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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
YAB1
<---------
ICU4
--------->
YAB1
-------->
ATHB1
--------->
ICU4
--------->
AHL20(2)
<---------
AHL20(2)
-
<-----------
HVH21
<-
----------->
GT1
<----------
DOF2
--------
--------->
ZAT2
<---------
AHL20(2)
------------------------>
ANAC81
----
--------->
At4g35610
<---------
DAG2
<---------
YAB1
--------
<---------
At4g35610
<-----------
GT1
<---------
YAB1
<-------
----->
YAB1
<---------
ATHB51
<---------
CCA1(2)
---------
tatgagctgtcaaattattattttgactttatgagttgtcatattatacatagcatatcattcttaagaaaaacaaaaacaaaaacaaaaacaaaaaaat
25661300
<---------
YAB1
--------->
AHL20(1)
<---------
ICU4
--------->
ATHB51
<--------
HAHB4
--------->
AHL20(2)
--------->
ARR14(1)
------>
MYB83
--------->
ARR14(2)
------>
MYB46(1)
<---------
ARR14(2)
--------->
MYB46(3)
----------->
GT1
--------->
YAB1
--------->
AtMYB61
------>
NtERF2
<------------
ATHB5
<---------
ATHB12
--------->
MYB46(3)
--------->
ANAC58
<--------
ATHB1
<---------
YAB1
<---------
MYB55(2)
--------->
ANAC58
<---------
ICU4
--------->
TOE2(3)
--------->
MYB46(3)
--------->
ANAC46
--------->
YAB1
-------->
YAB1
<-----------
GT1
<---------
AHL20(2)
--------->
ATHB51
--------
YAB1
--------->
DAG2
--------->
YAB1
-------->
ATHB1
->
AHL20(2)
---------->
DOF2
-------->
ATHB1
--------->
ICU4
-----------
----->
YAB1
<---------------
AGL15
--------->
ICU4
<---------
ATHB51
-
->
AHL20(1)
--------------->
AGL15
<---------
ATHB51
<---------
ATHB12
--
--
AHL20(2)
--------->
At4g35610
----------->
RAV1(1)
--------->
TOE2(3)
<----------
ID1
>
AHL20(2)
------>
ZmHOX2a(2)
------->
GAMYB
<---------
AHL20(2)
--------->
TOE1(3)
---------->
DOF2
tatcatcaatgatccgcttcataaagtaaccaccaacacaattattttggacgcctcaaatccaaaccttattttcaataattgtgaaaaaaaagaaaaa
25661400
<---------
MYB46(3)
--------->
MYB55(2)
<---------------
AtSPL8
--------->
ALFIN1
<---------
ICU4
<------
MYB83
--------->
ANAC58
--------->
YAB1
<------
MYB46(1)
<---------
YAB1
--------->
MYB111(2)
--------->
YAB1
--------->
MYB111(1)
--------->
AHL20(2)
<---------
MYB46(3)
--------->
AHL20(1)
<---------
AHL20(2)
<---------
AtMYB61
--------->
ARR11(3)
--------->
ANAC46
<---------
AHL20(2)
--------->
MYB55(2)
<---------
AHL20(1)
--------->
ANAC58
<---------
AHL20(2)
--------->
MYB46(2)
<---------
ARR11(3)
--------->
ANAC58
--------->
AHL20(2)
>
GT1
<---------
TOE2(3)
--------->
ANAC58
<---------
YAB1
<---------
AHL20(2)
-------->
DAG2
<--------
P
--------->
MYB46(3)
--------->
YAB1
--------->
AHL20(2)
-------->
DOF2
<---------
MYB55(1)
--------->
YAB1
------->
GAMYB
<---------
YAB1
aaaaagctatattgtggtaggtggttcgaaccactcaaaaatatttatgataataacacccaaaaacaaactaaactattatttatttattgtggtcatg
25661500
<-----------
RAV1(1)
--------->
ALFIN1
--------->
ANAC55(2)
<---------
ANAC46
<---------
ANAC58
--------->
ZAT2
<---------
TOE1(2)
<---------
ZAT2
<-----------
GT1
<---------
At4g35610
------>
ZmHOX2a(1)
<---------
ANAC58
--------->
At4g35610
<----------
DOF2
<----------
DOF2
---------->
DOF2
<---------
CCA1(2)
<---------
DAG2
---------
<-----------
HVH21
------->
TEIL
--------->
ARR14(2)
------>
ZmHOX2a(1)
<---------
At4g35610
<---------
CCA1(2)
<---------
ARR14(2)
--------->
TOE2(2)
agatagttacagacacagagaatacatctgtcagaaagctgactcattgtatcttatctttcccatttcctcttaccttttttcctacgtgttgccacaa
25661600
<-------
MYC3
------->
MYC4
<-------
PIF5
------->
MYC2
<-------
MYC2
------->
PIF5
--------->
O2
<---------
ANAC55(2)
<---------
ANAC46
<--------
ABF1
--------->
TGA1a
========================================
bZIP_DOF
------>
NtERF2
<------------
OsbHLH66
------>
NtERF2
<-----------
HVH21
--------->
LBD16
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
<---------
ATHB12
------------>
CBF
--------->
ANAC46
<---------
ZAT18
--------->
ANAC58
--------->
ANAC58
--------->
ZAT18
<---------
TOE1(3)
--------->
ANAC58
--------->
ZAT14
<----------
DOF2
--------->
ANAC58
------>
MYB46(1)
<---------
O2
<------
MYB46(1)
<---------
ALFIN1
------>
MYB83
<---------
ALFIN1
<------
MYB83
<---------
ANAC58
<---------
ALFIN1
<---------
TGA1a
--------->
MYB59
--------->
HSFB2a(2)
<---------
MYB55(2)
------->
MYC3
--------->
ZAT14
<---------
ANAC58
<---------
ICU4
<---------
LBD16
<---------
MYB52(1)
<---------
HSFB2a(2)
*
TSS
<
-->
RAV1(1)
--------->
MYB46(3)
<-------
MYC4
<-----------
HVH21
<---------
TOE2(3)
<---------
CCA1(2)
aactctcatcttcacccactcaatctccgccacgtgtactctctaacccttcagttcggtctttttaaggcttccccaagccttcgcatccaaat
ctctc
25661700
<---------
WOX13(1)
--------->
MYB52(1)
--------->
ICU4
<---------
MYB46(3)
<---------
ZAT14
--------->
ARR14(2)
------>
MYB46(1)
<---------
At4g35610
<---------
MYB52(1)
<----------
DOF2
<----------
ID1
------>
MYB83
--------->
At4g35610
--------->
LBD16
<-----------
GT1
------------------------>
ANAC81
<-----------
GT1
--------->
GLK1(2)
<---------
YAB1
<-----------
GT1
<----------
ID1
<---------
MYB59
<----------
DOF2
<---------
ARR14(2)
----------
DOF2
--------->
YAB1
--------->
TOE2(3)
--------->
ZAT14
<---------
SPL7
ttctttttttctctctttctcataacaacaaaaaaacaaaaaaaaaacctaattagttttttctttctgcagagatt
atggaggtaccggtgattaatag
25661800
--------->
HSFB2a(2)
<---------
HSFB2a(2)
--------->
ANAC46
--------->
ANAC55(2)
<---------
LBD16
----------------->
AGL2
<-----------------
AG
----------------->
AGL1
<---------
MYB52(1)
<-----------------
AGL1
<---------
TOE1(2)
--------->
ARR14(2)
========================
HOX2a_HOX2a
--------->
ANAC58
------>
ZmHOX2a(1)
<-----------
RAV1(1)
--------->
ANAC58
------>
ZmHOX2a(2)
------>
ZmHOX2a(2)
---------->
DOF2
--------->
ARR11(3)
<---------
ARR14(2)
--------->
ARR14(2)
----------->
GT1
<---------
ARR11(3)
--------->
ARR14(2)
<---------
GLK1(2)
<----
<------
MYB46(1)
--------->
YAB1
<---------
AGP1
<-----------------
AGL2
------>
MYB46(1)
<------
MYB83
-------->
HAHB4
--------->
HSFB2a(2)
<---------
ARR14(2)
------>
MYB83
--------->
GLK1(1)
<---------
TOE2(3)
<---------
HSFB2a(2)
--------->
LBD16
--------->
ANAC46
--------->
ARR11(3)
--------->
YAB1
<----------
DOF2
<---------
ARR14(2)
--------->
REM1(1)
aataagagatttcgaagttggtataaactcgattaatgatccttcgtttctttctcgatctgttgctgtttccggaatcggaaagctacaccaagcttat
25661900
>>>>>>>>>>
GT-3b
----------->
GT1
<---------
TOE2(3)
----------->
GT1
--------->
GLK1(1)
--------->
ZAT14
<------
MYB83
<---------
ICU4
<----------
DOF2
--------->
MYB59
<---------
YAB1
------>
MYB46(1)
------->
GAMYB
<------
MYB46(1)
<---------
YAB1
------>
MYB83
--------->
ANAC46
<---------
MYB52(1)
-----
TOE1(3)
<----------
DOF2
<-----------
GT1
<---------
ZAT18
<---------
MYB46(3)
ggtttttggaaatggggagctttgattatcgcatttctagcttatttcaccaactttgttagtaaactcaacagtctagttgttaggttaagaaaaatag
25662000
<---------
ANAC46
<---------
ANAC58
----------->
HVH21
<---------
YAB1
<---------
ANAC58
----------->
TGA1
<---------
ICU4
--------->
HSFC1(2)
--------->
At4g35610
--------->
ATHB12
<---------
HSFC1(2)
<---------
At4g35610
<---------
YAB1
--------->
GLK1(2)
------>
ZmHOX2a(1)
<----------
DOF2
<---------
ARR14(2)
--------->
ARR14(2)
<----------
ID1
------>
ZmHOX2a(1)
--------->
ICU4
--------->
ARR14(2)
------>
ZmHOX2a(1)
---------->
DOF2
atgtctctgtttcctctccaactctttttgatgattacgatagcgattccgatgtttcttgttcctctaccgtctcctctgacgatgaaaaagacgaaga
25662100
<------
ZmHOX2a(2)
--------->
LBD16
<---------
LBD16
--------->
ARR14(2)
--------->
GLK1(1)
<---------
YAB1
<---------
GLK1(1)
--------->
ICU4
--------->
HSFC1(2)
<---------
YAB1
<---------
HSFC1(2)
------>
ZmHOX2a(2)
<---------
TOE2(2)
--------->
ARR14(2)
--------->
At4g35610
--------->
ARR11(3)
-
------>
ZmHOX2a(2)
<---------
At4g35610
<---------
AGP1
--------
--------->
ARR11(3)
--------->
MYB52(1)
--------->
GLK1(2)
<-
<------
ZmHOX2a(1)
<---------
AHL20(2)
------->
GAMYB
<---------
ARR14(2)
----
=====================
HOX2a_HOX2a
<---------
DOF5.7(2)
<---------
ARR11(3)
<----
<---------
TOE2(3)
<----------
DOF2
<---------
WRKY12
<-----------
ARR10
-----
<---------
YAB1
<---------
ARR11(3)
<---------
WRKY45
<-----------
HVH21
<---------
YAB1
--------->
ICU4
--------->
ARR11(3)
<---------
WRKY38(1)
<------
ZmHOX2a(1)
-------
<---------
At4g35610
--------->
WRKY38(1)
<-----------
HVH21
<----------
DOF2
<---------
ICU4
--
agatgaggctgatgatgaagatgaggatgttgactcgatctttaatcgaagacgagtcaacggaggtttccgcgttagaggatctgattattacgatgat
25662200
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AGI:
At1g68440.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G25400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42150.1)
Range:
from: 25661696
to: 25662936
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.