Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------ZAT14                                                      <---------ZAT18                                                      --------->ZAT14                                                    --------->ANAC46                   <------MYB83                                                  --------->ZAT6                       <------MYB46(1)                                               <-----------GT1                     <-----------RAV1(1)                                            <--------HAHB4                        <---------YAB1                       <---------ARR11(3)   <---------ICU4                     <---------YAB1              --------->DAG2                --------->ATHB51                   <---------MYB52(1)             <---------ZAT14               <---------YAB1  ----------->HVH21  --------->TOE2(3) ->HVH21     ---------->DOF2               --------->ICU4--------->ANAC46 --------->YAB1     <-------   agttctcatcttaagtaaagtgctagagcttctctgaatcggagcattattaccactacacttgacaacttctccatcatcgttattgttggtattactg  29576600                                                         --------->LBD16                                               --------->GLK1(2)                        --------->ANAC55(2)    <---------ARR14(2)                        <---------ANAC55(2)   <---------ARR14(2)                    <-----------HVH21        <---------HSFB2a(1)                 ------->PIF5                --------->HSFC1(2)                 <-------PIF5                <----------TaMYB80                                     <                --------->O2            <---------LBD16<---------LBD16                           <---                <---------O2 <---------ANAC46--------->HSFB2a(1)                           --------->TOE2(2)               <---------LBD16 --------->HSFB2a(2)    --------->MYB52(1)                   --------->TOE2(3) --At5g28300  <---------ALFIN1 <---------HSFB2a(2)  <---------ARR14(2)                     <---------MYB59   cgactgtctcgtcttcccacggggtcacgttttgtagaaactctcggagattccgataccggagttaaacctctagattgaagctcgtccatacctaagt  29576700                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                              ------>NtERF2                                                                             ----------->HVH21                                                                            ------>NtERF2                                                                        --------->ANAC46                                                                    <------ZmHOX2a(2)                                                                    <---------HSFB2a(1)                                                                   --------->ARR14(3)                                                                   <---------ARR11(3)                             <---------------AGL15                 <-----------ARR10                             --------------->AGL15                 --------->ARR11(3)                            <-----------------AGL2        <---------ANAC58  <------NtERF2                        <---------ANAC58                  <---------ANAC46  --------->LBD16                        <---------ANAC58                 <-------TEIL------>ZmHOX2a(2)                       --------->HSFC1(2)             <---------At4g35610  --------->ANAC46                       <---------HSFC1(2)             --------->ZAT2<---------GLK1(1)                       <---------ZAT2                 --------->At4g35610  --------->DEAR3(1)   >>>>>>>>>RAP2.2     --------->ZAT2               --------->YAB1 <---------ARR14(3) <---------ARR11(1)    <---------HSFB2a(1)         <---------ATHB12--------->ARR14(2) <---------ARR11(3)    --------->HSFB2a(1)        ------>MYB46(1)  <---------ARR14(2) --------->ARR14(2) <---------MYB52(1)           --------->WOX13(1)--------->GLK1(2) <-----------ARR10 --------->LBD16         <---------MYB52(2)     <------ZmHOX2a(1) ---------CCA1(2)<---------LBD16         --------->GLK1(2)<---------ANAC58<---------LBD16           < ----TEIL  <-----------ARR10<-----------------AGL3------>MYB83   ----------->ARR10                  =   ccatatctaaacaaatctcaccggaagcttgctgtttatggagaaactgaccaatcagcttcgtgggaggatcttcgccgcgacgaaactcaaaaccctc  29576800                             <---------ARR11(3)                             --------->GLK1(2)                             <---------ARR14(2)                             --------->ARR14(2)                             <---------AGP1                             <---------ARR11(1)                             <-----------ARR10                             --------->ARR11(3)                            <---------CCA1(2)                            <------NtERF2                          <---------ANAC46                          <---------DEAR3(1)                         <------NtERF2                         <---------At4g35610                         --------->ATERF1(1)                         <---------LBD16                        <---------RAP2.3(1)                        <---------ATERF1(1)                        <---------RAP2.6(1)                        <---------ORA47(2)                        <---------RRTF1(1)                        ------>NtERF2                        <---------ERF1                       <---------RAP2.3(3)                       <---------RAP2.6(2)                       <---------RRTF1(2)                       --------->ATERF1(2)              <---------ICU4                       <---------ANAC46            ----------->RAV1(1)                       <---------DREB2C(2)       --------->LBD16                       <---------RAP2.3(2)       ------>NtERF2                       <---------ANAC58          --------->At4g35610                       <---------RRTF1(3)        <---------At4g35610                       <---------DEAR3(1)       --------->RRTF1(2)                       <---------ANAC58         ----------->RAV1(1)                      <------NtERF2             --------->DEAR3(1)                      --------->ATERF1(1)    ------->GAMYB                      <---------ABI4(1)      --------->DEAR3(1)                    --------->ALFIN1         --------->ANAC46                  <---------O2  --------->WOX13(1)<------NtERF2                  --------->TGA1a           --------->MYB46(3)                  <---------TGA1a           --------->DEAR3(2)                  <---------ANAC46          <---------MYB55(2)                  --------->O2<------ZmHOX2a(2)--------->RRTF1(1)                  ==================================MYC_MYB                  ===================================MYC_MYB                        <-----------HVH21                <-----------HVH21  --------->YAB1<------NtERF2               --------->TOE1(3)            <---------ALFIN1<---------ARR14(1) --------->RAP2.3(1)           --------->TOE2(3)    <-----------RAV1(1)<---------ATERF1(2) -------->P  --------->ICU4 <---------TOE1(3) ----------DOF2--------->ANAC46------>ZmHOX2a(2)--------->RAP2.3(2)   <---------TOE2(3) ===========================bZIP_DOF      --------->MYB52(1)   <----------DOF2  --------->REM1(1)   atctttttgttgctcccccgtcgtggcggcggatctatcagaatcaaccgccgcagcattatgacctttgttgaggttaccttcaccatcagtccaaaaa  29576900                  <---------ARR11(3)                  <-----------ARR10                  <---------ARR14(2)                  --------->ARR11(3)                  --------->ARR14(2)         <---------CCA1(2)       <---------ANAC58       <---------ANAC58   <---------ANAC58   <---------ANAC58                                                --------->DEAR3(1)  --------->HSFC1(2)                                             <---------At5g28300               --  <---------HSFC1(2)                     <---------ATERF1(1)<---------MYB52(1)                     <-  <---------At4g35610      --------->ZAT14     --------------------->WRI1                        <---  --------->At4g35610     ------>ZmHOX2a(1) >>>>>>>>>>>>>>>>>LFY<-----------GT1                  <---  --------->ZAT2 <---------CCA1(2)      --------->ARR14(2)<---------ANAC58                      -----  --------->HSFB2a(1)<----------DOF2  --------->LBD16     <---------ANAC58                    <------ <---------TOE1(2)<---------ARR11(1)<---------LBD16    <-----------GT1        <---------TOE2(3)<-----   tcgtagcttccgtctctccatatctttcctacagtctctccggagactccattgttgtttccgttttcaccgtcgattttgacgataacttctcgccggt  29577000                                                             --------->ATHB12                                                            <---------ATHB12                                                           ------>MYB46(1)                                                           ------>MYB83                                                          --------->MYB52(1)                                                         --------->AtMYB61                                                      --------->ANAC58          ------->GAMYB                               --------->ANAC58         --------->MYB46(3)                           --------->ANAC46        --------->At4g35610                        <---------REM1(2)       --------->MYB52(1)                          --------->SPL7  --------->LBD16                                <---------ZAT18 --------->RAP2.6(2)                             <---------SPL7 --------->RAP2.3(2)                             --------->ZAT18 ------->At4g35610                              <---------ANAC58                                  --- --------At4g35610                              <---------ANAC46                               <----- ------WRKY12                                   <---------ANAC58                   ---------->DOF2<-- ------WRKY38(1)                               --------------->AtSPL3      ----------->GT1    <------ ---->WRKY18(1)                    --------->GLK1(1)<---------ALFIN1       --------->ANAC58  -------- ---DEAR3(2)                 --------->TOE1(2) --------------->AtSPL8      --------->ANAC58<---------ARR11(3) ------HVH21           ------------>CBF        <---------------AtSPL8    ---------->DOF2   --------->ARR11(3)   cagccgcatcaacggccattactcaaacaatccagcgaaatctaggtttagcgtacacaccaacgattagagaaggaaagcaaaaaaaagaaagatttaa  29577100                                                                                                    <                                                                                                  <--   <----------DOF2                                                                         <---------ANAC55(2)   <---------DAG2                                                                          --------->ANAC58 --------------->AGL15                                                                     ---------- ------>YAB1                                                                               --------->ANAC55(2) ------GT1                         --------->ARR14(2)                                      --------->ANAC58 ---------GT1       --------->ANAC58                    <---------At4g35610              <--------P-- ---AHL20(2)        --------->ANAC58     <----------DOF2--------->ZAT2         ---------->DOF2  ----- ->AHL20(2)       ---------->DOF2  <---------ARR14(2)   <---------ZAT2<----------DOF2  ----------->GT1   tcacacttttgggtaactgtgaaagcaagaagaagagaaaacgcttttatttgatcagagctggtgatgactctttgtgagaaaagagagggtaagtaat  29577200                                                                                                  ---                                                                                                 <---                                                                                                -----                    <---------TOE2(3)                                                           <----                   ---------->DOF2                                                              -----      --------->AHL20(2)         --------->REM1(2)                                              <----     --------->AHL20(2)       <---------ANAC46                                                  <----     <---------AHL20(2)       <---------ANAC58     --------->ANAC46                             -----     <---------AHL20(1)       <---------ANAC58     <---------ALFIN1                             -----     --------->AHL20(1)     <---------ANAC46     --------->AtMYB61                  --------->ANAC46 ------ZmHOX2a(1) <---------AHL20(2)           -------->P              <----------DOF2         ------ -------TOE2(3)   --------->AHL20(2)  ------------>CBF           <---------ICU4     --------->ANAC58 ->GT1<---------AHL20(2) ----------->HVH21<---------ATHB12 --------->REM1(1)        --------->ANAC58- --------->GT1--------------->AGL15 --------->ANAC58   --------->At4g35610    >>>>>>>>>CBP60g  <----- ---->ICU4    <---------------AGL15 --------->ANAC58   <---------At4g35610    >>>>>>>>>SARD1  -------   aaggaaataaaattatctaattaaagtatgacgcgtgtaagccaatcgctaccacacagctacaacatcatcactttgaaatttggacgacacacagaga  29577300 --->ZmHOX2a(2) ---ZmHOX2a(2) ---->ARR14(2) -----ARR14(2)                           <-----------GT1 ---->AGP1                             <---------AHL20(2) -----ARR11(3)                       <---------YAB1 -----GLK1(2)                       <---------AHL20(2) ---->ARR14(3)                      <---------AHL20(1) ---->ARR11(3)                    <---------YAB1            ---------->DOF2 --->GLK1(1)                   <---------YAB1      ------>MYB46(1) --------->HSFC1(1)      --------->ANAC46 ----->ZmHOX2a(1)              <---------AHL20(2)  ------>MYB83    <---------HSFB2a(2)    <---------LBD16 ----GLK1(1)                  <---------AHL20(1) <---------MYB59   <---------HSFC1(1)     <---------At5g28300 ---->ARR10                 <---------YAB1       <---------MYB46(2)--------->HSFB2a(2)   --------->MYB52(1)   tcctcttctccctctctctctctgtgtcttaatattattattttttcaataccaaactttggcaaagttcgagaagaagatgggaacttactcacggcga  29577400                                                                                 --------->ANAC55(2)                                                                       --------->GLK1(1)                                                                       <---------GLK1(1)             <---------YAB1                                           --------->ARR11(3)          <---------YAB1                                             <------ZmHOX2a(1)              -    <---------TOE2(3)                                              <---------TOE2(3)                -    --------->MYB59 --------->TOE2(3)                          <----------DOF2 <-----------GT1      -    <---------TOE1(3)                            <---------ANAC46  <---------TOE1(3)    <---------YAB1   accatttaggtttttattatttcgtcaaactttggcaaactaatatttgtttagtatacattttgttttaaggatatcgttttacatattttgtttgatt  29577500  Previous    Next  AGI:  At1g78610.1    Description:  mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein. Identical to Uncharacterized mscS family protein At1g78610 [Arabidopsis Thaliana] (GB:Q9SYM1); similar to mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G17000.1); similar to mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G53470.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14810.1); similar to hypothetical protein OsI_008239 [Oryza sativa (indica cultivar-group)] Range:  from: 29573923    to: 29577019    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.