ANAC58
---->LBD16                                     <---------RAP2.6(2)
----ANAC58                                    --------->SPL7
----ANAC58                                    --------->SPL1(2)
---LBD16                                      --------->RAP2.6(3)
-----------------TaNAC69(2)                 <---------SPL7  <------ZmHOX2a(1)
->CCA1(2)                                 <---------------AtSPL3                                ----
-----LBD16           <---------TOE1(2)    --------------->AtSPL3                            <-------
----ANAC46           <---------TOE2(2)--------->WRKY12   --------->HSFB2a(2)                --------
-ARR14(2)     <-------TEIL            --------->WRKY38(1)--------->LBD16            ------>NtERF2  <
>ARR10<---------DOF5.7(2)          <---------ANAC46<----------DOF2          <---------YAB1  ------->TEIL
 
gggatgcgtcaacgatgttcgtcgtatgtacaaatgtctcgttgaacggtacggcttctccgaggagaacatcaccgttctcatcgacaccgatgaatcc  29847900
                                                                 ------>NtERF2
                                                                <---------DEAR3(1)
                                                                ----------->HVH21
                                                                --------->DEAR3(1)
                             <---------ZAT18                   --------->ATERF1(1)
                           ------>NtERF2                      --------->LBD16
                           <------NtERF2                      ------>NtERF2
                          --------->DEAR3(1)                <---------LBD16
                         <---------DEAR3(1)               --------->GLK1(2)                       --
                         --------->ATERF1(1)              <---------ARR14(2)                    <---
                        --------->LBD16                  --------->ARR14(2)                   ------
                        ------>NtERF2             --------->HSFB2a(1)                         ------
                      --------->MYB46(3)         --------->ARR14(2)                           ------
                    --------->ARR14(2)           <---------ARR14(2)                           ------
    <---------At4g35610--------->ANAC46          <-----------ARR10     <---------ANAC58    <--------
    --------->At4g35610------->GAMYB             ------->TEIL<---------LBD16               <--------
--------->ANAC46    <---------ARR14(2)           <---------ARR11(1)    <---------ANAC58  <---------ZAT18
-->ZmHOX2a(1)      --------->HSFB2a(1)           --------->GLK1(2)<------NtERF2          --------->ZAT14
--ARR14(2)     --------->ANAC58          ------>ZmHOX2a(2)--------->ARR14(2)        <---------ZAT14<
->ARR14(2)     --------->ANAC58    <---------At4g35610----------------->AGL1        --------->ZAT14<
---------REM1(2)   <---------HSFB2a(1) --------->ARR11(3)<---------ARR14(2)---------->ID1<---------ZAT14
 
tctactcagcctactggcaagaacatccgccgcgcgcttgctgatctcgtcgaatctgccgattccggcgacgttcttgtcgttcattacagtggacacg  29848000
          <------NtERF2
          <---------At4g35610
         ------>NtERF2
        --------->ATERF1(2)
        <---------RAP2.6(2)
        <---------ATERF1(2)
       <---------LBD16
       <---------ANAC58
       <---------ANAC58
       --------->ATERF1(1)
       --------->RAP2.6(3)
      <---------ATERF1(1)
    <--------P
------->SPL7
------SPL7--------->At4g35610
--->ANAC58----------->RAV1(2)
--->ANAC58<---------ZAT2                                                  <---------YAB1
--->ANAC55(1)                                                          --------->GLK1(2)
--->ANAC46--------->ZAT2                                   <---------ANAC46
-ARR14(2)--------->LBD16                                   <---------ANAC58
-REM1(2)<---------RAP2.3(2)                                <---------ANAC58
---------TOE1(1)                                          --------->MYB52(2)                <-------
---------TOE2(1)              ----------->HVH21   <---------ZAT14      ------->TEIL        <--------
 
gtacgaggttgccggctgagactggtgaagacgatgacactggtttcgacgagtgtattgttccttgcgacatgaatctgattactggtgagttttatct  29848100
                                          --------->ICU4
                                        --------->YAB1
                                       <---------YAB1
                                     ------>ZmHOX2a(1)
                                  <<<<<<<<<ARR1
                                  <------ZmHOX2a(2)
                                  <<<<<<<<<ARR2
                                 <---------ARR11(3)  --------->ARR11(3)
                            ----------->HVH21        <---------ARR11(3)
                           =================HOX2a_HOX2a
                          ==================HOX2a_HOX2a
                          <------ZmHOX2a(2)     --------->At4g35610
               --------->ATHB12  --------->ARR14(2)  --------->GLK1(2)
             <---------WOX13(1)  <---------ARR14(2) <---------GLK1(2)
 <----------DOF2         --------->ARR14(2)<---------ICU4                <---------YAB1         ----
----GT1    --------->ATHB12------>ZmHOX2a(2)  --------->YAB1       --------->DAG2             ------
---GT1    <---------YAB1 <---------ARR14(2)--------->YAB1         ---------->DOF2             <-----
 
ctctcttttttttgtgattgatggctacgatctgacgatcctataataatcagaagaatcttttgatggaaaagttttgattttttgtagaattgttgat  29848200
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AGI:  At1g79340.1   
Description:  ATMC4 (METACASPASE 4); caspase/ cysteine-type peptidase. similar to AMC6/ATMC5/ATMCP2B (TYPE-II METACASPASES), caspase/ cysteine-type endopeptidase [Arabidopsis thaliana] (TAIR:AT1G79330.1); similar to latex-abundant protein [Hevea brasiliensis] (GB:AAD13216.1); contains InterPro domain Peptidase C14, caspase catalytic; (InterPro:IPR011600)
Range:  from: 29847664    to: 29849531    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.