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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
GLK1(1)
--------->
ARR14(2)
<---------
ARR14(2)
--------->
GLK1(2)
<---------
GLK1(2)
---------->
DOF2
--------->
YAB1
---------->
DOF2
--------->
AHL20(1)
---
<---------
ANAC55(2)
--------->
AHL20(2)
--------->
ANAC55(2)
----------->
GT1
<---------
AHL20(1)
--------->
TOE2(3)
<---------
AHL20(2)
<---------
AHL20(2)
<-------
TEIL
<--
--------->
AHL20(2)
---------->
DOF2
--------->
RVE1(1)
---------->
DOF2
<---
ctttctaaacaaactatttaatatgtaaaaagaaaagaagacacaaagaaacaataaaatatcagaatcccaaaaatccaaagttcatacttaatatatg
28248700
<-------
MYC2
---
------->
MYC2
<---
------->
MYC3
<------
--------->
ICU4
<--------
--------->
YAB1
<---------
GLK1(2)
---------
<---------
ZAT6
<----------
DOF2
---------
------------>
AGL15
<-------
MYC3
<---------
DAG2
<---------
YAB1
-------------
AGL15
----------->
GT1
--------->
ARR11(3)
--------->
ICU4
--------------
AGL2
---------->
DOF2
---------->
DOF2
<---------
ARR11(3)
--------->
YAB1
ctattttgggcaaactagtcataaagagcacgt
ttaaaccaaagaaatataacttacaagaactttttgagagaatttctcaaaatcactagaatgatta
28248800
--------->
ARR14(3)
<---------
AHL20(1)
<---------
ANAC58
--------->
ARR11(3)
--------->
ARR11(3)
<---------
ANAC58
<---------
ARR14(3)
--------->
AHL20(1)
<-----------
GT1
<---------
ARR11(3)
------>
YAB1
----------->
GT1
<---------
TOE1(2)
------
YAB1
<---------
AHL20(2)
<-------
TEIL
<---------
YAB1
---
YAB1
<---------
CCA1(1)
--------->
ARR14(1)
-
ICU4
<---------
RVE1(1)
--------->
ARR11(1)
>
YAB1
--------->
ARR11(3)
--------->
ATHB12
<---------
GLK1(2)
>
ATHB12
<---------
ARR11(3)
---------->
DOF2
----------->
ARR10
--
tcaaaatatatcgagagcatcatatatagatatttagttatataccttgtgtcaaagtcattgatgcttcttgagttagattcgaaggtcttgtaattgg
28248900
------>
ZmHOX2a(1)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ARR14(2)
-----
<---------
GLK1(2)
<---------
<---------
ARR14(2)
<---------
At4g35610
--------->
AGP1
----------->
RAV1(1)
--------->
ANAC58
<---------
ARR11(3)
------>
NtERF2
--------->
ANAC58
--------->
ARR11(3)
<----------
DOF2
--------->
ANAC46
----------->
HVH21
--------->
GLK1(1)
<---------
ANAC46
<---------
ETT(1)
<----------
ID1
<---------
GLK1(1)
<---------
ANAC58
----------->
HVH21
-------->
DOF2
----------->
ARR10
<---------
ANAC58
--------->
SPL7
gcaaagggacacgaccagtctcgatgttgatgagatcctcgacgagaatgtcatagtggcgcttcacttcttctacagttttccctccgacagcttttgc
28249000
---------->
ID1
------>
ZmHOX2a(1)
<---------
ANAC58
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
<---------
HSFB2a(2)
<-------
GAMYB
--------->
ANAC58
<---------
ANAC58
--------->
ANAC58
<---------
MYB46(3)
<---------
At4g35610
--------->
ARR11(3)
------------>
AGL1
--------->
ALFIN1
--------->
At4g35610
<---------
ARR11(3)
-
DOF2
<-----------
HVH21
<---------
ANAC46
--------->
HSFB2a(2)
<-------
TEIL
cacattgtgccatcggtcgggtgtgtccttgtcgtaaactgccaaggccctctcgaacatcttgttttgactaaacgtccatggtgagattgaacttctt
28249100
--------->
AHL20(2)
<---------
MYB52(1)
------>
NtERF2
--------->
ANAC58
<---------
ZAT14
--------->
ANAC58
--------->
ZAT18
---
--------->
bZIP60(1)
--------->
ZAT14
---
--------->
ANAC46
<------------
CBF
<---------
ZAT14
<---------
AHL20(2)
<---------
bZIP60(1)
---------->
DOF2
<---------------
AtSPL8
--------->
AHL20(2)
---------->
ID1
---------->
DOF2
---------->
DOF2
<---------
ZAT6
----------->
TBP
gagtttgacgccat
taatttcttataacttgagatggaaaggaaagagattgaaaagagagagtactgagtgttgaaagttgctctataaaatgaatagc
28249200
------>
ZmHOX2a(1)
--------->
TOE2(3)
<---------
ANAC46
---------->
DOF2
<---------------
AGL15
--------------->
AGL15
--------->
GLK1(2)
------------>
CBF
<-
----------------->
AGL3
--------->
GLK1(1)
<----------
DOF2
--
----------------->
AGL1
<---------
GLK1(1)
<---------
AHL20(2)
----
<------
NtERF2
<------
ZmHOX2a(1)
<---------
GLK1(2)
--------->
AHL20(2)
<-----
------>
ANAC58
----------->
GT1
<---------
TOE1(2)
<---------
AHL20(2)
<--------
------>
ANAC58
<------
ZmHOX2a(1)
------>
ZmHOX2a(1)
--------->
YAB1
<-----------
GT1
aaggcagggttccttataaggaggagaaaaagagagttcctagattctgcaagttggagagttttctattttaatttctttttcaattcactagcttttc
28249300
<---------
AHL20(2)
-------->
HAHB4
<---------
ICU4
--------->
YAB1
<--------
HAHB4
--------->
ATHB51
--------->
ANAC58
<--------
ATHB1
---------
<-----------
GT1
<---------
YAB1
<-----------
GT1
<---------
CCA1(1)
<---------
ATHB51
<---------
RVE1(1)
<---------
AHL20(2)
<---------
RVE1(1)
--------->
AHL20(2)
<---------
CCA1(1)
--------
AHL20(2)
<---------
ARR11(3)
--------->
ICU4
<---------
ARR11(3)
------->
AHL20(2)
--------->
ARR11(3)
<---------
ZAT18
--------->
ARR11(3)
-
----->
TOE2(3)
--------->
AHL20(1)
------->
GAMYB
--------->
YAB1
--------->
AHL20(1)
--
----
YAB1
<---------
AHL20(1)
--------->
MYB46(3)
<---------
YAB1
<---------
AHL20(1)
---
--
DOF2
---------->
DOF2
--------->
ANAC58
--------->
ZAT18
---------->
DOF2
---------
attaattaagttgaaaactaaagatattttactcacgataacagccatattagtggtctataataattaagttgatactaaagatattttactcacgata
28249400
<---------
ICU4
--------->
AHL20(2)
<--------
ATHB1
<---------
AHL20(2)
--------->
ATHB51
<---------
AHL20(2)
<---------
ATHB51
----------->
GT1
--------->
TOE2(3)
--------->
ICU4
<---------
ARR14(2)
--------->
YAB1
----------->
GT1
--------->
ARR11(3)
>
ANAC58
--------->
YAB1
--------->
ARR14(2)
------->
P
--------->
ANAC58
------->
TEIL
----->
GAMYB
--------->
ANAC46
<---------
CCA1(2)
------>
MYB46(3)
--------->
YAB1
--------->
YAB1
<---------
ANAC55(1)
>
ANAC58
---------->
DOF2
--------->
ANAC58
------->
TEIL
<---------
ANAC46
acaaccatattaatggtctacaaaagagtcattcgtaacgccatagtaataatttctgatgtatttttctgaaaattaagtgtatcttgttaaaaactca
28249500
-------->
HAHB4
--------->
ATHB51
--------->
YAB1
<--------
ATHB1
<---------
ICU4
<--------
HAHB4
<---------
YAB1
--------->
ICU4
--------->
YAB1
<---------
ATHB51
<---------
ICU4
--------->
DAG2
<--------
HAHB4
<---------
ANAC55(2)
<-----------
GT1
----------->
GT1
<---------
TOE2(3)
<---------
YAB1
----------->
GT1
--------->
YAB1
<---------
AHL20(2)
--------
----------->
GT1
----------->
GT1
--------->
AHL20(2)
---------
---------->
DOF2
---------->
DOF2
------->
TEIL
<---------------
AtSPL8
--------->
AHL20(2)
catggaaagtgtgataaaacgtaaagtaataattaagaaatgaaccaatttatcattaccagttgatttaagtacaaagtctattcaacttaaaatatcg
28249600
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AGI:
At1g75250.1
Description:
myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT1G19510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47617.1); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778)
Range:
from: 28248734
to: 28249114
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.