Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                 <---------ANAC58                     ------>MYB83                                                <---------ANAC58 <--                     ------>MYB46(1)                                 --------->TOE2(3)         <----- ---------MYB52(1) <---------MYB59                                   --------->TOE1(3)<---------WOX13(1)   ccattacttctacatactataccaaattcaaaatttagaactacctattttgtagactaaaactttctcaagcttaaattgtttcttgatagactaaata  26145100            --------->DAG2           ---------->DOF2 ---->AHL20(2) ---->AHL25(1) ---->AHL25(2) -----AHL20(2) -----AHL20(1) -----AHL20(3) ---->AHL20(3) ---->AHL12(1) -----AHL25(1) ---->ARR11(3) -----AHL12(1)                                  --------->AHL20(3) -----AHL25(3)                                  <---------AHL20(3) -----AHL25(2)                                  <---------AHL12(3)                       ------->MYC3 ---->AHL25(3)                                  --------->AHL25(1)                       <-------MYC3 -----ARR11(3)                                  --------->AHL20(2)                    --------->TGA1a ---->AHL20(1)                           <------NtERF2                                <---------TGA1a --->AHL12(1)                            ----------->RAV1(2)                          =============== ----AHL12(3)                           <---------ATERF1(1)    --------->ANAC46       =============== --->AHL12(3)                           ------>NtERF2          --------->ANAC58       =============== ----AHL12(1)                          <---------RAP2.6(2)     --------->ANAC58    <---------ZAT18 --->AHL20(2)                         --------->RAP2.3(1)    --------->ANAC46    --------->At4g35610 -------AHL12(2) <------MYB46(1)      --------->ATERF1(1)  --------->AtMYB61     <---------At4g35610 ----AHL25(1)    <------MYB83        <---------ATERF1(1)<-----------GT1         ------->TEIL  <------   tattatcccaaggtaaagttggtgtttatgtgtgtttgaaggcgcctgaaaaaaatagaaaccacacgactcgtcttgtatgtagctcacatgtgtcttt  26145200                                                                   <---------AHL12(2)                                                                  <---------AHL20(2)                                                                  --------->AHL12(3)                                                                  <---------AHL12(3)                                                                  <---------AHL12(1)                                                                  --------->AHL12(1)                                                                  --------->AHL12(2)                                                                  <---------AHL12(2)                                                                 --------->AHL25(1)                                                                 <---------AHL25(1)                                                                 --------->AHL20(1)                                                                 <---------AHL20(1)                                                                 <---------AHL20(2)                                                                 --------->AHL20(3)                                                                 <---------AHL20(3)                                                                 --------->AHL20(2)                                                                 --------->AHL25(2)                                                                 <---------AHL25(3)                                                                 <---------AHL25(2)                                                                 <---------AHL12(1)                                                                 <---------ARR11(3)                                                                 --------->ARR11(3)                                                                 --------->AHL12(1)                                                                 --------->AHL25(3)                                                                --------->AHL12(2)                                                                --------->AHL12(3)                                                                --------->AHL20(2)                                                                <---------AHL12(3)                                                                <---------AHL12(2)                                                                --------->AHL12(1)                                     --------->At4g35610        <---------AHL12(1)                                     <---------At4g35610       --------->AHL12(2)                              <---------ARR11(3)               <---------AHL12(2)                            <---------AHL25(3)                <---------AHL20(3)                            <---------AHL20(2)                --------->AHL12(3)                           --------->AHL20(2)                 <---------AHL12(3)                           <---------AHL25(1)                 --------->AHL20(3)              --------->ANAC58--------->ARR11(3)            --------->AHL25(2)       <----------DOF2    --------->AHL12(2)                <---------AHL20(3)       <---------DAG2   --------->AHL12(1)                  --------->AHL20(3)                  <----      <---------ANAC58  <---------AHL12(1)                  <---------AHL12(3)                  <----      <---------ANAC58<---------AHL12(2)                    --------->AHL12(3)                 ------  <----------DOF2     --------->AHL12(2)                    --------->AHL20(2)                 ------ <---------DOF5.7(1)--------->AHL20(2)   <----------DOF2   --------->AHL20(2)                  ------ =================bZIP_DOF<---------AHL12(2)            --------->YAB1<---------AHL20(2)    --------- ====bZIP_DOF --------->ANAC58--------->GATA12       ----------->RAV1(1)       --------->KAN1  ------ ============bZIP_DOF<---------AHL20(2)  <---------ARR14(2)--------->YAB1 <-----------GT1   --------- ----DOF2     --------->ANAC46<---------GATA12  --------->PCF5--------->AHL20(2)            <--------   gcctctttgctttttcatgccattaaatattaaatcttcagcggtttttggtccccaacaataaaaatatattttcttactatattctatagttcattaa  26145300                                                <---------AHL20(2)                                                <---------AHL25(1)                                                <---------AHL12(3)                                                --------->AHL25(2)                                                <---------AHL25(3)                                                <---------AHL25(2)                                               --------->AHL25(3)                                               <---------AHL25(3)                                               <---------AHL25(2)                                               --------->AHL25(1)                                               --------->AHL20(1) -----TOE2(3)                                  <---------AHL20(2) -----YAB1                                     --------->AHL20(2) --->YAB1               --------->AHL20(2)     <---------AHL20(1)                            -------- --->AHL12(3)           <---------AHL20(2)     --------->AHL12(3)                            -------- --->AHL20(2)   ------>MYB46(1)                <---------AHL12(3)                           --------- >WOX13(2)      ------>MYB83           ----------->GT1                                      --------- --->AHL20(3) <---------MYB59       ------------------------>ANAC81                    ----------->GT1 >TOE2(3)<---------KAN1--------->AHL12(2)      <---------AHL25(1)               ---------->DOF2 ----- -WOX13(2) <-----------GT1    <---------YAB1   --------->AHL25(2) <---------AtMYB61  ---------->DOF2   tattacattgaataaacctaatgttttttaatatgaaaaaccagaaaaataaaattgcattcggagttttggtcttgttttgaaaagaaaagaaaaaagt  26145400                                                                   <---------WOX13(2)                                                                   <------------CBF            ------                          ----------->GT1 --------->WOX13(1)       --------->WOX13(2)         <------                    <<<<<<<<<<<<<<<<<LFY --------->YAB5          --------->AHL20(2)        <---------DOF5.7(1) ->DAG2           --------->AHL20(2)    <---------ATHB12      --------------->AGL15       <---------DOF5.7(1) ->DOF5.7(1)    --------->TOE1(3)       <---------YAB5        <---------HSFB2a(2)         <----------DOF2 ->DOF2         --------->TOE2(3)  --------->TOE2(3)          --------->HSFB2a(2)         <---------DAG2 >DOF5.7(1)   <---------YAB1      ----------->GT1--------->YAB5 ----------->TBP  <---------ALFIN1  *TSS ---->ALFIN1  <---------TOE2(3)   <---------ANAC55(2)         <---------------AGL15  ------>ZmHOX2a(1)   ggaagctagttgcattaacattaaacagtggcaaaaacgtaaatcattcactcactaagtttttctataaattgaactactcccctcctctgctttttcc  26145500                            --------->YAB1                            <---------ICU4                           <---------YAB5                         <---------ICU4                         --------->YAB1                                             --------->YAB1                      --------->YAB1                                          --------->ANAC58                  --------->GLK1(2)                --------->ANAC46       ------>MYB83                 <---------RVE1(2)            <---------DOF5.7(1)         ------>MYB46(1)                 <---------GATA12            ------>ZmHOX2a(1)         --------->HSFB2a(1)                 <---------GLK1(2)           ============================HOX2a_HOX2a<--------HAHB4                 <---------ARR14(2)        <-----------------AGL1 <------ZmHOX2a(2) <---------ICU4                 --------->ARR11(2)       <-----------GT1        <---------ARR11(3)<---------ATHB12                 --------->ARR14(2)       ---------->ID1         --------->RVE1(2) <---------YAB1                --------->KAN1           <-----------GT1         --------->ARR11(3)<---------YAB5            --------->MYB52(1)<---------CCA1(2)<----------DOF2 --------->DOF5.7(1) --------->ICU4         ------>MYB83<---------YAB1  <----------DOF2  ---------->DOF2  <---------HSFB2a(1) <--------- ------>CBF ----------->RAV1(1)     <---------DOF5.7(1) --------->DOF5.7(1)   --------->ANAC46 -----GT1------>MYB46(1)--------->ICU4<---------DOF5.7(1)    ---------->DOF2  --------->ANAC58   aattctaaaccaaacaacagattctcataatcatctcttcttttttcctctttacgaaaagaagaaagatcaaaccttccaagtaatcattttctttctc  26145600                                                                                       --------->DOF5.7(1)                                                                                     --------->DOF5.7(1)                                                                                     ---------->DOF2                                                    --------->WOX13(2)          ----------->GT1                                            <---------MYB59                --------->ANAC46                      <---------ZAT6        ------>ZmHOX2a(2)            <---------------AGL15            --------->KAN1                <---------GATA12  --------->ARR11(2)  <----------ID1 -DOF2    <---------ALFIN1                --------->GATA12  --------->ARR14(2)---------->DOF2   tctctcacacacacacattcactagttttagcttcacaaaatgtgatctaacttcatttacctatatgcaggtttacacaaaaagaaaaaagaacgatgg  26145700                                               <-----------HVH21                                            --------->ANAC55(2)                                            =================================MYC_MYB                                            --------->O2                                            <---------ANAC55(2)                                            <---------O2                                            ===================================MYC_MYB                                            <---------TGA1a                                         ----------->HVH21                           --------->ANAC58                                        <-----------HVH21                            --------->ANAC55(1)                                        <-----------TGA1                             --------->O2                                       --------->ANAC46                         <---------ZAT18                                       <---------ANAC58                         ===============MYC_MYB                                       <---------bZIP60(1)                     --------->ANAC58                                       <---------ANAC55(2)                  <---------WRKY45                                       <---------TGA2(1)                    <---------WRKY38(1)                                       --------->bZIP60(2)                <-----------HVH21                                       <---------bZIP60(2)              --------->MYB59                                       --------->TGA2(1)                <------MYB83 --------->ANAC58                                       <---------TGA1a                  <------MYB46(1)                                       --------->ANAC55(2)            =========================MYC_MYB                                       --------->O2                   --------->ALFIN1                                       <---------O2                   <--------P------->GAMYB                                       --------->TGA1a               <-------GAMYB <---------ALFIN1                                       --------->bZIP60(1)           ==========================MYC_MYB                                       ======================================MYC_MYB --------->TGA1a                                       <---------ANAC58           <------ZmHOX2a(1)--------->KAN1                                       ========================================MYC_MYB                                       <<<<<<<<<<HY5           <------NtERF2<---------WRKY12        -                                      <-----------STF1 --------->ARR14(2)<------MYB46(1)<---------ALFIN1                                      ----------->STF1 --------->ARR11(2)<---------ANAC46           <                                     <---------TGA2(2) <---------ARR11(2)<------MYB83--------->bZIP60(2)                                    ----------->TGA1 --------->YAB5<---------AtMYB61 --------->ANAC46                       ===============================MYC_MYB --------->LBD16  --------->ANAC58     <       <---------DOF5.7(1)          ----------->HVH21<---------MYB46(3) <---------MYB46(3)--------->KAN1    <-----------GT1    -------->P   <---------ATHB12<---------ATHB12<---------MYB46(3)  ----------->RAV1(1)  <-----------HVH21    ==========================MYC_MYB    <---------LBD16--------->WRKY18(1)  <----   ctcttgtcaccttcttgtttattgctacccttggagcaatgacgtcacatgtcaatggttacgccggaggaggttgggtcaacgcacacgccacattcta  26145800                ------>NtERF2               --------->ANAC46               --------->ATERF1(2)               <---------ATERF1(2)               --------->HSFB2a(2)               <---------HSFB2a(2)              <---------LBD16           <---------ANAC58         <---------YAB1    <---------MYB46(3)   --------->ALFIN1                                                                         ---------   <---------ANAC46                                                                   --------->TOE2(3)   <---------AtMYB61                     <---------HSFC1(2)                         ---------->ID1 <---------MYB46(3)                      --------->HSFB2a(1)                        <-----------GT1 --------->MYB55(2)                      --------->HSFC1(2)        ---------->DOF2 <-----------GT1 -------->ALFIN1--------->LBD16    <---------ANAC58             <----------DOF2--------->ARR11(3) ---------DEAR3(1)                 <---------ANAC58  --------->ANAC58          <---------ARR11(3) ---------AtMYB61        ----------->GT1------->TEIL --------->ANAC46          <---------GLK1(2) -----LBD16<---------ANAC58  <---------KAN1          --------->ANAC58   <----------DOF2<----------DOF2   cggtggtggtgatgcttccggcacaatgggtatatttccttgaaccttctctcacaagtcacaaggctttaaagctttcaagatttttcctttaccacaa  26145900                                                                                <----------CDC5                                                                             --------->RAP2.3(1)                                                                             <------NtERF2                                                                             --------->ATERF1(1)                                                                            <---------RRTF1(1)                                                                            <---------RAP2.6(1)                                                                            ------>NtERF2                                                                            <---------ATERF1(1)                                                                            <---------ORA47(2)                                                                            <---------DEAR4(2)                                     --------->ANAC58                       <---------RAP2.3(1)                                     --------->ANAC58                       <---------ERF1                                     --------->ANAC55(2)                   <---------RAP2.3(2)                                    <---------LBD16                        <---------DEAR3(1)                                   --------->CCA1(2)                       --------->DEAR3(1)                                  --------->ARR14(2)                       <---------RAP2.3(3)                                  --------->ARR11(1)                       <---------RRTF1(2)                                  <---------ARR14(2)                       <---------RRTF1(3)                                  --------->ARR11(2)                      <---------ABI4(1)                                  <---------ARR11(2)                     <---------ATERF1(1)                           <---------ANAC46                             --------->ANAC46                           <---------ANAC58                           <---------ALFIN1                          <-------TEIL                               ------>MYB46(1)                         --------->ALFIN1--------->GLK1(1)           -------->P------>NtERF2                      --------->ALFIN1  --------->ARR11(2)           ------>MYB83                   -                     <------ZmHOX2a(1)  <---------ARR11(2)         --------->AtMYB61   --------->ANAC46                  <-----------RAV1(2)<---------ANAC55(2)          --------->DEAR3(2)   --------->ANAC58              <---------ANAC58    <---------RVE1(2)               --------->MYB46(3)   --------->ANAC58              <-------GAMYB<---------ANAC58 --------->TOE2(3)   <---------ARR11(2) --------->ANAC58 < >TOE2(3)     <---------ANAC58 <---------ANAC46                 --------->ARR11(2) --------->ANAC58 <   ttcttatgaaattttgggttgcaggaggtgcttgtggatacggaaacctatatagccaaggctatggaaccaacacggcggcgctaagcacggctctatt  26146000  Previous    Next  AGI:  At1g69530.1    Description:  ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1). Identical to Expansin-A1 precursor (EXPA1) [Arabidopsis Thaliana] (GB:Q9C554;GB:Q38863); similar to ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A10) [Arabidopsis thaliana] (TAIR:AT1G26770.1); similar to ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A10) [Arabidopsis thaliana] (TAIR:AT1G26770.2); similar to alpha-expansin 3 [Populus tremula x Populus tremuloides] (GB:AAR09170.1); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Range:  from: 26145499    to: 26147159    Orientation: Forward Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.