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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
---------->
DOF2
--------->
REM1(2)
<---------
ARR11(3)
------->
LBD16
------->
GAMYB
-------
ANAC58
----------->
RAV1(1)
--------->
GLK1(2)
-------
ANAC46
----------->
RAV1(1)
--------->
ANAC46
<---------
ARR11(3)
-------
ANAC58
<----------
ID1
-------->
P
<----------
DOF2
<---------
GLK1(2)
-
---->
SPL7
<------
ZmHOX2a(1)
--------->
MYB46(3)
<---------
DAG2
--------->
ARR11(3)
<<<<<<<<<
TBF1
c
cgtgaacaaaaggatagcgacaacagcttgaacaacctgttgaacaagaacacctttcacaacagaagatttcgatacaagattcttctcttcttcttc
26199000
<-------
----------
------>
MYB83
------>
MYB46(1)
--------->
ANAC46
--------->
MYB46(3)
<---------
ZAT14
<---------
MYB59
---------->
DOF2
--------->
ZAT14
--------->
ANAC58
<---------
ZAT18
--------->
LBD16
--------->
ANAC46
--------->
ANAC46
--------->
ZAT18
--------->
HSFB2a(2)
--------->
ANAC58
<------
ZmHOX2a(1)
<---------
HSFB2a(2)
--------->
ZAT6
-------->
TOE2(3)
---------->
DOF2
--------->
TOE2(3)
<---------
ZAT18
----------->
RAV1(1)
aacctttgaatgcaatctataactctctaaagaggagagcgctacataaatcccagaatacaaccagtacaccacaatcggagcaacagtacccaacaat
26199100
------->
GAMYB
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
GLK1(2)
--------->
ARR11(3)
<---------
ARR11(3)
--------->
AGP1
--------->
MYB46(3)
<---------
CCA1(2)
--------->
ARR14(2)
============================
HOX2a_HOX2a
--------->
ANAC58
===========================
HOX2a_HOX2a
--------->
ANAC58
------>
ZmHOX2a(1)
<---------
ARR14(2)
--------->
ANAC46
--------->
TOE2(3)
<---------
At4g35610
---------->
DOF2
<---------
ICU4
----------->
ARR10
--------->
AtMYB61
--------->
YAB1
<---------
GLK1(2)
-------->
P
<------
ZmHOX2a(1)
---------->
DOF2
<---------
YAB1
--------->
At4g35610
--------->
WOX13(1)
--------->
DAG2
--
ATHB12
<---------
ICU4
<---------
At4g35610
--------->
MYB46(3)
---------->
DOF2
->
RAV1(1)
<---------
ATHB12
<---------
ZAT2
------>
ZmHOX2a(1)
<---------
ATHB12
<---------
GLK1(2)
tcatccgatacagcaaaacccatcatcat
tcctaaatctcagcttcttcagatcctcttcatcaaccaaaacgcaaatgatgcaaaaaggatagattatt
26199200
<
<---------
LBD16
--------->
ATHB12
<------
<----------
DOF2
--------->
ICU4
<-------
GAMYB
------>
ZmHOX2a(2)
--------->
ATHB12
<---------
DEAR3(1)
--------->
ARR11(3)
--------->
ICU4
<---------
TOE1(3)
-
<------
ZmHOX2a(1)
<---------
ARR11(3)
<---------
YAB1
<---------
WOX13(1)
--------->
ALFIN1
============================
HOX2a_HOX2a
<---------
YAB1
<---------
YAB1
<---------
TOE2(3)
<-
ttcacaggaaaacttccaaagttttgatctttattcttcaattggggaaatttgattattgaaacgatgattggggattgttttagggtttgggcgttgt
26199300
<---------
ZAT14
===============================
<---------
AtMYB61
--------->
ALFIN1
==============================
bZIP_DOF
<----------
DOF2
===============================
<---------
ANAC46
<---------
O2
--------->
ZAT14
--------->
MYB52(1)
<---------
ANAC58
--------->
O2
<---------
ZAT14
<---------
ATHB12
<---------
ANAC58
<---------
ANAC58
----------->
HVH21
<---------
ANAC58
<---------
bZIP60(2)
------
---------
At4g35610
==============================================
bZIP_DOF
--------
---
MYB46(3)
---------->
DOF2
<---------
ANAC58
<---------
ANAC58
<------------
CBF
-------->
At4g35610
<----------
ID1
<---------
ARR14(2)
<---------
TGA1a
--------->
ATHB12
--------
ANAC46
---------->
DOF2
<------
ZmHOX2a(1)
*
TSS
--------->
TGA1a
--------->
ICU4
-
tgagttgacaaatcaacgatgaagaaagaaacaaaacaaaggacgatacttgcgtttt
ggtctgagagacagacgtggctgaactgtactcattgaaaag
26199400
<---------
ZAT14
--------->
ZAT14
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
CCA1(2)
<---------
AGP1
--------->
GLK1(2)
<---------
ARR11(3)
--------->
ARR14(2)
--------->
AGP1
<---------
GLK1(2)
--------->
ARR14(2)
<---------
ARR14(2)
--------->
AHL20(2)
--------->
ARR11(3)
<------
NtERF2
<----------
ID1
--------->
ZAT14
<---------
ANAC46
----------->
GT1
--------->
ALFIN1
<------
NtERF2
===
bZIP_DOF
<---------
ARR11(3)
----------->
ARR10
<---------
LBD16
===
bZIP_DOF
--------->
ARR11(3)
<-------
GAMYB
--------->
ALFIN1
<----
----->
GT1
--------->
RVE1(1)
<---------
MYB46(3)
<---------
O2
<----------
DOF2
-----
-->
DOF2
--------->
CCA1(1)
----------->
GT1
--------->
O2
--------->
ARR14(2)
<-----
--------->
DOF2
>>>>>>>>>>>>>>>>>
LFY
--------->
ANAC46
------>
ZmHOX2a(2)
--------->
ICU4
aaaaaagaaaaaaatatctaattatccagtgtggttagatctacagtgagttatctacgtggcggaatctcgatcgtatatacttttgatgtgattttta
26199500
<---------
MYB46(3)
<---------
ANAC58
<---------
YAB1
<------
MYB46(1)
<---------
ICU4
<---------
MYB46(3)
<---------
ANAC58
<------
MYB83
<---------
ANAC46
<---------
MYB52(1)
<---------
ANAC58
<---------
ANAC58
<-----------
GT1
<---------
WOX13(1)
<---------
At5g28300
<---------
ZAT6
--------->
ATHB12
-------->
P
--------->
YAB1
--------->
ANAC55(2)
<-----------
GT1
<---------
YAB1
<---------
ANAC58
--------->
TOE1(1)
--------->
ICU4
<---------
ANAC46
<
-------
GT1
--------->
TOE2(1)
<---------
ICU4
<---------
ANAC58
<
---->
MYB52(1)
--------->
GLK1(2)
--------->
ICU4
<---------
ANAC55(2)
<------
------
GT1
<---------
GLK1(2)
<---------
YAB1
<---------
DEAR3(1)
------>
ZmHOX2a(1)
<
acggttgattcgctaagaagaatctcgtacttaccgtgtttgattattattactgttagcgatggcgtgattggttgttttgttcctcgttttagtttca
26199600
--------->
WOX13(1)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
TOE2(3)
------>
NtERF2
--------->
AHL20(2)
--------->
ANAC46
<---------
AHL20(2)
--------->
DEAR3(1)
<--------
HAHB4
<---------
DEAR3(1)
<-----------
GT1
<---------
YAB1
<----------
DOF2
<----------
DOF2
<---------
ICU4
---------
ANAC58
<---------
AHL20(2)
--------->
ATHB51
---------
ANAC58
<---------
ANAC46
--------->
AHL20(2)
--------->
ICU4
-----
-
TEIL
--------->
DEAR3(2)
------->
TEIL
<---------
ICU4
<---------
YAB1
--------->
YAB1
---------
ANAC46
<------
NtERF2
----------->
HVH21
<-------
TEIL
--------->
YAB1
<---------
AHL20(2)
tgtcgtctttgaaacgacgccgtataagtttaaacatatgtgacgaatgtataaaattcatctttactagctctcataattaatgaattaatcaaaaaaa
26199700
--------->
TOE2(3)
--------->
MYB52(1)
<---------
AHL20(2)
--------->
LBD16
<---------
WOX13(1)
--------->
AHL20(2)
<---------
ARR14(2)
--------->
YAB1
--------->
HSFB2a(2)
--------->
ARR14(2)
--------->
ZAT6
<---------
HSFB2a(2)
--------->
GLK1(2)
--------->
YAB1
<---------
YAB1
--------->
GLK1(2)
---->
AHL20(2)
<-----------
GT1
<---------
YAB1
<---------
AHL20(2)
<---------
GLK1(2)
aaatcagtatccgaagttttactaccgataatactaattgaatgaaggcaatctcttatattttatgtttctataaaatagaagagattcttaaccatga
26199800
<---------
GLK1(2)
<---------
WOX13(1)
--------->
ANAC46
--------->
ATHB12
--------->
ANAC58
--------->
YAB1
--------->
ANAC58
<---------
YAB1
--------->
ICU4
<---------------
AGL15
>>>>>>>>>
--------->
YAB1
<---------
YAB1
<---------
DAG2
<-----------------
AG
<---------
YAB1
<---------
CCA1(1)
--------------->
AGL15
<------
ZmHOX2a(1)
<---------
TOE2(3)
--------->
ARR11(3)
=====================================
MADS_MADS
----------->
GT1
<---------
ARR11(3)
<-----------
GT1
<-----------------
AGL1
gagataaatggttaagaatgatagataactagatattatgagaaatttttagataaaaccttttcaagaaactcattttcgatataggaaataaaaccat
26199900
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AGI:
At1g69640.1
Description:
acid phosphatase, putative. similar to acid phosphatase, putative [Arabidopsis thaliana] (TAIR:AT1G14290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48398.1); contains InterPro domain Sterol desaturase; (InterPro:IPR006088)
Range:
from: 26197322
to: 26199358
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.