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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ANAC58
--------->
TGA1a
<---------
O2
<---------
ANAC55(1)
==================
<---------
bZIP60(2)
==================
--------->
ANAC55(2)
<---------
ANAC58
<---------
ANAC55(2)
----------->
TGA1
--------->
MYB52(1)
----------->
HVH21
------>
MYB83
--------->
LBD16
--------->
AtMYB61
------>
MYB83
--------->
O2
--------->
ARR14(2)
<---------
MYB59
<---------
ARR14(2)
------->
TEIL
--------->
TOE2(3)
<----------
ID1
--------->
MYB52(1)
<---------
ARR14(2)
--------->
ARR11(3)
--------->
MYB46(3)
--------->
ARR14(2)
<---------
ANAC55(2)
<---------
ARR11(3)
--------->
DEAR3(2)
------>
MYB46(1)
----------->
HVH21
--------->
ANAC55(2)
<---------
GLK1(2)
------>
MYB46(1)
<---------
MYB59
<---------
TGA1a
-------->
MYB52(1)
--------->
SPL7
>>>>>>>>>>
MYB80
--------->
MYB52(1)
<---------
ANAC46
----->
YAB1
<-----------
HVH21
<---------
ATHB12
----------->
GT1
<---------
LBD16
<-----------
HVH21
cataacgtatttgtaaactcgtccgtccaaaatctcaaatcaaaccaaaccgacaaaccagtaaaaaaaccgaaccggaaaactgacgtgtcagtgtctg
26855700
<---------
HSFB2a(2)
<---------
YAB1
--------->
AHL20(1)
<---------
ANAC58
<---------
AHL20(2)
<---------
ANAC55(1)
--------->
AHL20(2)
<---------
ANAC55(2)
<---------
AHL20(1)
<---------
ANAC58
--------->
AHL20(2)
<---------
ANAC46
<---------
AHL20(2)
--------->
ANAC55(2)
--------->
AHL20(2)
--------->
ANAC58
<---------
AHL20(1)
--------->
ANAC58
--------->
AHL20(1)
--------->
DAG2
--------->
DAG2
--------->
AHL20(2)
---------->
DOF2
<----------
DOF2
---------->
DOF2
<---------
ATHB12
--------->
ANAC58
============
bZIP_DOF
----------->
HVH21
--------->
At4g35610
<---------
AHL20(2)
--------->
GLK1(1)
============
bZIP_DOF
---------->
DOF2
<---------
YAB1
--------->
AHL20(2)
--------->
ANAC58
tataaaaagcaatacgtgttcttttagcaaagggtctgacactctgatagaaaagctgaagtaattcaataaattattttagaagagggaagaaatctac
26855800
<---------
AHL20(2)
--------->
ATHB12
<---------
ATHB12
<---------
YAB1
--------->
ICU4
<---------
AHL20(2)
<---------
TOE2(3)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
--------->
GLK1(1)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
GLK1(1)
<---------
MYB52(1)
--------->
AHL20(2)
<---------
AHL20(2)
---------->
DOF2
----------->
GT1
<---------
ICU4
<---------
MYB52(1)
<---------
YAB1
----------->
RAV1(1)
--------->
AHL20(2)
----------->
GT1
--------->
AHL20(2)
--------->
ZAT6
--------->
AHL20(2)
--------->
YAB1
ggttttacaaggggacgttatttattaatggattttaatagaaagaaatccaacactaatacactgttatttaattaatgattttaaattcaattttaaa
26855900
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
--------->
ICU4
<---------
ARR11(3)
--------->
YAB1
--------->
AHL20(2)
<---------
ATHB12
<---------
AHL20(2)
--------->
ARR11(3)
<---------
ARR11(3)
--------->
YAB1
--------->
ATHB12
<XXXXXXXXXXXXXXXXXXXX
MIR867
--------->
WOX13(1)
<---------
YAB1
<---------
ARR11(3)
--------->
ARR11(3)
<---------
AHL20(2)
----------->
GT1
<---------
ZAT6
<---------
CCA1(2)
<---------
AHL20(2)
<---------
ZAT6
--------->
ARR11(3)
atttagtgttattggagtttatatctttgtaaatcatgtttaatagattttaaaattttgtgttattcaattaaaagattttaataccgtcaaaaaaaaa
26856000
<---------
ICU4
--------->
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
<------
ZmHOX2a(1)
<---------
DAG2
<---------
AHL20(2)
--------->
LBD16
<----------
DOF2
--------->
AHL20(2)
--------->
GLK1(2)
<-----------
GT1
---
---------->
DOF2
<---------
AHL20(2)
<---------
ARR14(2)
<---------
ALFIN1
-----
<----------
ID1
<------
ZmHOX2a(1)
--------->
ARR14(2)
<-----------
GT1
----------->
TBP
aaaaaaaaaacaaactaaaaggattttaaattttatttctaaattagagaagaatccagaggaattaattttcaccacttttctcttcttatatataagt
26856100
--------->
LBD16
<-----------
GT1
<---------
ANAC58
--------->
LBD16
<---------
ANAC55(1)
--------->
LBD16
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
<-
<---------
HSFB2a(2)
--------->
ANAC46
--
--------->
LBD16
<------
ZmHOX2a(2)
--------->
ANAC55(2)
-----
--------->
HSFB2a(2)
<------
ZmHOX2a(2)
<---------
ANAC58
<------
<---------
LBD16
--------->
ZAT2
<---------
ALFIN1
-------
------>
WOX13(1)
--------->
At4g35610
<---------
ANAC46
<---------
GLK1(1)
------->
CBF
*
TSS
<---------
At4g35610
<---------
ANAC55(2)
--------->
HSFB2a(2)
caatccccgaagtaacattttt
gacacagttttcaattcttcagcagacagatcgatcacactccatcgattccgtatgaaaccctagatttctgcaact
26856200
<---------
DEAR3(1)
--------->
DEAR3(1)
--------->
ATERF1(1)
<---------------------
WRI1
<------
NtERF2
------>
ZmHOX2a(1)
<---------
DEAR3(1)
<---------
MYB59
<-------
TEIL
-----------
----------------->
AGL1
<---------
HSFB2a(1)
<---------
At4g35610
--------
GLK1(1)
--------->
HSFC1(2)
--------->
At4g35610
------->
GLK1(1)
<---------
HSFC1(2)
<---------
ZAT18
-->
GAMYB
--------->
HSFB2a(1)
--------->
ANAC58
<---------
ZAT14
---
At4g35610
<---------
ANAC46
--------->
ANAC58
--------->
ZAT14
-->
At4g35610
---------->
DOF2
--------->
MYB52(2)
--------->
CCA1(2)
--------->
ZAT6
-
gaattcctaattcgaaaaaga
atggagggttcgtcgtcgacgatagcaaggaagacatgggaactagagaacagcattctaacagtagactcacctgatt
26856300
<-
<-
<--
--------->
TOE2(3)
-
------>
ZmHOX2a(1)
<--
--------->
ARR11(3)
=========================
------>
NtERF2
------>
ZmHOX2a(2)
---
<---------
ETT(1)
--------->
ARR11(3)
<--
----------->
HVH21
<---------
ARR11(3)
---
--------->
TOE1(2)
--------->
ALFIN1
<----------
DOF2
<--
--------->
TOE2(2)
<---------
ARR14(2)
=========================
------->
GAMYB
--------->
ZAT14
--------->
ANAC46
--------->
KAN4(1)
---
>
RAV1(2)
<---------
ARR11(3)
<---------
ZAT14
--------->
HSFB2a(2)
<---------
KAN4(1)
<--
-------->
MYB46(3)
<---------
ARR14(2)
<---------
HSFB2a(2)
<---------
KAN4(2)
<-----------
GT1
caacctccgacaacatcttctactacgacgatacttcacagactaggttccagcaagagaaaccgtgggagaatgatcctcactactttaaacgagtcaa
26856400
<---------
ZAT18
<---------
At4g35610
--------->
At4g35610
---------->
CDC5
-----
ZmHOX2a(2)
--------
GLK1(1)
-------
AGP1
----->
ZmHOX2a(2)
-------
ARR14(2)
======
HOX2a_HOX2a
------>
ARR14(2)
-------
ARR14(3)
------>
ARR11(3)
--------->
ANAC46
-------
ARR11(3)
--------->
ANAC58
--
=====
HOX2a_HOX2a
--------->
ANAC58
--------->
ICU4
--
------>
ARR14(3)
<---------
MYB46(3)
<---------
ATHB51
<--
---------
ARR10
--------->
ALFIN1
<---------
MYB46(3)
----------->
GT1
gatctcagcgctcgctcttcttaagatggtggttcacgctcgctctggtggtacaattgaaataatgggtcttatgcaaggtaagaccgatggtgatact
26856500
<---------
HSFC1(2)
<------
MYB46(1)
<----------
DOF2
<---------
DAG2
-
<---------
ANAC58
<---------
YAB1
-
<---------
YAB1
--------->
HSFC1(2)
<---------
ANAC58
-
<---------
TOE2(3)
--------->
HSFB2a(1)
<---------
ANAC58
<---------
<---------
YAB1
<---------
ANAC58
<---------
YAB1
<---------
ARR14(2)
------>
ATHB1
<----------
DOF2
<---------
HSFB2a(1)
<------
ZmHOX2a(1)
<---------
ANAC46
------->
YAB1
<---------
ANAC58
<------
MYB83
<---------
LBD16
<---------------
AtSPL8
---
-------
YAB1
<---------
ANAC58
<---------------
AtSPL8
<-----------
RAV1(2)
<-------
TEIL
--------->
ARR14(2)
atcattgttatggatgcttttgctttaccagtggaaggtactgagacaagggttaatgctcaggatgatgcttatgagtacatggttgagtattcacaga
26856600
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AGI:
At1g71230.1
Description:
AJH2/CSN5/CSN5B (COP9-SIGNALOSOME 5B); protein binding. Identical to COP9 signalosome complex subunit 5a (CSN5A) [Arabidopsis Thaliana] (GB:Q9FVU9;GB:O82523); similar to AJH1/CSN5A/JAB1 (COP9 SIGNALOSOME 5A) [Arabidopsis thaliana] (TAIR:AT1G22920.1); similar to JAB [Lycopersicon esculentum] (GB:AAG43411.1); contains InterPro domain Mov34-1 (InterPro:IPR003639); contains InterPro domain Mov34/MPN/PAD-1 (InterPro:IPR000555)
Range:
from: 26856123
to: 26858058
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.