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Chromosome 1
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Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ZAT18
<---------
ANAC58
<---------
ANAC58
<---------
ZAT2
<---------
STY1(2)
<<<<<<<<<
ARR2
--------->
ANAC58
<<<<<<<<<
ARR1
--------->
ANAC58
<<<<<<<<<
ARR1
--
<---------
REM1(1)
--------->
ANAC46
<<<<<<<<<
ARR2
--
<---------
GLK1(2)
--------->
ANAC58
--------->
GLK1(1)
--------->
STY1(2)
----->
TEIL
<---------
TOE2(3)
--------->
ANAC58
<---------
GLK1(1)
------>
ZmHOX2a(1)
<-
-
DDF1
--------->
TOE2(3)
------->
GAMYB
--------->
ZAT6
<---------
ALFIN1
<-
->
HVH21
<---------
ANAC46
--------->
ARR14(2)
------>
ZmHOX2a(1)
--------->
ANAC46
--------->
ZAT18
gtaccagattgtaacgttgatgtagatgtcttcgtaaccccaagtaagccactcctaataacactggaaatctatgccacaatcctagcttgtccactaa
27710800
<---------
AHL20(2)
--------->
AHL20(2)
<---------
YAB1
--------->
GLK1(2)
<------
ZmHOX2a(2)
--------->
AHL20(2)
------->
ZAT14
<---------
AHL20(2)
--------->
YAB1
--------->
CCA1(2)
------->
ZAT18
<---------
AHL20(1)
--------->
YAB1
<---------
YAB1
--------
ZAT18
<---------
AHL20(2)
--------->
AHL20(2)
---------->
DOF2
<---------
AHL20(2)
--------
ZAT14
--------->
AHL20(2)
<-----------
GT1
--------->
YAB1
--------->
YAB1
---
gtgcacaat
ctgtatatataattttttttaaacgatcaaattaacaaaataataagaaaaattataaaagcgatatgataacttattttcttaagagaag
27710900
<---------
AHL20(2)
<---------
AHL20(1)
------->
TEIL
<---------
ARR14(2)
<------
ZmHOX2a(2)
------->
TEIL
---------
------->
DOF2
<---------
CCA1(2)
<---------
GLK1(1)
---------->
DOF2
<---------
AHL20(2)
-
aaaagcatatatagttcatatatttagagagatagagagatcagagatgtatttatgttcttgttaaagagagagatgtatttac
atagaacaaaaaagc
27711000
<------
ZmHOX2a(1)
<---------
TOE2(3)
<---------
At4g35610
<---------
ZAT2
--------->
At4g35610
--------->
ZAT2
------->
TEIL
->
DOF2
--------->
ARR11(3)
<---------
REM1(1)
--------->
GLK1(1)
----
--------->
DOF2
--------->
ICU4
<------
ZmHOX2a(1)
<---------
AHL20(2)
atcaaagtaagacatcttggaaacaacatgatgaagctgaggatgaagaaaccatgaagaggatggagagaaacccat
tttttgccttgatttttttttg
27711100
<---------
MYB46(3)
<---------
AHL20(2)
<---------
YAB1
----
--------->
AHL20(2)
--------->
ICU4
<---
<---------
DAG2
--------->
YAB1
--------->
YAB1
--------->
ANAC46
<---
<---------
CCA1(2)
<------
ZmHOX2a(2)
<----------
DOF2
--------->
ANAC58
*
TSS
<-----
------>
ID1
<----------
DOF2
<----------
DOF2
--------->
ANAC58
<-----------
GT1
-------
tctccctatctatcttctttggatcatgtgtttgctttattctttaaatgatagtcacacaattgtaatggttgt
attcacacgattactctcatgtatt
27711200
<---------
WRKY12
<---------
WRKY45
--------->
ANAC58
<---------
WRKY38(1)
--------->
ANAC46
<---------
AHL20(2)
<---------
ALFIN1
<---------
AHL20(2)
<--
----->
AHL20(2)
--------->
AHL20(2)
<---
------
AHL20(2)
--------->
AHL20(1)
----
--------
TBP
------->
TEIL
--------->
AHL20(2)
<---
------
TBP
--------->
ANAC58
------->
TEIL
<---------
AHL20(1)
----
>
TEIL
<---------
ALFIN1
--------->
AHL20(2)
----------->
GT1
<---------
AHL20(2)
----------->
GT1
tatatagacccacacgcatactcacatttacatatgtatgtatgtcaagttaatcttgaatatgtcattttattaaataagtcaacgagtaaattctaaa
27711300
<---------
ICU4
--------->
AHL20(2)
--------->
ATHB51
--------->
GLK1(1)
<---------
AHL20(2)
<---------
GLK1(1)
--------->
ICU4
<---------
ARR11(3)
--------->
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(1)
--------->
ARR11(3)
<---------
AHL20(1)
<------
NtERF2
--------->
ARR11(3)
-------
ICU4
<---------
ATHB12
<---------
ARR11(3)
------
ATHB51
--------->
ICU4
--------->
AHL20(2)
----->
AHL20(2)
<---------
ICU4
<---------
AHL20(2)
------
AHL20(2)
<---------
WOX13(1)
------>
ZmHOX2a(1)
--------->
AHL20(2)
----->
ICU4
--------->
MYB52(1)
<---------
ALFIN1
----------->
GT1
<---------
TOE2(3)
taattaattatttagccatcggattgactattcgtttcatcgtcgtgagcatcacttcctaatgactaggtggcaaaatatatttcactaagatttcttc
27711400
<-
<---------------
AGL15
--------------->
AGL15
-----------------
<---------
ICU4
-----------------
----------->
GT1
<----------------
---------->
DOF2
<---------
AHL20(2)
<---------
AHL20(2)
<-----
----------->
GT1
<---------
AHL20(2)
--------->
AHL20(2)
<-----
<---------
AHL20(2)
--------->
ARR14(2)
--------->
AHL20(2)
--------->
WOX13(1)
---------
--------->
AHL20(2)
<---------
ARR14(2)
<---------
ARR14(2)
--------->
YAB1
<-----------
GT1
--
--------->
AHL20(2)
<------
ZmHOX2a(1)
--------->
ARR14(2)
--------->
ARR11(3)
=================
agattaaattcaacattttagggaggatttgtataaaaagagaatagtatctgcaaataaatagtaaaatcatggtcaattaattcactatatatggata
27711500
--------------------->
WRI1
<---------
ICU4
<---------
ANAC58
--------->
AHL20(1)
<---------
ANAC58
<---------
AHL20(2)
<-----------
GT1
--------->
AHL20(2)
--------
AHL20(2)
--------------->
AGL15
>
AGL3
<---------------
AGL15
>
AGL2
<---------
ICU4
--------->
YAB1
-
AGL3
--------->
ATHB51
--------->
AHL20(2)
--------->
At5g28300
----
CCA1(1)
<---------
CCA1(2)
<----------
DOF2
<---------
YAB1
----------->
GT1
----
RVE1(1)
<---------
DAG2
<--------
HAHB4
--------->
AHL20(2)
<-----------
GT1
<
-->
GT1
------->
TEIL
--------->
ATHB12
----------->
GT1
--------->
AHL20(2)
-
------->
AHL20(2)
-------->
P
--------->
ICU4
---------->
DOF2
--------->
MYB52(1)
<-
==============================================================
MADS_MADS
<---------
ATHB51
<-------
tttatttccttgttttgatcaacctttcttatcttgcattattagattactttgtaaagaaaataatattgactaacaaattattcacactgtaatttat
27711600
----------->
HVH21
<---------
ICU4
<---------
AHL20(2)
-------->
ATHB1
<---------
WOX13(1)
--------->
ATHB12
------->
TEIL
<---------
YAB1
>>>>>>>>>
GATA-1
---------
ZAT14
>>>>>>>>>
GATA-2
<---------
AHL20(2)
--------->
ALFIN1
-------->
ZAT14
>>>>>>>>>
GATA-4
<---------
YAB1
<---------
ANAC58
--------
ZAT6
>>>>>>>>>
GATA-3
<---------
AHL20(2)
<---------
ANAC58
--
AHL20(2)
<-----------
RAV1(2)
--------->
YAB1
<---------
ANAC46
agtgtagaatcattgacaggtggattgatgcatttattcatagtatttttattatctaaaaatcccaattggcctggtggattactatctactctagtat
27711700
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AGI:
At1g73680.1
Description:
pathogen-responsive alpha-dioxygenase, putative. similar to ALPHA-DOX1 (ALPHA-DIOXYGENASE 1) [Arabidopsis thaliana] (TAIR:AT3G01420.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74266.1); similar to TPA: TPA_exp: alpha-dioxygenase 3 [Lycopersicon esculentum] (GB:DAA01542.1); similar to alpha-dioxygenase 2 [Solanum lycopersicum] (GB:CAH64542.1); contains InterPro domain Haem peroxidase, animal; (InterPro:IPR002007); contains InterPro domain Haem peroxidase; (InterPro:IPR010255)
Range:
from: 27707605
to: 27711175
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.