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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ZAT14
--------->
AtMYB61
<-----------
GT1
----------->
RAV1(1)
--------->
YAB1
<---------
ALFIN1
--------->
YAB1
-------->
P
<---------
YAB1
------>
MYB46(1)
<------
ZmHOX2a(2)
------>
MYB83
--------->
ARR11(3)
----
<---------
MYB55(2)
<---------
ARR14(2)
<----
<---------
MYB111(2)
--------->
YAB1
<---------
AHL20(2)
-----
<---------
MYB111(1)
<------
ZmHOX2a(2)
--------->
AHL20(2)
------
<---------
MYB59
--------->
ARR11(3)
--------->
YAB1
<-----
<---------
MYB46(2)
<---------
ARR11(3)
--------->
LBD16
<-----
--------->
MYB46(3)
========================
HOX2a_HOX2a
------
<-----------
GT1
--------->
TOE2(3)
<------
ZmHOX2a(1)
------>
ZmHOX2a(2)
<-----
-->
ANAC58
<---------
ZAT14
=======================
HOX2a_HOX2a
------
-->
ANAC58
--------->
ANAC46
---------->
DOF2
<---------
ARR11(3)
--------
>
DOF2
--------->
MYB55(1)
----------->
GT1
----------->
GT1
--------->
ARR14(2)
<---------
ZAT6
<
aattctacctaccacactaaactgaaatgttaaatcagacgagtaagtataaaaggatcataaaccctagatcccgattataataacagtgtaaacagat
28731500
--------->
ANAC58
--------->
ANAC58
----------->
TGA1
----------->
HVH21
<---------
ANAC46
--------->
O2
<---------
O2
<---------
ANAC58
<---------
bZIP60(2)
--------->
bZIP60(2)
----------->
GT1
<---------
ANAC58
--------->
ANAC58
--------->
TGA1a
--------->
ANAC58
--------->
ANAC55(2)
------->
TEIL
<---------
ANAC55(2)
--------->
MYB52(1)
--------->
bZIP60(1)
-->
ZmHOX2a(2)
<---------
TGA1a
--
ZmHOX2a(2)
<---------
bZIP60(1)
---->
CCA1(2)
======================
--->
AGP1
--------->
YAB1
----------->
HVH21
----
ARR11(3)
<<<<<<<<<
ARR2
<---------
HSFB2a(2)
----
AGP1
<---------
ATHB12
--------->
ANAC46
--->
ARR11(3)
--------->
WOX13(1)
--------->
ARR14(2)
----
ARR14(2)
------>
ZmHOX2a(1)
--------->
ZAT2
--------->
AHL20(1)
--->
ARR14(2)
--------->
ARR14(2)
--------->
At4g35610
<---------
ARR14(2)
-
--->
ARR10
<---------
ARR14(2)
<-----------
GT1
<---------
AHL20(1)
-
---------
AtLEC2
<---------
ARR11(3)
--------->
AHL20(2)
<---------
ARR11(3)
-
ctgcatgaacggaaacaacattgcaagttcctcgagtagacaatcaaaataaacagctcgaagggattcaaaatattcgcgacgtgacgaaattgtgaga
28731600
<-----
-------
-------
--------
--------
--------
<------
ZmHOX2a(1)
<---------
TOE2(3)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
=============
HOX2a_HOX2a
--------->
CCA1(2)
--------->
CCA1(2)
--------->
ATHB12
--------->
AGP1
--------->
At4g35610
--------->
CCA1(2)
>>>>>>>>>
GATA-3
--------->
At4g35610
--------->
ARR11(3)
--------->
ARR11(3)
<---------
At4g35610
--------->
AGP1
<---------
ARR11(3)
----------->
RAV1(1)
<---------
ARR11(3)
>>>>>>>>>
GATA-4
---------->
DOF2
--------->
GLK1(1)
>>>>>>>>>
GATA-2
==============
bZIP_DOF
--------->
YAB1
<------
ZmHOX2a(2)
<---------
ZAT14
>>>>>>>>>
GATA-1
-------->
ANAC58
<---------
ATHB12
<---------
ATHB12
--------->
ANAC58
<-------
-------->
ANAC58
--------->
WOX13(1)
<<<<<<<<<<<<<<<<<
LFY
--------->
ANAC58
----------
-------->
ANAC46
<---------
YAB1
<---------
GLK1(1)
--------->
ZAT14
--------->
GLK1(1)
<-
aaacgaaacagcagaagagatgatatcaatgaaaaacatagagatccaaacattggagacagtgaacgagagaaggaagcaagagatctaaggaagatac
28731700
<---------
SPL7
<------
MYB46(1)
<---------------
AGL15
<------
MYB83
--------------->
AGL15
<---------------
AtSPL8
--
TEIL
--------->
ALFIN1
-
-->
ARR14(1)
--------->
At4g35610
<
-->
CCA1(2)
<---------
ZAT2
------>
ZmHOX2a(2)
<
->
ARR11(1)
<------
ZmHOX2a(1)
=======================
HOX2a_HOX2a
->
ARR14(2)
<----------
ARF1
<-----------
RAV1(2)
<---------
MYB46(3)
-----
->
TOE1(2)
<---------
LBD16
<---------
At4g35610
<------
ZmHOX2a(2)
<------
ZmHOX2a(1)
-
--
ARR14(2)
----------->
RAV1(2)
---------->
CDC5
========================
HOX2a_HOX2a
->
ARR10
---------->
DOF2
------->
TEIL
==============================
HOX2a_HOX2a
<------
--------
KAN4(2)
<------
ZmHOX2a(1)
=============================
HOX2a_HOX2a
<---------
ZAT14
gaatatacaaataaaaggaagaaggagaagtac
ctggagacaaggaggaagctcagggtggtactgagatcggagttgttgaagaggagagagttctctg
28731800
<---------
MYB46(3)
<------
MYB83
<------
MYB46(1)
--------->
MYB46(2)
--------->
MYB55(2)
<---------
DEAR3(1)
<---------
GLK1(1)
--------->
MYB111(2)
--------->
GLK1(1)
<---------
MYB46(3)
--------->
LBD16
<---------
AtMYB61
--------->
GLK1(2)
--------->
MYB111(1)
*
TSS
-------->
GLK1(1)
<---------
MYB55(1)
------
---------
ARR14(2)
<--------
P
<-------
TEIL
---------
GLK1(1)
<---------
TOE2(3)
<------
MYB83
<-----------
HVH21
--------->
CCA1(2)
---->
LBD16
<---------
TOE1(3)
<------
MYB46(1)
--------->
ARR14(2)
-------->
ARR14(2)
<---------
DAG2
--------->
MYB59
<---------
ARR14(2)
---
LBD16
<----------
DOF2
<---------
TOE2(3)
----------->
ARR10
gggattccgaaatctgaatccat
gggcgataactttttaggtttttgtgagaaattaggttggtgagagtgtcagagagactcagagaagattcagagaa
28731900
--------->
MYB46(3)
---------->
DOF2
--------->
MYB52(1)
------>
MYB46(1)
------>
MYB83
------->
GAMYB
<---------
LBD16
--------->
AtMYB61
--------->
LBD16
<---------
MYB59
<---------
ANAC46
--------->
MYB46(3)
<---------
AHL20(2)
-------->
P
<-----------
TBP
--------->
WOX13(1)
<-----------
HVH21
<---------
ANAC58
<------
ZmHOX2a(2)
--------->
ANAC58
<---------
ANAC58
--------->
CCA1(2)
<----------
DOF2
<----------
DOF2
--------->
AHL20(2)
<---------
ARR14(2)
<------
MYB46(1)
<-----------
GT1
<-----------
TBP
<---------------------
WRI1
<------
MYB83
---->
DOF2
--------->
ANAC58
<---------
LBD16
--------->
ARR14(2)
--------->
MYB59
<-
agttttttcctttggcccgtcaaaagtatttatatagtatgcgggggacttgggcgatacgatcaaccaaacagccaaaatttggtcttcttcttttttt
28732000
<-------------
<---------
DAG2
<---------------
AGL15
--------------->
AGL15
<-----------------
AGL1
----------------->
AGL1
<-----------------
AG
--------->
HSFB2a(2)
<-----------------
AGL3
<---------
DAG2
<-----------------
AGL2
<----------
DOF2
<-----------
GT1
<-----
--------->
ANAC58
--------->
ARR11(3)
<-----
--------->
ANAC58
<---------
ARR11(3)
-------
--------->
ANAC46
--------->
AHL20(1)
-------
<---------
WRKY38(1)
---------->
DOF2
--------->
AHL20(2)
<--------
<---------
WRKY12
--------->
ANAC46
--------->
AHL20(2)
<---------
DAG2
--------->
ZAT14
<------
ZmHOX2a(2)
<-----------
GT1
<---------
AHL20(2)
<----------
DOF2
-
<---------
ZAT18
<-----------
HVH21
--------->
MYB52(2)
--------->
CCA1(2)
----------------->
AG
---------
DOF2
<---------
HSFB2a(2)
----------->
GT1
<<<<<<<<<<<<<<<<<
LFY
<---------
MYB52(1)
<
tctttcagtccacgctttttctcgatcagcccttgttattctggttatttacgaaaatgccattggatataaatatatacccttacctttttcggtttgg
28732100
<---------
MYB46(3)
<------
MYB46(1)
<------
MYB83
--------->
MYB59
<------
MYB83
<---------
AHL20(2)
--------->
ATHB12
<---------
ANAC58
----
AGL1
<---------
ANAC46
-
MYB83
<--------
P
<---------
ANAC58
-
MYB46(1)
<------
MYB46(1)
--
-->
MYB59
--------->
MYB52(2)
--------->
MYB111(1)
<---
-->
MYB46(2)
--------->
MYB46(2)
----
-
MYB52(1)
------>
MYB46(1)
<---------
MYB46(3)
<-----
-------->
ICU4
------>
MYB83
<---------
AtMYB61
<--------
---------
YAB1
<---------
MYB59
<---------
MYB52(1)
<---------
AHL20(2)
<---
taatgtttggttagtgaccaaattgtctaattcggtttggtgttcatattttatgggttttaaaaggttttagactgcaaatttatcgaactgtatgagt
28732200
<------
MYB46(1)
<------
MYB83
<---------
AtMYB61
<------
MYB46(1)
<---------
MYB52(1)
<------
MYB83
----->
TEIL
<---------
AtMYB61
------
ZAT18
--------->
MYB59
------>
NtERF2
------>
MYB46(1)
----->
ZAT18
<---------
MYB52(1)
----------->
HVH21
<---------
MYB59
----------
AtSPL3
------------>
MYB.PH3(1)
--------->
At4g35610
--------->
AtMYB61
-
YAB1
<---------
YAB1
<---------
AtMYB61
<---------
ALFIN1
------>
MYB83
------
ZAT14
<---------
TOE2(3)
<-------
GAMYB
<---------
At4g35610
<---------
PCF2
-
gtacgtttggttttaagtttagtttataaatgcggttaggttttggtttagtttgagttgacaaattccccacctaagtgcgaccaaactttcaaactaa
28732300
--------->
LBD16
--------->
ANAC58
--------->
ANAC55(2)
<---------
ANAC55(2)
<---------
ANAC46
----------->
HVH21
<------
MYB83
--------->
ANAC55(1)
--------->
CCA1(2)
<------
MYB46(1)
--------->
ANAC58
<---------
YAB1
<------
ZmHOX2a(1)
--------->
ANAC46
--------->
CCA1(2)
---------->
DOF2
<---------
LBD16
--------->
ARR14(2)
--------->
AtMYB61
<---------
ARR14(2)
--------->
ANAC58
--------->
YAB1
--------->
ANAC58
--------->
ARR14(2)
--------->
ANAC58
<---------
YAB1
--------->
ANAC58
----------->
ARR10
---------->
DOF2
<---------
ARR14(2)
----------->
RAV1(1)
--------->
At5g28300
-------->
AHL20(2)
<------
ZmHOX2a(1)
---------->
DOF2
--------->
At4g35610
----------->
GT1
------
gaaaaaataaaagcaaaaaataggatatgatgatatgctaaaagggagagtgaatgagcaccaaaggataggtgaagggtaaatacggaaatagcgagag
28732400
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AGI:
At1g76550.1
Description:
pyrophosphate--fructose-6-phosphate 1-phosphotransferase alpha subunit, putative / pyrophosphate-dependent 6-phosphofructose-1-kinase, putative. similar to pyrophosphate--fructose-6-phosphate 1-phosphotransferase-related / pyrophosphate-dependent 6-phosphofructose-1-kinase-related [Arabidopsis thaliana] (TAIR:AT1G20950.1); similar to Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) (GB:Q41140); similar to pyrophosphate-dependent phosphofructokinase alpha subunit [Citrus sinensis x Poncirus trifoliata] (GB
Range:
from: 28727596
to: 28731900
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.