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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                        <---------ANAC46
                  <-------TEIL                          <---------ANAC58                         ---
                <---------ARR14(2)                      <---------ANAC58                      <-----
          ------>NtERF2 ------>ZmHOX2a(1)              <-------TEIL                  --------->ARR14(2)
          --------->LBD16                           <---------At4g35610              <---------ARR14(2)
         --------->ANAC58                      <---------DAG2             <------ZmHOX2a(1) <-------
         --------->ANAC58       <----------ID1 <----------DOF2    ---------->DOF2    --------->GLK1(2)
---------YAB1   --------->ARR14(2)          <---------ALFIN1  ---------->DOF2       <---------GLK1(2)
 
ttatgttatgtcccgcccaaattcgtcctacaaaaacaccaaaatcaacacttttagcttcgtgagaaagaaagcgaggaagagagagaatcccttaccg  27967200
                                                                          =================bZIP_DOF
                                                                          --------->TGA1a
                                                                          <---------O2
                                                                          --------->bZIP60(2)
                                                                          --------->O2
                                                                       <---------MYB52(1)
                                                                      <---------RAP2.6(3)
                                                                      <---------At4g35610
                                                             --------->ANAC58
                                                       <-----------HVH21  --------->ANAC46
       --------------------->WRI1                 <---------GLK1(1)   ------>NtERF2
    <-----------HVH21                    --------->ZAT18     --------->ANAC58                      <
------>REM1(2)                           <---------ZAT14    --------->LBD16            <------------
----ANAC46 --------->ARR11(3)            --------->ZAT14   <---------ANAC46     <----------DOF2    <
--At5g28300<---------ARR11(3)        ------->TEIL --------->GLK1(1)  --------->RAP2.6(2) <---------ZAT14
 
tgaagaatgtcatagaccttatcggcgatttcagagaatgtatgtgcagagagaactccgtcgcgcgtaatgccgctacgtcgctttgtgagcgtagaga  27967300
             <------MYB46(1)
            --------->MYB59
       <------ZmHOX2a(2)
      <---------ARR11(3)
      --------->ARR11(3)
  ---------->DOF2
 =============HOX2a_HOX2a    ----------->GT1
 <------ZmHOX2a(1)         --------->ZAT18         <-----------------AG
---------TOE1(3)      ---------->DOF2    <---------GLK1(1)                     <---------ALFIN1
---------WRI1<------MYB83 --------->ALFIN1    ------>ZmHOX2a(1)              <---------ALFIN1   ----
---------TOE2(3)    --------->MYB46(3)   <---------At4g35610                <------NtERF2     ------
 
ttaaggaaagatcagtaggtcgaaccaaagtggagtaactatagagctcctctagcctccttgggcaaactaagatggccccaaactccaaaatcgcgaa  27967400
                        ------>NtERF2
                       --------->RAP2.3(3)
                       --------->DEAR3(1)
                    --------->DEAR3(1)
                    ------->GAMYB                                            --------->ANAC58
                   --------->MYB46(3)                                        --------->ANAC46
                   --------->DEAR3(2)                             <------NtERF2
                   <---------ABI4(2)                             ------>NtERF2
                   --------->ATERF1(1)                           --------->ABI4(1)
                   <------------AtMYB77                         --------->ATERF1(2)
                  <---------ATERF1(1)                           --------->RAP2.6(2)
                 <---------ARR14(2)                             --------->RAP2.3(2)
                 --------->ARR14(2)                             <---------ATERF1(2)
               <---------DEAR3(2)                               --------->RAP2.3(3)
              --------->ETT(1)                                  --------->DEAR3(1)
           <------MYB46(1)                                     --------->RAP2.3(1)
           <------MYB83--------->RAP2.3(2)                     --------->ATERF1(1)
      --------->ATHB12--------->DEAR4(2)                       --------->ERF1--------->ANAC58
   <-----------------AGL1                --------->ANAC58      --------->ORA47(2)
   ----------->RAV1(2)--------->RAP2.3(1)--------->ANAC58      --------->DEAR4(2)          ---------
----->DAG2--------->MYB59                --------->ANAC46     <---------ATERF1(1)         --------->DAG2
---->DOF2 <---------AtMYB61       ----------->GT1            --------->DEAR3(1)          ---------->DOF2
 
aggctcccctgatttggtcggaaccgccgtctcaaggtcgaaaaacgctatctcgcttctctcatcgccgcccagactcgaagccattgttgaaaagtga  27967500
                                                                ------>ZmHOX2a(1)
                                                            ------->PIF5
                                                            <-------PIF5
                                                           ==================bZIP_DOF
                                                           --------->O2
                                                           --------->TGA1a
                                                           <---------TGA1a
                                                           --------->ANAC58
                                                           ==================bZIP_DOF
                                                           --------->bZIP60(2)
                                                           <---------O2
                                                          ------>NtERF2
                                                         <---------ALFIN1
                                                        <------NtERF2           <---------ARR11(3)
                                                       ------>NtERF2            --------->GLK1(2)
                                                       <-----------HVH21 --------->LBD16
                                                      --------->ANAC46   ----------->GT1
                                                      --------->ANAC58  <---------ANAC55(2)      <--
                                                      --------->ANAC58  --------->ANAC46         ---
                                                    --------->ANAC58    --------->ANAC55(2)      ---
                                   ==================================bZIP_DOF   --------->ARR11(3)
                             <------MYB83 <---------KAN4(2)--------->ANAC58    --------->RVE1(1) ---
                             <------MYB46(1)        --------->ANAC58   <---------LBD16           ---
                 --------->GLK1(2) ---------->DOF2  --------->ANAC46  <-----------GT1            ---
       *TSS  <------ZmHOX2a(1)  <-----------TBP <-----------HVH21 --------------->AGL15        -----
-->GT1---------->DOF2      --------->ALFIN1   --------->At4g35610 <----------DOF2       <----------DOF2
 
aaactgatagaaagaaggagaagctaataggtgggttttaaagcgaatgagcttcacgcgccacgtcctctttttacggaaaaaatctaaactttgagag  27967600
                         <-----------TGA1
                         <-----------HVH21
                        <---------ANAC58
-------ANAC55(2)        <---------ANAC46                                                ------>MYB46(1)
------>ANAC58           <---------ANAC58                                                ------>MYB83
------>ANAC46       <---------ANAC58                                                  --------->AtMYB61
------>ANAC58----------->GT1 <---------At4g35610                                     --------->ANAC46
------>ANAC55(1)    <---------ANAC58                                                 --------->ANAC58
------>ANAC55(2)  --------->ARR11(3)                                                 --------->ANAC58
---->CCA1(2)<---------TOE2(3)--------->At4g35610                  <----------DOF2  --------->ANAC46
 
acgcaactgtagaatgaggtttatcttgcgtcatctgcattcacttggagtgatcaacaaatttgattcctttcttctacattttcacaccaaatcgctt  27967700
                                                                 <---------ALFIN1
                                      --------->MYB46(3)         --------->DEAR3(1)
                     --------->ARR14(2)                        ------>NtERF2
                     <---------ARR14(2)                        --------->LBD16
                     <---------ARR11(3)                       <---------ETT(1)
                     --------->ARR11(3)     ---------->DOF2   --------->HSFB2a(2)
                     --------->ARR14(3)    --------->YAB1     --------->ANAC46
                     <---------AHL20(1)   <---------ATHB12    <---------ATERF1(2)
               --------->ANAC58 <---------LBD16               <---------HSFB2a(2)
               --------->ANAC58 --------->LBD16    <----------DOF2
          <----------DOF2   <---------ARR14(2)  --------->ARR11(3) <------NtERF2
       <---------ALFIN1     --------->ARR14(2)  <---------ARR11(3)------>NtERF2               ------
     ------->GAMYB   <---------ARR14(3)  ------>MYB46(1)     <---------LBD16          <---------TOE1(2)
    --------->MYB46(3)      ------->TEIL ------>MYB83     <---------GLK1(1)          ------>ZmHOX2a(1)
  <-----------GT1    --------->AHL20(1) --------->WOX13(1)--------->GLK1(1)   ---------->DOF2 ------
 
aaatctaaccacactttgaagcaatatcttgaatctggggaaccaatcaaagctcttttagatttccggcaccgattcagacaaagtcctagttttgttg  27967800
                                                                        --------->ANAC58
                                           <---------HSFB2a(1)          --------->ANAC46
                                           --------->HSFB2a(1)        <---------ALFIN1
                                           --------->HSFC1(2)       --------->CCA1(2)
                                  --------->ZAT2                    <------ZmHOX2a(2)
                                  --------->At4g35610              --------->ARR14(2)
                                  <---------At4g35610              <-----------ARR10
                                  <---------ZAT2                   --------->AGP1
                               <---------MYB52(1)                  <---------ARR14(2)
                              <-----------TGA1                     <---------ARR11(3)
                              <-----------HVH21                    --------->ARR11(3)
                       <---------TOE2(3)   <---------HSFC1(2)<---------ETT(2)
        <---------MYB52(1)   <---------ANAC46       --------->ANAC55(2) --------->ANAC58
   <-----------GT1    ---------->DOF2   ---------->DOF2      --------->ETT(2)
--->ETT(2)   <---------ANAC58<---------ANAC58    ==========================HOX2a_HOX2a
----->HVH21  <---------ANAC58<---------ANAC58    ------>ZmHOX2a(1)--------->At4g35610
 
acagtttttctgttttgtttgccattaaagtttcgtcagctcagaaagcttcctcacttgatggtagacagatccacgctcttgtaagaaaactaggttt  27967900
                                               <---------DEAR3(1)
                                               <---------MYB46(3)
                                              --------->ALFIN1
                                             --------->LBD16                    --------->ANAC58
                                             <---------LBD16      --------->ANAC46     ----------->RAV1(2)
    <---------MYB52(1)              <-----------GT1  <---------bZIP60(1)        --------->ANAC46
   <-------GAMYB    <---------ARR11(3)      <---------ANAC58      --------->ANAC58   --------->ANAC58
   <---------RAP2.6(3) <----------DOF2      <---------ANAC46      --------->ANAC58   --------->ANAC58
  ----------->GT1   --------->ARR11(3)      <---------ANAC58     ------->TEIL   --------->ANAC58
 
caatgccgttattcaaattcaaacatctttagtgggattctactcttccgtgggtgatgtcgattatgcacgccaagtgttcgacgaaacgcctgagaaa  27968000
                      --------->ATHB12
                     <---------YAB1
                     --------->ICU4                                                             <---
            --------->ETT(2)                                                                   -----
            --------->ZAT18       --------->ZAT6                                               <----
         <---------ANAC46    --------->ZAT2 --------->YAB1           ----------->GT1       ---------
       <---------ANAC58      <---------At4g35610                   <---------At4g35610<---------At4g35610
       <---------ANAC58      --------->At4g35610<---------GLK1(1)  --------->At4g35610--------->At4g35610
 
cagaacattgtcttgtggacagcgatgatttcagcttacactgagaatgagaactctgtggaagctattgagctgtttaaacgaatggaagcggaaaaga  27968100
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AGI:  At1g74390.1   
Description:  exonuclease family protein. similar to exonuclease family protein [Arabidopsis thaliana] (TAIR:AT5G07710.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66660.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Exonuclease; (InterPro:IPR006055); contains InterPro domain Exonuclease, RNase T and DNA polymerase III (InterPro:IPR013520)
Range:  from: 27965198    to: 27967508    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At1g74400.1   
Description:  pentatricopeptide (PPR) repeat-containing protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G21065.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64521.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885)
Range:  from: 27967614    to: 27969002    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.