Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->LBD16         <---------LBD16         ------>ZmHOX2a(2)        --------->CCA1(2)        --------->ARR14(1)        <------ZmHOX2a(2)       --------->ARR11(1)       <---------ARR11(2)       --------->ARR14(2)       --------->AGP1       <---------RVE1(2)       --------->ARR11(2)       <---------ARR14(2)       --------->ARR11(3)       <---------GATA12       --------->GATA12     ----------->ARR10 <---------WOX13(2)                                                   <---------ZAT2 --------->WOX13(2)                                                   --------->ZAT2 -------AHL20(2)                                                      <---------At4g35610 ------>AHL20(2)                                                      --------->At4g35610 -------AHL12(3)                                                     --------->MYB52(2) -------AHL25(3)                                                   <---------MYB52(1) ------>AHL25(3)                                                 <------MYB46(1) ------>AHL12(3)                                             <---------RVE1(2) -------AHL25(1)                <----------DOF2             --------->ATHB12 ------>AHL25(1)     <---------AHL20(2)                    <---------YAB1 ----------->ARR10   <------ ----WOX13(2)       <---------DOF5.7(1)        ------>ZmHOX2a(1) <------MYB83 ----------->RAV1(2)   ttaaatttagatccggtttccatttttttgatgactttggtttgttttcctattactaattttgatttggttagctgagagcctgagactgagaggcttt  29847300                                                                  <---------MYB52(1)                                                                <---------ANAC46                                                               <------NtERF2                                                          --------->ANAC46                                                        --------->MYB52(1)                                                        <-----------GT1                                                      --------->AHL20(2)                                                      <---------AHL25(1)                                                      <---------AHL20(2)                                                    --------->AHL12(2)                    <---------At4g35610             <---------AHL12(2)                    --------->At4g35610             <---------WOX13(2)                 --------->MYB59                   <---------RVE1(2)                --------->WOX13(2)    --------->ALFIN1        <----------DOF2--------->YAB5          ----------->GT1------>NtERF2         --------->WOX13(2)        <---------DOF5.7(1)                  <---------ANAC58<---------ARR14(2)     <---------WOX13(2)       <---------DAG2 ----------->HVH21      <---------ANAC46--------->ARR14(2)  <------NtERF2 <-----       <---------DOF5.7(1)   --------->YAB1  <---------ANAC58<---------ARR11(2)  <---------RAP2.6(3) ----DOF2     <---------ANAC46           <-----------RAV1(2) --------->ARR11(2) --------->RAP2.6(2)   gttgatgacccttttgtcttggagatgacaatgagcatcaaacccaggcgtgttaattaaacggctccgtttacaagttgggccgaaattaggcctcttg  29847400                                                             --------->YAB1                                                             <---------ICU4                                                             -------->HAHB4                                                            --------->ICU4                                                           <---------AHL20(3)                                                           <---------AHL25(2)                                      --------->AHL12(2)   <---------AHL12(2)                                    <---------DOF5.7(1)    --------->AHL25(2)                                <---------TOE2(3)          --------->AHL20(3)                               <-----------GT1            --------->YAB1                    <--------                          --------->AHL20(2)              --------->AHL12(2)               <------NtERF2           --------->ATHB12    --------->MYB52(1)        <---------KAN1                 <---------YAB5 ------RAV1(1)            <---------YAB1               --------->YAB1             --------->YAB5   ttgggcttaaacctgattagtttttcttataaataacgtttttttttgttttggtaagaataataatgctcatttgtgagtcagtgactagtcgtcgtgc  29847500                                         <-----------TGA1                    --------->RVE1(2)                                         <-----------HVH21                  <---------CCA1(2)                                        <---------TGA1a                     --------->GLK1(1)                                        --------->O2                        <---------KAN1                                        <---------O2                   <---------LBD16                                        --------->TGA1a            --------->ARR11(2)                                        <---------bZIP60(1)        <---------ARR14(2)    ----------->HVH21                   --------->ANAC58           <---------ARR11(2)  <---------ANAC58                      --------->bZIP60(1)    <---------LBD16         --------->AHL20(2)  --------->ANAC55(2)                   <<<<<<<<<<AtbZIP1     <---------ANAC58      --------->WOX13(1)  ----------->GT1                       --------->ANAC46      <---------ANAC46    ------------>CBF  <---------ANAC55(2)        <---------GATA12             <---------------AGL15   <---------ATHB12  <---------O2               --------->RVE1(2)      --------->KAN1 --------->ARR14(2) <---------ATHB12  <---------ANAC58  --------->RVE1(2)   --------->ANAC58----------------->AGL1  --------->WOX13(1)  - -ANAC46          <---------AHL12(1)    --------->bZIP60(2)   <---------ANAC58------------>CBF  -----   aataacgtgacaataaacaaaaaatcaaacaaatccaatgccacgtcagacaatacattccaattcgtggaaacgcgcatatcaatcaatgaaatgaatg  29847600                                            <---------GATA12                                        --------->GATA12                                        <---------GATA12                                 <---------AHL20(1)                                 --------->AHL20(1)                            --------->AHL20(3)                            <---------AHL20(3)                            <---------AHL25(2)                            --------->AHL25(2)                       --------->AHL20(2)   --------->GATA12                               --------->GLK1(2)           --------->TOE1(3)--------->AHL25(1)                                           --------->KAN1           --------->TOE2(3)--------->AHL20(1)                                          <---------GLK1(2)           --------->YAB1   <---------AHL20(1)                                          <---------RVE1(2)       --------->KAN1----------->GT1    --------->ARR11(3)      *TSS               ------>NtERF2       --------->AHL25(1)   --------->AHL25(3)        <---------AtMYB61           ----------->HVH21       --------->AHL12(1)   <---------AHL25(3)     <----------DOF2              --------->At4g35610       <---------AHL12(1)   --------->AHL20(2)------>ZmHOX2a(2) --------->YAB1  <---------At4g35610  ----------->GT1   --------->DAG2      <---------ARR11(3)     <---------KAN1  ------>ZmHOX2a(2) <--- --------->DOF2    ---------->DOF2--------->CCA1(2)<---------DAG2            <---------GATA12   ----- ---->YAB5<---------YAB5   --------->YAB1<------ZmHOX2a(2)--------->ETT(1)   --------->GATA12   <----   aataaagaaataatcttagccaaaagtaaatataatatataagatcgatctcacttttggtcggaataagaagctattggatcgctgacagataatccga  29847700                                                          --------->ATHB12                                                     <------NtERF2                              -----                                                    <---------ORA47(2)                         <-----                                                    <---------DEAR4(2)                         <-----                                                   <---------DEAR3(1)                         <------                                                   --------->ALFIN1                           <------                                                   <---------DREB2C(2)           --------->MYB46(3)                                                --------->DOF5.7(1)            <---------ARR11(2)   -   <-------TEIL                                --------->DOF5.7(1)   <---------WOX13(2)      -------- <---------GATA12               <-----------GT1--------->DAG2        --------->WOX13(2)     <-------- --------->GATA12            <---------DOF5.7(1)--------->DAG2      --------->WOX13(1)   <------NtERF2 --------->ARR14(2)      <------ZmHOX2a(2)    --------->DOF5.7(1) <------ZmHOX2a(2)     --------->LBD16 <---------ARR14(2)     --------->ARR11(3)    ---------->DOF2     ===================HOX2a_HOX2a<---- <---------GLK1(2)      <---------ARR11(3)<----------ID1 <----------DOF2       --------->ARR11(2)   < ---ZmHOX2a(2)          --------->GATA12--------->YAB5   <---------YAB1       <------ZmHOX2a(1)<----- ---->GATA12        <------ZmHOX2a(2)  ----------->TGA1 <---------ANAC58    --------->LBD16 <-------- -----GATA12       <-----------HVH21   <---------ATHB12 <---------ANAC58   <---------LBD16-----------   tcagattcagagagttttatcgatcagatcattttttctcaatgacgaaaaaggcggtgcttattgggatcaattacccaggaaccaaggcggagttacg  29847800      <---------WRKY38(1)      <---------WRKY12     --------->DOF5.7(2)    <-----------HVH21   <---------ANAC58                                          <------ZmHOX2a(1)   <---------ANAC46                                       --------->LBD16   <---------ANAC58                                <---------GLK1(2)  <-------TEIL                                  --------->ANAC58 ---->LBD16                                     <---------RAP2.6(2) ----ANAC58                                     --------->ANAC58 ----ANAC46                                    --------->SPL7(1) ---LBD16                                      --------->RAP2.6(3) -----------------TaNAC69(2)                   --------->SPL1(2) -------->ARR11(2)                            --------->ARR11(2)                                 ---- ->CCA1(2)                                    <---------ARR11(2)                             <------- -ARR14(2)                                 --------------->AtSPL3                            -------- -----LBD16           <---------TOE1(2)    <---------------AtSPL3                            ------->TEIL ---------ARR11(2)    <---------TOE2(2)--------->WRKY12   --------->HSFB2a(2)                -------- ----ANAC58    <-------TEIL            --------->WRKY38(1)<---------HSFB2a(2)                <------- -ARR11(2)  --------->KAN1          <---------ANAC46<----------DOF2          <---------YAB1--------->YAB5 >ARR10<---------DOF5.7(2)     <---------KAN1<---------SPL7(1)    <---------KAN1     ------>NtERF2  <   gggatgcgtcaacgatgttcgtcgtatgtacaaatgtctcgttgaacggtacggcttctccgaggagaacatcaccgttctcatcgacaccgatgaatcc  29847900                                                                 ----------->HVH21                                                                 --------->DEAR3(1)                                                                --------->ATERF1(1)                                                               --------->LBD16                                                               ------>NtERF2                                                             <---------LBD16                              <---------ZAT18              --------->ARR14(2)                            ------>NtERF2                  --------->ARR11(2)                            <------NtERF2                  --------->GLK1(2)                           --------->DEAR3(1)              <---------ARR11(2)                          --------->ATERF1(1)      --------->HSFB2a(1)                          <---------DEAR3(1)       <---------KAN1<---------DEAR3(1)                         ------>NtERF2            <---------ARR14(2)                               --                         --------->LBD16          --------->ARR11(2)                             <---                       --------->MYB46(3)         --------->GLK1(2)                            ------                     <---------ARR14(2)           --------->GATA12                             ------                     --------->ARR14(2)           --------->ARR14(2)    <---------ANAC58       ------                     <---------GATA12             <---------GATA12------>NtERF2             <--------     <---------At4g35610--------->ANAC46          <---------ARR11(2)    <---------ANAC58    <--------     --------->At4g35610------->GAMYB             <-----------ARR10<------NtERF2            <-------- --------->ANAC46    --------->GATA12             <---------ARR11(1)--------->KAN1        --------->ZAT14 -->ZmHOX2a(1)      --------->KAN1                ------->TEIL<---------LBD16             <---------ZAT18 --ARR11(2)         --------->HSFB2a(1)   ------>ZmHOX2a(2)<---------ARR14(2)        --------->ZAT14 ->ARR14(2)         <---------HSFB2a(1) <---------GATA12  <---------ARR11(2)         <---------ZAT14< ->ARR11(2)     --------->ANAC58        --------->GATA12  --------->ARR14(2)      <---------WOX13(2)< --ARR14(2)     --------->ANAC58        --------->ARR11(3)<---------ARR14(2)---------->ID1<---------ZAT14 ---------REM1(2)   <---------KAN1  <---------At4g35610----------------->AGL1    --------->YAB5------   tctactcagcctactggcaagaacatccgccgcgcgcttgctgatctcgtcgaatctgccgattccggcgacgttcttgtcgttcattacagtggacacg  29848000           <------NtERF2           --------->ZAT2           ----------->RAV1(2)         <---------RAP2.3(2)         <---------RAP2.6(2)         --------->ATERF1(2)        <---------ANAC58        --------->ATERF1(1)        <---------ANAC58        <---------LBD16        --------->RAP2.6(3)       <---------ATERF1(1)     <--------P ------->SPL7(1) ------SPL7(1) --->ANAC55(1) --->ANAC58<---------At4g35610                                             <---------YAB1 --->ANAC58--------->At4g35610                                          --------->GLK1(2) -REM1(2)<---------ATERF1(2)                                <---------ANAC58 -ARR14(2)------>NtERF2                                     <---------ANAC58 -ARR11(2)--------->LBD16                                   <---------ANAC46--------->YAB5 ---------TOE2(1)                                          --------->MYB52(2) ---------TOE1(1)              ----------->HVH21   <---------ZAT14      <---------GATA12     <------- --->ANAC46<---------ZAT2    --------->YAB5       <---------KAN1        ------->TEIL        <--------   gtacgaggttgccggctgagactggtgaagacgatgacactggtttcgacgagtgtattgttccttgcgacatgaatctgattactggtgagttttatct  29848100                                           --------->ICU4                                          --------->AHL20(3)                                         --------->YAB1                                        <---------YAB1                                      ------>ZmHOX2a(1)                                   <------ZmHOX2a(2)                                   <<<<<<<<<ARR2                                   <<<<<<<<<ARR1                                  --------->ARR14(2)                                  --------->ARR11(2)                                  <---------ARR14(2)  <---------ARR11(3)                                  <---------ARR11(2)  --------->ARR11(3)                             ----------->HVH21   --------->At4g35610                            ------>ZmHOX2a(2)  --------->YAB1                           ==================HOX2a_HOX2a                --------->ATHB12  <---------GATA12    --------->GLK1(2)              <---------WOX13(1)  <---------ARR11(3) <---------GLK1(2)            --------->ATHB12=================HOX2a_HOX2a<---------DOF5.7(1)   <---------DOF5.7(1)     <------ZmHOX2a(2)  <---------YAB5                  --------->AHL12(1) ----  <----------DOF2         --------->GATA12<---------AHL25(2)                <---------RVE1(2)  <----- <---------DOF5.7(1)      <---------GATA12<---------AHL20(3)              <---------YAB1       <----- ----GT1   <---------YAB1 <---------ARR14(2)--------->YAB1          --------->DAG2             ------ ---GT1    <---------YAB5 --------->ARR14(2)<---------ICU4         ---------->DOF2             <-----   ctctcttttttttgtgattgatggctacgatctgacgatcctataataatcagaagaatcttttgatggaaaagttttgattttttgtagaattgttgat  29848200  Previous    Next  AGI:  At1g79340.1    Description:  ATMC4 (METACASPASE 4); caspase/ cysteine-type peptidase. similar to AMC6/ATMC5/ATMCP2B (TYPE-II METACASPASES), caspase/ cysteine-type endopeptidase [Arabidopsis thaliana] (TAIR:AT1G79330.1); similar to latex-abundant protein [Hevea brasiliensis] (GB:AAD13216.1); contains InterPro domain Peptidase C14, caspase catalytic; (InterPro:IPR011600) Range:  from: 29847664    to: 29849531    Orientation: Forward Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.