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Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                     <------ZmHOX2a(1)
                                                                   --------->LBD16
                                                                  ============================RAV
                                                                  <-----------RAV1(2)
                                                                  <---------LBD16
                                                                <------ZmHOX2a(2)
                                                                --------->CCA1(2)
                                                               --------->ARR11(3)
                                                               --------->ARR14(2)              <----
                                                               <---------ARR14(2)              -----
                               <------ZmHOX2a(2)               --------->AGP1                  <----
                              <---------ARR11(3)              --------->At4g35610              <----
                  <---------ANAC58                         <---------At4g35610    <-----------RAV1(1)
                  <---------ANAC46                    <---------ANAC58   --------->ARR11(3)    -----
--------------->AGL15         --------->ARR11(3)      <---------ANAC58   <---------ARR11(3)    <----
---------GT1      <---------ANAC58   --------->ARR11(3)  --------->REM1(1)    <----------DOF2 <-----
 
ttaccttgttgagccatctctgcgtatagattagatcatagatgttggaacaatatggcttcatcagatccaggaagatgtctttttgttgttgttcata  26193100
                                                                              --------->HSFB2a(2)
                                                                           --------->ARR11(3)
  ------>ZmHOX2a(1)             <-----------RAV1(1)                        <---------ARR11(3)
  --------->LBD16             --------->CCA1(2)      <----------DOF2    ----------->RAV1(1)
-------ARR10                --------->YAB1   <---------ANAC58          --------->ANAC46
---->ARR11(3)             <---------WOX13(1) <---------ANAC58        --------->AtMYB61
-----ARR14(2)          <---------YAB1   <---------ANAC58          --------->YAB1
-----ARR11(3)          <---------ATHB12 <---------ANAC58          <---------ICU4
---->ARR14(2)    <---------ARR11(3)    <---------At4g35610       --------->MYB46(3)     --------->HSFB2a(2)
-----ARR11(1)    --------->ARR11(3)    --------->At4g35610  ------>ZmHOX2a(1) <---------HSFB2a(2)
----CCA1(2)     <---------CCA1(2)    <--------P   <-----------GT1<---------ATHB12       <---------HSFB2a(2)
 
tcttcctgagaacaatagtatatctaatgaatgatatgtggtagcttagcgtttttctttctcctctaatcaccacaacatctggaatcacctcgaagaa  26193200
                                                                                               -----
                                                                                              <-----
                                                                                              ------
                                                                                           <--------HAHB4
                                                                                           ---------
                                                         ------->TEIL                <---------TOE2(3)
                                                     --------->HSFB2a(2)          <---------YAB1<---
                                   <-------TEIL<-----------ARR10                  <---------WOX13(1)
                          <---------TOE2(3)    --------->ARR14(2)              --------->ICU4<------
                         <-----------GT1       <---------ARR11(3)          <---------YAB1  ---------
                       <---------WOX13(1)      --------->ARR11(3)        --------->ATHB12  <--------
                --------->DAG2  <------MYB46(1)<---------ARR14(2)        <---------ICU4   --------->ICU4
               ---------->DOF2  <------MYB83  <---------CCA1(2)         --------->ICU4    --------->AHL20(2)
 
cattttgagaactagaagtaaagttgattaacatttggtacatgaacacaaatcttcttgaacgttgttgaactagtgattactgattaatgaataatta  26193300
  <----------ID1                                                                                ----
---------->DOF2                                                                                <----
----->DOF2                                                                                    <-----
----AHL20(2)                                               --------->ICU4                     ------
--->AHL20(2)                                              --------->ANAC58        <---------ANAC58
>ATHB51                   <----------DOF2                 --------->ANAC58        <---------ANAC58
------TOE2(3)            <----------DOF2--------->ICU4<---------YAB1--------->ANAC58        <-------
---YAB1   --------->TOE1(2)        --------->ANAC58   <---------ANAC55(2)         <---------ANAC46
>YAB1    <---------HSFB2a(1)       --------->ANAC58<---------YAB1   --------->ANAC58      --------->YAB1
-ICU4    --------->HSFB2a(1)       --------->bZIP60(2)--------->ANAC55(2)  --------->AHL20(2)-------
 
aagaaaagacaaacgttcgaaagatgggcctttgggccaagtcatatttggattattatgtaagcattaacaagcccataaaatgtcgtccattgatgat  26193400
                          <---------ARR14(2)
                          --------->AGP1
                          --------->ARR14(2)
                       --------->SPL7                                           <---------ANAC46
                     <---------SPL7                                             <---------ANAC58
                     <-----------HVH21                                   --------->AHL20(2)
                    --------->DEAR3(1)                                 <---------ARR11(3)
  ------------>CBF --------->MYB46(3)                                  --------->ARR11(3)
----->YAB1         --------->DEAR3(2)                                 --------->YAB1               -
-----YAB1         ------->TEIL                                     ---------->DOF2                 <
----ARR11(3) <---------At4g35610                 ----------->GT1  <---------AHL20(2)               -
--->ARR11(3) --------->At4g35610         --------->ALFIN1    ----------------->AGL3                <
--YAB1  <---------ANAC55(2)        <----------DOF2    ---------->DOF2----------->GT1 ---------->DOF2
-->YAB1 --------->ANAC55(2)<------ZmHOX2a(2)   ----------->GT1  ----------->TBP <---------ANAC58  *TSS
 
cataagtcaatatgtaatctgaaccgtccgatctagggctttaggtgttgaagtgaaaaaagaccctatataaagataatatagcttataaagtctcttc  26193500
                                                                                                ----
                                                                                                ----
                                                                                                <---
                                                                                                ----
                                                                                                ----
         <---------At4g35610                                                                    ----
         --------->At4g35610                                                                    <---
         <---------ZAT2                                                                      <------
         --------->ZAT2                                                     <-----------GT1  <------
      ---------->DOF2                                                 <---------ANAC46       -------
     --------->WRKY18(1)                                            ------>NtERF2    --------->ANAC58
     <---------MYB52(1)      --------->STY1(1)                     --------->DEAR3(1)<---------bZIP60(1)
    <-----------HVH21        <---------STY1(1)                    <---------At4g35610--------->ANAC58
-------->ZAT2    ----------->GT1                                 <---------ATERF1(1) --------->bZIP60(1)
---------At4g35610----------->GT1                              <---------ZAT14       --------->ANAC46
-------->At4g35610<------ZmHOX2a(1)                            --------->ZAT14    <------ZmHOX2a(2)
---------ZAT2  <------ZmHOX2a(1)                           <-----------RAV1(1)   <-----------HVH21 -
 
tctgctccgtcaagctgaggaggataaaaaccctagggtgagtgagacagagagaagcgaaaatggtgcagcgccttgtttaccgatcacgacacagtta  26193600
          ------>MYB46(1)
          -------->P
          ------>MYB83
     <---------ARR14(2)
     --------->ARR14(2)
    ------>MYB46(1)
    ------>MYB83
  --------->AtMYB61
  <---------MYB111(1)
------>NtERF2
----->ANAC58           ----------->GT1                                                        ------
----->ANAC58           ------>ZmHOX2a(2)                                                    <-------
------ANAC55(2)      <---------ARR11(3)                                                     --------
----->ANAC46  --------->ZAT2                                             <-----------GT1    <-------
----->ANAC55(2)      <---------ARR14(2)                         --------->At4g35610         ------->TEIL
----->bZIP60(1)      --------->ARR14(2)                       <-------MYC3          --------->ARR14(2)
------bZIP60(1)<---------ALFIN1                               <-------MYC2          ------->TEIL
---MYB52(1) ------->GAMYB                                     ------->MYC2    --------->ARR14(2)
---ARR14(2)--------->MYB46(3)            <---------ZAT14      ------->MYC3    <---------ARR14(2)
-->ARR14(2)<---------MYB55(2)      --------->LBD16           <----------TaMYB80    <---------CCA1(2)
-------->DEAR3(1)   <------ZmHOX2a(1)--------->ARR14(2)     ---------->TaMYB80--------->GLK1(2)   --
 
cgccaccaaatccaaccagcacaggatcgtcaaaactccaggtctgttctgtttcttcaatcgcatatgctgaaattcacaaatctgtatccatggatct  26193700
                                                                                                 ---
                                                  --------->MYB52(1)                             ---
                                <-----------RAV1(2)                                             <---
                          --------->ATHB12        ------->TEIL                                  ----
                         <---------YAB1         <---------SPL7                                ------
                        <---------TOE2(3)      <---------ANAC58                               <-----
                       --------->YAB1          <---------ANAC58                             --------
  --------->CCA1(2)   --------->ICU4           --------->ANAC55(2)                       <----------
>ZmHOX2a(2)      <---------ANAC58             --------------->AtSPL8                     -----------
--AGP1           <---------ANAC46             <---------TOE2(3)                 <---------MYB59<----
->ARR11(3)       <---------ANAC58             --------------->AtSPL3          ------->TEIL  <-------
--ARR11(3)       --------->ANAC55(2) ----------->GT1                        <---------ZAT18 --------
------->YAB1    <---------TOE2(3)  <------ZmHOX2a(1)                        --------->ZAT18<--------
 
ataagatttgaaatgtattgacgtattgatgatttgcaggaggtaaattgacgtaccagaccactaagaagagagctagtggacctaaatgtcccgttac  26193800
      --------->ARR14(2)
      <---------ARR14(2)
    <XXXXXXXXXXXXXXXXXXXXMIR782
------>ANAC46
------>LBD16
------ATERF1(2)
----->ATERF1(2)
--->MYB52(1)
----DOF5.7(2)
--->HVH21                                                                                        <--
-------AGL1                         --------->ARR14(2)              <----------DOF2             >>>>
------>AGL1                         <---------GLK1(2)          --------->ANAC55(2)            <-----
-----LBD16                          <---------ARR14(2)         <---------ANAC55(2)    <---------WRKY18(1)
--MYB52(1)     <-------GAMYB     --------->YAB1               <-------TEIL           --------->WRKY38(1)
->DOF5.7(2)   --------->ALFIN1  <-------TEIL             <---------TOE2(3)           ----------->HVH21
---HVH21 <---------LBD16      <---------GLK1(2)         ---------->DOF2             <---------WOX13(1)
 
cggcaagcgtattcagggtgttagtattcttcagattcatattctctccgatttgagtctaaagttacatactttgtttgattttggattgacccatttg  26193900
                                                     --------------------->WRI1
                                                   --------->MYB52(2)               <---------At4g35610
                                               <------MYB46(1)                      --------->At4g35610
                    <---------WOX13(1)         <------MYB83 xxxxxxxxxxxxxxxx>smallRNA(i)
     <---------TOE2(3)                        <---------AtMYB61                <---------MYB46(3)
     <---------TOE1(3)  --------->AtLEC2      --------->MYB59    <-----------GT1 <--------P
-------WOX13(1)   --------->ATHB12       <---------TOE1(3)  <---------YAB1  <---------At4g35610
>>>>>ARR2        <---------YAB1          --------->MYB59    xxxxxxxxxxxxxxxx>smallRNA(s)
----YAB1  --------->KAN4(2)              <---------TOE2(3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)----
 
attgttttgaggttattctattgattgatgcaaatgtagtagtttaggtttggtttgtttgtgcttattgacggtcttgtgctggttagatgaattcaac  26194000
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AGI:  At1g69610.1   
Description:  structural constituent of ribosome. similar to structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT5G39785.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48386.1); contains InterPro domain Ribosomal protein L34e; (InterPro:IPR008195); contains InterPro domain Protein of unknown function DUF1666 (InterPro:IPR012870)
Range:  from: 26190617    to: 26193152    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At1g69620.1   
Description:  RPL34 (RIBOSOMAL PROTEIN L34); structural constituent of ribosome. Identical to 60S ribosomal protein L34-2 (RPL34B) [Arabidopsis Thaliana] (GB:Q9FE65); similar to 60S ribosomal protein L34 (RPL34A) [Arabidopsis thaliana] (TAIR:AT1G26880.1); similar to 60S ribosomal protein L34 (GB:P41098); similar to unknown [Populus trichocarpa] (GB:ABK92764.1); similar to unknown [Populus trichocarpa] (GB:ABK94411.1); contains InterPro domain Ribosomal protein L34e; (InterPro:IPR008195)
Range:  from: 26193499    to: 26194986    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.