Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------AHL20(2)                            <---------RVE1(1)                                             <----------                            <---------CCA1(1)                                      --------->AHL20(2)                           --------->ARR11(3)                --------->ARR14(2)    <---------AHL20(2)                           <---------ARR11(3)       --------->AHL20(2)            <---------AHL20(2)                        --------->HSFC1(1)         <---------AHL20(2)          --------->AHL20(2)                  --------->ARR11(3)               --------->AHL20(2)          <---------AHL20(2)                  <---------ARR11(3)           --------------->AGL15           --------->ATHB51                  --------->ARR14(2)     --------------->AtSPL8                -------->ATHB1      <---------ARR11(3)--------->HSFB2a(2)   ----------------->AGL3          --------->ICU4     ----      --------->ARR11(3)<---------HSFB2a(2) <-----------GT1  <---------ARR14(2)<--------HAHB4  ------  ---------->DOF2 <---------ARR14(2)  <----------DOF2     <---------TOE2(3)   <---------ATHB51 ------   aaatcaaagacatttcttagtatcttctagatatttcattcttttagtaccatataaattagggatttggacaattcacaattatttattttaaaccaaa  27057400   -------->HAHB4   <--------ATHB1   --------->ATHB51   <---------ICU4  <---------YAB1  --------->AHL20(2)  <---------AHL20(2)  <---------ATHB51  --------->ICU4 --------->AHL20(2)                     <---------------AtSPL3 <---------AHL20(1)          <---------ANAC46 -GT1                     ----------->HVH21      --------->AHL20(2)            --------->MYB46(3) ----->YAB1           --------->At4g35610        <---------AHL20(2)           --------->ANAC46 >MYB83          --------->YAB1         <---------------AtSPL8    --------->AHL20(2)      --------->YAB1 >MYB46(1)     <---------MYB52(1)--------->ANAC55(2)              <---------AHL20(2)--------->YAB1 <-   caaaataattgttctccgataatcagatgtgacttatgtgatatagtacatataaatatacacactgtttaaatttgtctacccaatcggaatcatagaa  27057500                                                 --------->AHL20(2)                                                <---------YAB1                               --------                                             <---------YAB1                                  <-------                                        <---------DAG2                                   <-----------HVH21                                <---------ARR14(2)--------->AHL20(2)                    --------->bZIP60(2)                                --------->MYB52(1)<---------AHL20(2)                    --------->ANAC58                     <---------------AtSPL8  <---------AHL20(2)                         --------->ANAC58 ---------DOF2     --------->MYB52(1)   <----------DOF2      <-----------HVH21          --------->ANAC46   actttattgtttacccaaacaaaacggtactgaatatcggaactttttttattaaaaaaaaactgtgagagagaaattgaatcaacgtccaagtcacttg  27057600                                                                                         <---------ANAC58                                                                                         <---------ANAC58                                                                                       ------>MYB83                                                                               <-------MYC3                                                                               ------->MYC2                                                                               <-------MYC2                                                                               ------->MYC3                                                                               -------->ABF1                                                                               ------->MYC4                                                                               <-------MYC4                                                                              <---------TGA1a                                                                              ==================MYC_MYB                                                                              --------->ANAC55(2)                                                                              --------->TGA1a                                                                              <--------ABF1                                                                              <---------O2                                                                              <---------ANAC55(2)                              --------->LBD16                                 --------->O2                             ----------->GT1                              <-----------HVH21                             --------->ANAC46                            ===============MYC_MYB                             --------->LBD16                   <---------TOE1(3)       ------>MYB46(1)        --------->DAG2      <---------LBD16               <---------ZAT6 ------->GAMYB -------->P       ---------->DOF2<---------AHL20(2)                  ----------->GT1----------->HVH21  --------->ANAC58    --------->AHL20(2)               <------ZmHOX2a(1)<------------AtMYB77  --------->ANAC58   --------->AHL20(2)             <-----------RAV1(2) ================MYC_MYB ->ANAC55(2)         <---------AHL20(2)       ==========================================bZIP_DOF --ANAC55(2)      --------->WOX13(1)          ---------->DOF2  <---------TOE2(3)      <---------ALFIN1   atgcaagaaaaaagcgaaaccaattaaattcccgtaaaaacagaacacaaaagaacaggagagttaatgttctaactgacacgtgtccctaccttgccat  27057700           <---------AHL20(2)                    --------->At4g35610           --------->AHL20(2)                  --------->YAB1          --------->YAB1                       <---------ICU4          --------->AHL20(2)                --------->YAB1                                     <<<<<<    --------->ANAC58                     --------->YAB1                --------->YAB1       <<<<<<<<<TBF1    --------->ANAC46                 --------->LBD16           --------->YAB1              xxxxxxxxxx    --------->ANAC58                --------->ANAC46     ----------->GT1               <---------CCA1(2)   acactcacacaattaaaatttctaactctgtctcttatccgaaaaataatcatctccaagtgtaataagaaaatcaaaataaaactctcatttcttcttc  27057800                                          *TSS                                          -------------        --------->AHL20(2)           --------->REM1(1)                                 <----------ID1 ------>ZmHOX2a(1)                   --------->ANAC46                            ----------->GT1 <<<TBF1----------->TBP            ------>ZmHOX2a(1)                            --------------------- xxxxxx>smallRNA(i)           <---------At4g35610     --------->TOE2(3)--------->MYB52(1)          --   ttcctcgcctataaatacaactccattctctcatctcctacatcacaaaacaaaaacctcacttaaaaaaaaaaaacagaagacagaaaaaaacaaaaaa  27057900          >>>>>>>>>>GT-3b       <----------ID1                                                                  --------->LBD16       ----------->GT1                                                                 <-------------     ---------->DOF2                                                                   ------>ZmHOX2a(1) <----------ID1                       <-----------GT1                                  -------------- ----------->ANAC81        <----------DOF2   ---------->DOF2                    <-----------GT1 --->ANAC81             <-----------GT1   ------>ZmHOX2a(1)       <---------ANAC58    <-------------- -------->DOF2--------->AHL20(2)<----------DOF2                   <---------ANAC58    <--------------   aaaaagaaaaagaaaaataaacaaattttcttttcttttttttcctctaaagtttctattttgtctattcgtgtttttttttttacttcctgataatggg  27058000                                  <------NtERF2                                 <---------DEAR3(2)                                 <---------RAP2.3(1)                                 <---------RRTF1(1)                                 <---------ERF1                                 <---------ATERF1(1)                                 ------>NtERF2                                <---------RAP2.6(2)                                <---------RAP2.3(2)                                --------->DEAR3(1)                                <---------DEAR3(1)                                <---------RAP2.3(3)                               <---------At4g35610                               ------>NtERF2                               <------NtERF2                              <---------RRTF1(1)                              <---------ATERF1(1)                              <---------RAP2.3(1)                              <---------DEAR4(2)                             <---------RAP2.3(2)                          --------->ARR14(2)                             <---------RRTF1(2)            --------->ARR11(3)                             <---------RAP2.6(2)           <---------ARR11(3)     ----------->GT1                             <---------DEAR3(1)           <---------HSFB2a(1) --------->At4g35610                            <---------LBD16               --------->HSFB2a(1) <---------At4g35610                            <-------TEIL               <------NtERF2   ------->GAMYB                      ---------->DOF2               <------NtERF2      --------->AtMYB61            < --AGL15            <---------MYB52(2)              <---------LBD16   --------->MYB46(3)         <--- ->AGL15           ------>MYB83--------->ATERF1(1)<---------DEAR3(1)<-----------GT1             ----- ---AGL2           ------>MYB46(1)--------->At4g35610 --------->LBD16-------->P   <---------ANAC46<-- ---AGL3 ----------->GT1  --------->ARR11(1)    <-----------HVH21 <------ZmHOX2a(2)         ---------   agcctatgaaacagaaaaaccaactaaagatgcggcggctctagagacacagtcgccggaagatttcgatcaaccatctccgcttcgtaaaatcatctcc  27058100                    <---------ZAT14               --------->LBD16             --------->ATERF1(1)             <------NtERF2            ------>NtERF2            --------->ABI4(1)           --------->RAP2.3(2)           --------->ATERF1(2)           --------->DEAR3(1)           <---------ATERF1(2)           <---------DEAR3(1)          --------->DEAR4(2)                                              --------->ANAC46          --------->ORA47(2)                                             ------>ZmHOX2a(1)          --------->ATERF1(1)                                    <-------TEIL          --------->RAP2.3(1)                                ------->TEIL--------->LBD16          --------->ERF1                                     <---------TOE1(2)         <---------ATERF1(1)             --------->At4g35610 --------->SPL7   --------->GLK1(1)        --------->DEAR3(1)               <---------At4g35610 <-------TEIL--------->HSFB2a(2) ---------DEAR3(2)<---------ZAT14     ---------->DOF2       <---------MYB52(1)<---------GLK1(1) --------HVH21<---------DEAR3(1)   <----------DOF2          <---------SPL1(1)<---------GLK1(2)  <---- ---->ANAC46<---------ATERF1(1) ----------->TCP11(1)       <---------SPL7<---------LBD16        ----- -------MYB52(1)  --------->ZAT14<---------PCF2          <---------------AtSPL3                 <---- >At4g35610--------->RAP2.3(3)--------->ALFIN1           --------------->AtSPL8             <--------   gtcgcttccatcgccgccggtgtacagttcgggtgggccttacagctctctcttcttactccgtacgttcaactcctcggaatccctcacaaatggtcat  27058200                                                                                           <------NtERF2                                                                                           --------->ATERF1(1)                                                                                          <---------ATERF1(1)                                                                                          ------>NtERF2                                                                                         --------->DEAR3(1)                                                                                        <------NtERF2                                                                                   <------MYB46(1)                                                                                   <------MYB83                                                                                  --------->MYB59                                                                               --------->ARR14(2)                                                                           <-----------------AGL3                                                  <---------MYB46(3)       ----------------->AGL3                                                  <---------DEAR3(2)       ----------------->AGL1                                                 <---------TOE2(2)         ==========================                                 <---------WOX13(1)                        <-----------------AGL2                               --------->ATHB12  <---------DEAR3(1)        <-----------------AGL1----                          --------->LBD16        <---------TOE1(2)         ----------------->AGL2<---                          ------>NtERF2      <---------ATHB12           <------MYB46(1) --------->ATERF1(1) -----At4g35610          --------->ANAC46 --------->AtMYB61             <------MYB83    --------->RAP2.3(1) ---->At4g35610         <---------LBD16  --------->MYB46(3)            --------->MYB59 <---------ATERF1(1) -----CCA1(2)   --------->PCF5<---------YAB1------>MYB83            <---------REM1(1) <---------DEAR3(1) ---HVH21  <-----------RAV1(1)--------->ICU4------>MYB46(1)  ----------->HVH21 <---------ARR14(2)====   ctctcatttggctctgtggtccagtctccggcatgattgttcaaccaatcgtcggtttccacagtgaccgatgtaggtccaaatttggtcgccgtcgtcc  27058300  Previous    Next  AGI:  At1g71880.1    Description:  SUC1 (SUCROSE-PROTON SYMPORTER 1); carbohydrate transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen ion symporter. Identical to Sucrose transport protein SUC1 (SUC1) [Arabidopsis Thaliana] (GB:Q39232); similar to ATSUC6 (SUCROSE-PROTON SYMPORTER 6), carbohydrate transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT5G43610.1); similar to ATSUC5/SUC5 (SUCROSE-PROTON SYMPORTER 5), carbohydrate transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT1G71890.1); similar to SUC2 (SUCROSE-PROTON SYMPORTER 2), ca Range:  from: 27057842    to: 27060003    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.