Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------YAB1                                       <---------AHL20(2)                                      --------->YAB1                                      --------->AHL20(2)                                   --------->YAB1                                ----------->GT1                              <---------ANAC58                            --------->ZAT2                                   <---------ANAC46                            --------->At4g35610                              <---------ANAC58                            <---------At4g35610               --------->ARR11(3)                            --------->TGA1a                   <-----------ARR10                            <---------ZAT2                    <---------ARR11(3)                           <---------TOE2(2)                  <---------ARR14(2)                           <---------TOE1(2)                  --------->ARR14(2)                          <-----------RAV1(2)         ----------->GT1       <-------TEIL                     <-----------RAV1(1)        --------->ANAC58        <---------TOE2(3) --->MYB52(1)        =================RAV       --------->ANAC58        <---------TOE1(3) >YAB1    <-------TEIL<-----------HVH21--------->AHL20(1)    <---------CCA1(2)        <-----------GT1   ctgtggaacaggtccatggactaatgtcgcaggtgagtaataatattgaaacgaaatggtgacatatctcccttaaggttcgtgtatttcacagactcaa  26857800                                                                                         <------ZmHOX2a(2)                                                                                        <---------ARR14(2)                                                                                     <---------TOE1(2)                                                                                   <-----------HVH21      <---------YAB1                                                              <---------O2    --------->ATHB12                                           ----------->RAV1(1)--------->O2    --------->YAB1                                            --------->MYB46(3)  --------->TGA1a    -------->ATHB1                                          ----------->RAV1(1)   <---------TGA1a   <    <---------ICU4         ---------->DOF2          <-----------TGA1         ----------->HVH21      <   <---------YAB1 <--------P                        <-----------HVH21     <---------ALFIN1------>ZmHOX2a(2)   <---------ATHB12 <------MYB46(1)                <---------ANAC58 --------->ARR14(2)  --------->ARR14(2) --------->WOX13(1) <------MYB83     -------->ATHB1<---------ANAC58 <---------ARR14(2)<---------DEAR3(2)   aatccatcattgttgtacttgtaggtcataaaagatgaattattcaactcaatgcgtcagtccaacaacaaatctcccactgactcgtcggatccagacc  26857900                                                      --------->ATHB12                                                      <---------ICU4                                                     <---------ATHB12                                                  --------->MYB46(3)                              ---                                               <---------WRKY18(1)                               <---                                              --------->WRKY38(1)                       ---------->DOF2             <---------TOE2(3)                ----------->HVH21                      <---------ANAC46      <---------ANAC55(2)                    <---------WOX13(1)          <---------AHL20(2)     <----      --------->ANAC55(2)          --------------->AGL15                 --------->AHL20(2)     ----- <---------ICU4                    <---------------AGL15          ------>ZmHOX2a(1)<---------ANAC46 --------->YAB1                   <-----------------AGL3  <-----------RAV1(1)     <---------MYB52(1) --------->ATHB12                 <-----------------AGL2  <---------MYB46(3)    <-----------RAV1(1) ---------YAB1                    <-----------------AG<--------HAHB4    --------->AHL20(2)      ----- ---------ATHB12         <----------DOF2    <------------CBF      <----------DOF2<-------GAMYB ------   ctatgattacatattgaagttgctcttcttttggtttctagttttggattgacccatcatttgttgtcctttcatttattttctgttgtgtaaagaatta  26858000                                   ---------->DOF2       --------->YAB1     <---------ARR14(2)                                        --------->YAB1 --------->YAB1           <---------GLK1(2)                                     <---------KAN4(1) ------>YAB1              --------->ARR11(3)                                    --------->KAN4(1) ------YAB1               <---------ARR14(3)                             ---------->DOF2 -----AHL20(2)            <---------ARR11(3)                          <-------GAMYB --------->TOE2(3) ---->AHL20(2)            --------->ARR14(3)                        <------NtERF2--------->YAB1 ---->AHL20(1)          ----------->ARR10                         <---------DEAR3(1)--------->TOE1(3) --->YAB1    --------->YAB1   <---------TOE2(3)               <-------TEIL     <---------KAN4(2)   taatgctaatgagaataatacagaagaagattttggttaaagaaatgtttttaagcccattcgattcgtcggggttaaaggaataatcttaagcccttaa  26858100                                                                                                -----                                                                                               ------                                                                                               ------                                                                                     <---------ANAC58                                                                                     <---------ANAC58                 --------->GLK1(1)                                               --------->WRKY38(1)                 <---------GLK1(1)                                               --------->WRKY12             <---------TOE2(3)      <----------DOF2                    <---------ZAT18         <-----          --------->ICU4         <---------ARR11(3)                    <---------ZAT14  --------->REM1(2)         <-----------TBP         --------->ARR11(3)         <----------DOF2   <---------O2     <-----   <------------CBF --------->YAB1 ------>ZmHOX2a(2) <---------ALFIN1  --------->ZAT14--------->LBD16   acaaaaattgtatttatggaaatcagaaacctagtgatcttttccaactctatcccctctctctttccttctctgcactcacgttgtccgtgaataggtg  26858200                                                                                        --------->RAP2.3(3)                                                                                      ------>NtERF2                                                                                      <---------ATERF1(1)                                                                                     --------->DEAR3(1)                                                                                    --------->ATERF1(1)                                                                                   <---------ATERF1(1)                                                                                   ------>NtERF2                                                                ------>ZmHOX2a(1) <---------DEAR3(1)                             <----------DOF2              --------->ALFIN1        --------->DEAR3(1) ------>GT1              --------->YAB1                --------->DAG2       <---------ETT(2) --->ALFIN1   ------------>CBF                <-------GAMYB    <---------ANAC58  <------------------- --------->AtSPL8       <---------ATHB12     <---------MYB46(3)<---------ANAC58 ------>NtERF2 ----------AtSPL3     --------->WOX13(1)     --------->MYB52(2)<---------ANAC46--------->DEAR3(1) ----------AtSPL8   ------------>CBF   <----------DOF2---------->DOF2       --------->ETT(2) --------   gtactaaaacatggctaacaatggcaatcatctttctctgtctttgtttgttgatgaaaagtgttccttatgggactgtcgacgacgacgcccacaagga  26858300                                                                                                   --                                                     --------->ANAC46                            ----                                                   --------->ANAC58                              <---                                                   --------->ANAC58                              <---                                                   --------->ANAC46                              ----                                                --------->ZAT14                                  <---                                                <---------ZAT14                                 <----              ----------->HVH21              ------->TEIL                                   ---------            ----------->RAV1(2)            <---------ZAT18                                 <---------ANAC58           ------>MYB46(1)                 --------->ZAT18                                 <---------ANAC46 --WRI1    ------>MYB83                   --------->ANAC58                                 <---------ANAC58 ->ANAC46  -------->P                     --------->ANAC58                                <---------LBD16   gctatgtactgccaacctgaccatcttcaacaagcttatcaagaacgcacttcacacaacatggcaaacttatacacttgaagacgtagtattgcggaga  26858400                           <---------ANAC46     ------>MYB83                       --------->ZAT2 <---------LBD16                       --------->HSFC1(2)       ------>MYB46(1)                       <---------HSFC1(2)     --------->AtMYB61                       <---------ZAT2<---------LBD16                       <---------HSFB2a(1)    <---------MYB46(2)                       <---------At4g35610    <---------MYB59    ---------->DOF2    --------->HSFB2a(1)    <---------MYB111(1)                            -------- ------->TOE2(3)       --------->At4g35610 --------->GLK1(1)                                 <------- ----->GLK1(2)        <-----------ARR10--------->LBD16                                      <-------- --------ARR10        <---------ARR14(2)  <---------ARR14(2)                                --------- ------ARR14(2)       --------->ARR14(2)  --------->ARR14(2)                             --------->ANAC58 ----->ARR14(2)     --------->LBD16  <---------ANAC46            <---------MYB52(1)   <---------SPL7 ------ARR11(3)    --------->ANAC46 <---------LBD16--------->TOE2(3) <---------MYB52(1)  --------->ANAC58 -----GLK1(2)     <---------LBD16<---------GLK1(1) --------->TOE1(3)<-------GAMYB     --------->LBD16 >LBD16  --------->TOE2(3)<-------TEIL--------->LBD16           <-----------HVH21   <---------LBD16   atcttagaaagccttagttatccggagcttcgtggaagtccggggataccaaaccttcaagaaaacagtcagttattgtctatagctccgcacggatatg  26858500                                                                                             --------                                                                                             --------  ------>ZmHOX2a(1)                                           <---------ETT(1)              --------- ->GLK1(1)                                              <---------ANAC58                <------------ --GLK1(1)                         <-------MYC3         <---------ANAC58               ---------->DOF2 -ARR14(2)          <---------ANAC46    <---------MYB46(3)    ----------->HVH21    ----------->GT1<-- >ARR14(2)     <---------REM1(1)   ------->MYC3     <----------DOF2      --------->ALFIN1  --------->MYB52(1)   tttcctacaaatttgacatgtagcgagaaacatagcatatggctgtttctcgcgctgttcgtgcccgaccaaggggtttggaaactggttaaagaacggc  26858600                       --------->AHL20(2)                    --------->AHL20(2)              <---------ANAC58              <---------ANAC55(2)  <---------TOE1(2) <---------AHL20(2) ->ANAC58     <---------ANAC58                                                 ----------->GT1 ->ANAC58--------------->AtSPL8                                 --------->At4g35610  --------->DAG2 >RAP2.6(3)   --------->ANAC55(2)------->MYC3             --------->TOE1(2)  <---------At5g28300 ---AtSPL3   <-------TEIL        <-------MYC3     <---------MYB46(3)   <---------TOE2(3)       ------ ----NtERF2  ------->TEIL  <-----------GT1  <<<<<<<<<<<<<<<<<LFY<---------At4g35610 ---------->DOF2 <   atcgaaggaactatgtacgtgataaatttataccacgttttgctatgaacaatggttcaacatgggagctatataggtttacagtgaaaagtgactctgt  26858700  Previous    Next  AGI:  At1g71230.1    Description:  AJH2/CSN5/CSN5B (COP9-SIGNALOSOME 5B); protein binding. Identical to COP9 signalosome complex subunit 5a (CSN5A) [Arabidopsis Thaliana] (GB:Q9FVU9;GB:O82523); similar to AJH1/CSN5A/JAB1 (COP9 SIGNALOSOME 5A) [Arabidopsis thaliana] (TAIR:AT1G22920.1); similar to JAB [Lycopersicon esculentum] (GB:AAG43411.1); contains InterPro domain Mov34-1 (InterPro:IPR003639); contains InterPro domain Mov34/MPN/PAD-1 (InterPro:IPR000555) Range:  from: 26856123    to: 26858058    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g71235.1    Description:  unknown protein Range:  from: 26858221    to: 26858884    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.