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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                            <---------MYB111(1)
                                                            <---------MYB111(2)
                                                           ------>MYB83
                                                     ----------->HVH21
                                                   <---------O2
                                                   --------->ANAC55(2)
                                                   <---------ANAC58
                                                   <---------ANAC58
                                                   <---------TGA1a
                      <---------ZAT14              --------->TGA1a
               <---------AHL20(2)                  <---------ANAC55(2)
   ------>ZmHOX2a(1)  --------->ZAT14              --------->O2
------AHL20(2) --------->AHL20(1)                 <---------TOE2(3)                            <----
----->AHL20(2) --------->AHL20(2)        ====================bZIP_DOF                         <-----
---->YAB1     --------->AHL20(2)         <----------DOF2   ------>MYB46(1)              <---------AHL20(2)
>TEIL   ----------->GT1          ---------->ID1  --------->MYB52(1)                     --------->AHL20(2)
 
ttaatcctcatgggaaaaaaaattgtacagtagtttgttcttctctttatactaacgtgaccaactacttcttggtttaaaacaaacatgtttaaattat  27070200
 <-----------GT1                                                      --------->YAB1
--------->AHL20(2)   ----------->GT1                                  --------->ATHB51
-----YAB1            --------->YAB1                                  <---------ATHB12           <---
------GT1   <---------YAB1  ----------->GT1                       ------------>ATHB5       ---------
 
caatttactaaaactatgattctatagtaacatgtgaaatgagaaacatttcaatgtcaaaagtctggtccaattatcgaactacataaaaacattgtaa  27070300
                                                                                             <------
                                                                                             -------
                                                                                            <-------
                                                                                            --------
                                                                                            <-------
                                                                                         -----------
                                                                                        --------->LBD16
                                                                                       --------->ANAC46
                                                                                       --------->HSFB2a(2)
                              --------->ETT(2)                                         <---------HSFB2a(2)
                              <---------ETT(2)               --------->ANAC58         <---------LBD16
   --------->AHL20(2)  <---------YAB1                        --------->ANAC58     --------->ARR14(2)
<----------DOF2    ----------->RAV1(1)                       --------->ANAC46  --------->ANAC55(2)
--------GT1       --------->AtMYB61  ---------->DOF2 --------->YAB1           <---------TOE2(3)
-->GT1 <---------AHL20(2)    --------->DDF1        ------->TEIL--------->YAB1 --------->MYB59-------
 
taccttttatatatatgaagaccaccattaatgtcgacagaaaagatagccatgaatcatattcaagcatcaaaactgatttaggtatctccggaatcat  27070400
                                                                               ------>MYB83
                                                                               ------>MYB46(1)
                                                                               -------->P
            ----------->HVH21                                                <---------MYB46(2)
---ICU4   <------MYB83                                                       <---------MYB59
-->ATHB12 <------MYB46(1)                                                    <---------MYB111(1)
--ATHB12  --------->At4g35610                         --------->ZAT6      <-----------GT1          <
->ICU4    --------->ANAC55(2)                       <-----------GT1     <---------ANAC58         ---
--YAB1    <---------ANAC55(2)                  <---------AHL20(2)       <---------ANAC58         <--
->ATHB5  --------->MYB59                      <---------AHL20(2)     <----------DOF2    --------->ZAT14
->ATHB1  --------->MYB46(2)---------->DOF2<----------DOF2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)    <--
 
tgggagaaaaattaggtgaccttcatatgaaaaagatagagtagacttttttatttaacactacttggaagactttcttacctactctcactatagaccc  27070500
                                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                                 --------->ANAC58
                                                 --------->ANAC46
                                                --------->SPL7
          --------->LBD16                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
        xxxxxxxxxxxxxxxx>smallRNA(i)        <---------------AtSPL8
        <---------LBD16                     <---------------AtSPL3                               ---
      <---------ARR14(2)             <-----------------AGL3                                      ---
      --------->ARR14(2)         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                     <xxxxxxxxx
 <-----------HVH21              <----------TaMYB80 ------------>CBF                      ===========
-------TEIL                     --------->GLK1(1)--------->ANAC58                        <----------DOF2
------>ARR14(2)             <---------ANAC46--------------->AtSPL8  ----------->GT1  <---------ALFIN1
-------GLK1(2)             <---------LBD16<------------CBF        <---------LBD16  --------->AtMYB61
-------ARR14(2)      ------------>CBF----------------->AGL2  <-----------HVH21  <-----------GT1  ---
 
gattcgtcagaaccgggttttggattcaatttcggataacccctaaattggtacgccaattctcagtcactcggaaaaaaaaaaaacctcacctttgtcc  27070600
           <-----------HVH21
           <---------PCF2
          <------MYB83
          <------MYB46(1)
         *TSS                                                          --------->HSFC1(2)
        --------->ALFIN1                                               --------->HSFB2a(1)
      ===================================bZIP_DOF                      <---------HSFC1(2)
      <---------TGA1a                                               <---------ALFIN1
------->TEIL                                                       ----------->HVH21
------>ANAC46                            ------>ZmHOX2a(2)         --------->MYB46(3)
------>ANAC58                       <---------WOX13(1)             --------->ANAC58
xxxxxxxxxxxxxxsmallRNA(si3)   <----------DOF2                 ------>NtERF2                   <-----
================bZIP_DOF    <---------HSFC1(2)     --------->ZAT14 --------->ANAC58   <---------TOE2(3)
------>ANAC58               --------->HSFC1(2)    <----------DOF2  --------->ANAC46  --------->MYB52(1)
 
acgaatcgcaagtgggtcatagaaaaatcgaagcttttgactgatctcagtcactttagtctctctgcccacgacccttctcgtctactaagggttatct  27070700
                                <---------ANAC55(2)
                                <---------ANAC58
                                <---------ANAC58
                     <-----------HVH21
                    <----------DOF2                                    --------->HSFC1(2)
               <<<<<<<GRF7      --------->ANAC55(2)               <-----------RAV1(2)
             ----------->HVH21  <---------ANAC55(1)              <---------At4g35610   <---------At4g35610
      <---------ALFIN1  <---------TOE1(3)              <---------ANAC46<---------HSFC1(2)          <
------GT1    ------>ZmHOX2a(1)<-----------GT1----------->GT1  <-------TEIL   ------>ZmHOX2a(1)     <
 
ccatttgcccctcttcctgacaactttcaggtattacttgtcaataagatgtgaaattgagtatgtgcatcagatgtttcctctagattgaactgattcc  27070800
                --------->ANAC58
                --------->ANAC46
             <---------ARR14(2)
           --------->DEAR3(1)
           --------->RAP2.3(3)
         --------->At4g35610
         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)
         --------->LBD16    <---------ANAC46
       <---------LBD16      <---------ANAC58                                       <---------ARR11(3)
    --------->CCA1(2)       <---------ANAC58                                       <---------ARR14(2)
    <---------GLK1(1)      <---------MYB46(3)                                      --------->ARR14(2)
----------DOF2  --------->ANAC58   <---------YAB1                                  --------->ARR11(3)
xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           <---------ZAT18                    <---------CCA1(2)
 
acctttgatatgcgcagacacgaaaactgatgggtgtgatcaatgttcagggctctccatcgttctctattcattcttcagagtcaaatcttcgaaagtc  27070900
                                                                          --------->GLK1(2)
                                                                          --------->ARR14(2)
                                                                          <---------ARR14(2)
                                                                          ------->TEIL
                            --------->LBD16                    --------->ZAT2
                           <---------ANAC55(2)                 --------->At4g35610
                           --------->ANAC55(2)                 <---------At4g35610
                           --------->ANAC46                    <---------ZAT2
                          <---------LBD16                   <---------ZAT14
                        --------->ARR14(2)                  --------->ZAT14
                        <---------ARR14(2)                  --------->ZAT18
                     <---------------AGL15                  <---------ZAT18
               <----------DOF2     ----------->GT1         --------->ALFIN1
  <----------DOF2   <-----------------AGL1   <---------At4g35610    <---------ETT(2)              --
 
tcgagctttgaagaaacccttttgctcaatccggaatagggtttattgtgctcagtcttcaagtgcagctgtagacgaatccaagaatataactatggga  27071000
                                                                     <<<<<<<<<RAP2.2
                                                                    <---------TOE2(3)
                                                              <---------ARR11(3)                 ---
                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ---
                                                          <---------At4g35610                   <---
                                                         <---------TOE2(3)                      <---
                                                     <----------DOF2<---------YAB1     <---------AHL20(2)
                                                   --------------->AGL15           --------->AHL20(2)
                                                  ----------------->AG             <---------AHL20(2)
            <---------ALFIN1     <---------ANAC58 <-----------------AGL1          --------->AHL20(2)
     <-----------GT1             <---------ANAC58 ----------------->AGL1          <---------AHL20(2)
 <----------DOF2                <---------At4g35610<---------------AGL15          <---------AHL20(1)
------->GLK1(2) xxxxxxxxxxxxxxxx>smallRNA(i)    <-----------GT1--------->ICU4     --------->AHL20(1)
 
gactcttttatccgtccacatttgagacaattggctgcttatcagccaattttaccctttgaggtgatatttagattgcattgaatttattttttgacaa  27071100
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AGI:  At1g71920.1   
Description:  histidinol-phosphate aminotransferase, putative. Identical to Histidinol-phosphate aminotransferase, chloroplast precursor (HPA2) [Arabidopsis Thaliana] (GB:Q949X3;GB:Q6S4C1;GB:Q6S4D6;GB:Q9LD56); similar to EMB2196/HISN6A/HPA1 (EMBRYO DEFECTIVE 2196) [Arabidopsis thaliana] (TAIR:AT5G10330.3); similar to EMB2196/HISN6A/HPA1 (EMBRYO DEFECTIVE 2196), histidinol-phosphate transaminase [Arabidopsis thaliana] (TAIR:AT5G10330.2); similar to EMB2196/HISN6A/HPA1 (EMBRYO DEFECTIVE 2196), histidinol-phosphate transaminase [Arabidopsis thaliana] (TAIR:AT5G10330.1); similar to Histidinol-phosphate aminotransferase, chloroplast precursor (Imidazole acetol
Range:  from: 27070610    to: 27072828    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.