Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <--------HAHB4                                                                                           --------->ATHB12                                                                                           <---------ICU4                                                                                          --------->ICU4                                                                                          <---------ATHB12                                                                                  <---------ARR14(2)                                                                                  --------->KAN4(2)                                                                                  <---------ARR11(3)                                                                                  --------->ARR14(2)                                                                                 --------->HSFB2a(1)                                                                                 <---------HSFB2a(1)                                                                                 <----------TaMYB80                                                                                 <---------GLK1(1)                                                                 <------ZmHOX2a(2)--------->ARR11(3)                                                       --------->TOE2(3)         <---------KAN4(1)                                                      --------->ANAC58           --------->KAN4(1)      --------->LBD16                                 --------->ANAC58           --------->GLK1(1) -------ARR11(3)                                      <---------ANAC55(2)       <---------KAN4(2) --->TOE2(3)                 ------->TEIL             --------->ANAC55(2)       ---------->TaMYB80 -->RAV1(1)          <---------ZAT2                   ----------->GT1   <-------TEIL --------->TOE2(3)   tatctctccagagatgaagtccaagctcatgaacatgagttttcttagtagtagaaacgtaagtacgatccatatacatgagaatatccctaatcatttg  26207700               --------->KAN4(2)              <---------ICU4             <---------YAB1                                                              --------->At4g35610            --------->ARR11(3)                                                           <---------At4g35610            <---------ARR11(3)                                                      <----------DOF2           --------->YAB1                                                      <---------ARR11(3)          <---------YAB1       --------->ANAC58           <---------At4g35610  --------->ARR11(3)          --------->ICU4       --------->ANAC58    ------>ZmHOX2a(1)          <---------CCA1(2)   <----------DOF2        ------>ZmHOX2a(1)       <---------ALFIN1          --------->ANAC55(2)   caacgctttgttatgatcattccatttcctattaagcaattctaaaaatgctcctccttgagcttcttcaatagacttacatatctctttgagatgaaat  26207800                                                                            <----------ID1                 ----------->GT1                                <---------ARR14(2)               --------->ZAT18 --------->YAB1                   --------->ARR14(2)       <---------At4g35610     ----------->GT1           <-----------GT1               <---------ANAC58            --------->At4g35610    <---------ZAT6    ---------->DOF2                        <---------ANAC58   --------->AtMYB61   gtcatagtggtaacaagtccagtataaagcttatcaccatacttatgtagaaccatgttgtatgcgtttctgaaataagcgaccaaagtttagcagaaca  26207900                                                 --------->ARR11(3)                                                 <---------ARR11(3)                                       ------->TEIL                        --------->GLK1(1)    ---------->DOF2                 ---------->DOF2     <---------ZAT18                         <---------YAB1         <                --------->YAB1       --------->ZAT18                    <---------ANAC58       ------              ------->TEIL          --------->ALFIN1                    <---------ANAC58    <--------         --------->CCA1(2)         --------------->AtSPL8        --------->ZAT18 ----------->GT1    <   acaacaacaagagatgaatcaaagtgaaatctatggaagtgtacctgtaaagctcttcgaaactgagaccactagcgttgtgattgtaaatctcatgaat  26208000            ------>ZmHOX2a(2)           <------ZmHOX2a(2)           --------->HSFB2a(1)           <---------HSFB2a(1)          --------->ARR14(2)          <---------ARR11(3)                                                               <---------YAB1          <-----------ARR10                     ------>NtERF2                 <---------HSFC1(2)          <---------ARR14(2)                --------->MYB46(3)                --------->HSFC1(2)          --------->ARR11(3)             <---------WRKY12                     <---------HSFB2a(1) ---------TOE1(2)                       <------ZmHOX2a(2)<---------ANAC46     --------->HSFB2a(1)  <- ->TEIL   <---------ARR14(3)    <---------ARR14(2)       <---------ANAC58 ----------->GT1<---------At4g35610 -YAB1    --------->ARR14(3)    --------->ARR14(2)       <---------ANAC58<---------HSFB2a(2)      --- ---------TOE2(2)            <---------ANAC46------->GAMYB<----------DOF2--------->HSFB2a(2)      <--   cgcatgttcaaggatcttccaagttttatcggcgtattttggatcaacgacgactcgttgcttaaacgcttcaatctggaaatttctcttcttctgatta  26208100                                                                                         <---------ICU4                                                                                         --------->YAB1                                                                                        --------->ICU4                                                                                        <---------YAB1                                                                                      --------->YAB1                                                                                      <---------ICU4                                                                ----------->GT1      <---------ATHB12                                                               ----------->GT1    <---------AHL20(2)                                                             --------->GLK1(2)<------ZmHOX2a(1) --------ICU4 ------->TEIL                              ----------->GT1    <---------HSFB2a(2) ------------>AGL15       --------->DAG2             ---------->DOF2       --------->HSFB2a(2) -------------AGL15      ---------->DOF2         --------->At4g35610       <---------LBD16 <---------YAB1   ctcattgttgaaaatgaaactgaaccaaaaagtaagagagaccacaaaatcagttcaaaggaaaatcggaaaaaattcgaggaataaatcatgatgatag  26208200                                                                                                    -                                                                                                    <                           <---------TOE1(2)                                                      ---                        --------->YAB1                                                           <---             --------->TOE2(3)                                                                   ----             --------->TOE1(2)                                                                 ------             --------->TOE1(3)  --------->YAB1  <---------TOE2(3)                             <------    --------->ATHB12 --------->WOX13(1)         <---------TOE1(3)     <---------TOE1(3)       -------   --------->ICU4  ------------>CBF        <---------MYB46(3)         <---------TOE2(3)     --------- <------------CBF  <------ZmHOX2a(2) <------------CBF           --------->GLK1(2)          --------->ICU4   aagaattgattaaaaccttagatcaatcgtagaatcagaaattggaggttagggtttgtgatgaagaatttgaaggttgaagtcttgaagacgatgatga  26208300                                           <---------YAB1       <---------YAB1                    --------->YAB1       --------->ICU4                    <---------ICU4     --------->YAB1                     --------->ICU4   <---------WOX13(1)                   <---------YAB1 --------->ATHB12                   --------->TOE2(3) -------->ICU4                    <---------ARR11(3) ---------YAB1                  <---------AHL20(2) ------>YAB1                   --------->AHL20(2) ------YAB1                --------->AHL20(1) ----->ICU4    --------->At4g35610--------->ARR11(3) --->YAB1      <---------LBD16 <---------AHL20(2)                --------->ZAT6 ---YAB1  <---------YAB1   <---------AHL20(2)                  <---------ARR11(3) -->ICU4--------->YAB1     --------->AHL20(2)             <---------YAB1 >YAB1<---------TOE2(3)   --------->AHL20(2)         <---------MYB46(3)                ----------->GT1   tgatgattgatgatgatagcggaagaaaaaaaattaaatcttattattatcccagtggttttgattatctctatttgtttaaaatgggctagataaaaca  26208400                                                   <---------ANAC58                                                   <---------ANAC46                                                   <---------ANAC58                                               <-----------HVH21                            ---------                                         <-----------GT1                                    ---------                                       <---------AHL20(2)     <---------YAB1     <---------ARR14(2)                                   <---------AHL20(2)      --------->ICU4        --------->ARR14(2)                                   --------->AHL20(2) <------MYB83  *TSS    ----------->GT1 <--------             ----------->GT1      --------->AHL20(2)  <------MYB46(1)       --------->YAB1  <--------          <----------DOF2         <---------AHL20(2)  ----------->GT1      <---------ATHB12--------->ALFIN1   gatgggcctgggcttttgttaaaaaaaactacggtattaatttaaacgatgtcgcttggtaattctcattcttctcaatcgtgaatttgcagagtgcaga  26208500                                                                           --------->ANAC46                                                                           --------->ANAC58                                                                           --------->ANAC58                                                                         ---------->DOF2                                                                      <-----------HVH21                                                                     --------->TGA1a                                                                     <---------TGA1a                                             <---------MYB52(1)      ============================bZIP_DOF                                            <----------DOF2          --------->bZIP60(1)                                       <---------ANAC58              ===============bZIP_DOF      <---------WOX13(1)   ---------->ID1   ===================================bZIP_DOF    --------->ATHB12     --------->MYB52(2)<---------ANAC58          <---------bZIP60(1)   <---------YAB1       <---------TOE1(2)  <---------ANAC46          ================================ >ZAT14                <---------MYB52(1)  <---------ANAC58          --------->ANAC58              <- >ZAT18             <---------ATHB12   <---------ANAC58              --------->ANAC58       --------- -ZAT14       --------->ANAC58   <---------YAB1     ===========================bZIP_DOF    <---------GLK1(2) -ZAT18       --------->ANAC58   <---------AHL20(2) ---------->DOF2 --------->SPL7    <----------DOF2   cattgttgattgaagaacgctaatcgtttgtttttttaattgtttgcgttaagttaaagctacttgttgggacgtcaaagcaacgcttctttcgattctg  26208600  Previous    Next  AGI:  At1g69670.1    Description:  ATCUL3B/CUL3B (Cullin 3B); protein binding / ubiquitin-protein ligase. similar to ATCUL3/ATCUL3A/CUL3/CUL3A (Cullin 3A), protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G26830.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81888.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48405.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72935.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Cullin homology; (InterPro:IPR016158); contains InterPro domain Cullin repeat-like (InterPro:IPR016159); contains InterPro domain Culli Range:  from: 26205694    to: 26208105    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g69680.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK93471.1); contains InterPro domain Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124); contains InterPro domain Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); contains InterPro domain Ran-interacting Mog1 protein (InterPro:IPR007681) Range:  from: 26208468    to: 26210591    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.