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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
---
<--
---
---------->
DOF2
<---------
YAB1
<-----------
GT1
--------->
GLK1(2)
<--
--------->
YAB1
--------->
ARR11(3)
<---------
ICU4
<---------
WRKY38(1)
-----
CCA1(2)
<-----------
HVH21
---------->
DOF2
----------->
RAV1(1)
<---------
WRKY12
atcttcataatatgactgtcaaagtttgtaatcagatagaccaaagaaattgtttatctacataatccaacattgcataatctaatagagtcaaaggaag
25420200
---------->
DOF2
<---------
TOE2(3)
<---------
ATHB12
<---------
ZAT14
--------->
ANAC58
<-----------
RAV1(1)
------>
ZAT18
--------->
ZAT14
--------->
ANAC46
--------->
GLK1(2)
-------
ZAT18
--------->
YAB1
--------->
ANAC58
<---------
ARR14(2)
------>
ZAT14
--------->
ANAC58
---------->
DOF2
<---------
GLK1(2)
-------
ZAT14
--------->
ANAC58
<---------
ZAT14
--------->
ARR14(2)
tgctctaatcaaggtaaagcttgaagctaggcaataagaacattgcagagagtgaagaacacaaaagccactaaacaaaatccagattctatgtcgctct
25420300
--------->
CCA1(2)
<---------
ARR14(2)
==================
HOX2a_HOX2a
<---------
ICU4
<------
ZmHOX2a(2)
--------->
ICU4
<------
ZmHOX2a(1)
--------->
AHL20(2)
---------->
DOF2
<---------
HSFB2a(2)
--------->
ARR14(2)
------->
TEIL
--------->
ATHB12
--------->
ICU4
<---------
TOE2(3)
<------
<---------
MYB52(2)
--------->
TOE2(3)
--------->
MYB59
<------
ZmHOX2a(1)
<---------
GLK1(2)
accatcaaattagcatatgagaaacgaaccaaaaagaatgatttcttaaaatcgagaaattaggatcaattctgaggatacaaattatacaaaattctcg
25420400
--------->
WOX13(1)
<---------
O2
--------->
O2
--------->
bZIP60(1)
----------->
HVH21
<---------
ARR14(2)
--------->
ARR14(2)
>>>>>>>>>>
MYB80
<--------
<------
ZmHOX2a(1)
--------->
ANAC58
<---------
ZAT2
<---------
TOE1(2)
--------->
ANAC58
<---------
At4g35610
<---------
TOE2(2)
----------->
HVH21
--------->
ANAC46
--------->
At4g35610
--------->
TOE2(2)
--------->
ARR14(2)
--------->
AtLEC2
--------->
ZAT2
--------->
TOE1(2)
<---------
ARR14(2)
<---------
GLK1(1)
---------->
DOF2
---
HSFB2a(2)
<---------
bZIP60(1)
--------->
GLK1(1)
--------->
AtMYB61
<-----------
HVH21
ataacctaggatttgacgtcaatcccaaatccagtgacacattaactcgaaatccatgcaattcaaaccaaaaccaagactaagaaagtgtcagctttca
25420500
------
-------
--------
-----------
<------
NtERF2
<---------
WOX13(1)
<---------
STY1(1)
<---------
ANAC58
--------->
ANAC46
<---------
HSFB2a(1)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
--------->
ZAT6
--------->
HSFB2a(1)
<----------
DOF2
-----------
<-----------
GT1
<------
ZmHOX2a(1)
<------
ZmHOX2a(2)
<---------
AtLEC2
-
--
DOF2
--------->
STY1(1)
--------->
GLK1(2)
--------->
ICU4
------->
TEIL
<---------
ANAC58
gtatttcacactagggcagagagaggaagagagaatcgaaac
cttctcgtcttgatgaagagcgatccagacatgaactttgtccatggattgccaaaag
25420600
------>
NtERF2
--------->
RAP2.6(2)
--------->
At4g35610
<---------
At4g35610
--------->
ARR11(3)
--->
DAG2
<---------
REM1(1)
<---------
ARR11(3)
--->
DOF2
<-----------
RAV1(1)
--------->
At4g35610
-->
DOF2
<---------
YAB1
<---------
At4g35610
--
------>
AGL1
--------->
REM1(1)
<---------
MYB52(1)
<------
NtERF2
------>
AG
<-----------
HVH21
--------->
TOE2(3)
<-----------
TGA1
<<<<<<<<<
TBF1
<-
--------->
DOF2
---------->
DOF2
--------->
TOE1(3)
<-----------
HVH21
<---------
DEAR3(1)
gcgaaagcggccaatgtcatcccaaagtaagtcaaaaccttcaccat
tgttgttgtagttttcgtcagctaaatcttcttcttctcgtcgtcgtttctca
25420700
<---------
ARR14(2)
--------->
ARR14(2)
---------->
DOF2
--------->
LBD16
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
ARR14(2)
--------->
GLK1(2)
--------->
TOE1(2)
<---------
AGP1
--------->
ARR11(3)
<---------
LBD16
<---------
HSFB2a(1)
------>
ZmHOX2a(2)
--------->
HSFB2a(1)
===========================
HOX2a_HOX2a
<---------
ARR14(2)
<---------
ALFIN1
<------
ZmHOX2a(2)
--------->
HSFC1(2)
<-----------
GT1
============================
HOX2a_HOX2a
<------
ZmHOX2a(1)
<-------
TEIL
<---------
ARR14(2)
<------------
CBF
<---------
LBD16
=================
HOX2a_HOX2a
============================
HOX2a_HOX2a
<---------
DAG2
==================
HOX2a_HOX2a
===========================
HOX2a_HOX2a
--------->
ANAC46
<------
ZmHOX2a(1)
---------->
DOF2
--------->
ATHB12
--------->
ZAT18
--------
------->
ZAT14
--------->
ARR14(2)
<------
ZmHOX2a(1)
<---------
HSFC1(2)
--------->
CCA1(2)
<---
--------
ZAT14
--------->
ATERF1(1)
<---------
LBD16
<---------
LBD16
<---------
ZAT18
<--------
gaacagagagagagaggagtcgcagatcgcgcgatgaagccctggaggatgtgttattggggaaggatctagtgcggaaagatacaccttactaccgtag
25420800
<---------
WRKY18(1)
--------->
WRKY38(1)
--------->
WRKY12
--------->
WRKY45
---------->
ID1
<-----------
HVH21
<-------
MYC4
<-------
MYC3
------->
MYC3
<-------
MYC2
------->
MYC2
--------->
O2
<<<<<<<<<<
ABI5
<<<<<<<<<<
HY5
<<<<<<<<<<
AtMYC2
<--------
ABF1
--------->
ANAC55(2)
--------->
bZIP60(2)
<---------
TGA1a
--------->
TGA1a
<---------
ARR11(3)
===================
bZIP_DOF
------>
ZmHOX2a(1)
<---------
ANAC58
------->
PIF5
--------->
CCA1(1)
--------->
LBD16
<---------
ANAC46
<-------
PIF5
<---------
GLK1(1)
<---------
ANAC46
<---------
ANAC58
------->
MYC4
--------->
RVE1(1)
<---------
HSFB2a(2)
<------------
CBF
<---------
O2
--------->
GLK1(1)
--------->
HSFB2a(2)
->
LBD16
<---------
ANAC55(2)
<---------
ARR11(3)
--------->
ARR14(2)
---------
CBF
----------->
TBP
<----------
DOF2
--------->
ARR11(3)
<---------
LBD16
-
ANAC46
----------->
GT1
--------->
ALFIN1
--------->
ARR11(3)
<---------
ARR14(2)
attggattgtcttgtataaatgccacgtgtcgctttgaccatatagatatctcttcctctacggttccggataaatgaaatttcatattttggagtcgga
25420900
--------->
AHL20(2)
----------->
GT1
------->
TEIL
<---------
AHL20(2)
<-----------
ARR10
--------->
GLK1(2)
<-----------
GT1
<-----------
TBP
<---------
WOX13(1)
--------->
AHL20(1)
<---------
MYB52(1)
<----------
DOF2
<----------
DOF2
<------------
CBF
--------->
AHL20(2)
<---------
MYB46(3)
<---------
DAG2
<---------
DAG2
<---------
YAB1
<---------
AHL20(2)
<---------
At4g35610
------->
TEIL
<-----------
GT1
<---------
ARR11(1)
----------->
GT1
<---------
MYB52(1)
<----
<---------
ZAT6
<-----------
GT1
<---------
ARR14(1)
--------------->
AtSPL8
<---------
AGP1
ttagtcttacgaactttttttttttctactttttatatcgaatctaattggtaattaaaaactgtacaaattttttaactgttaactagagctgttagct
25421000
<---------
ARR14(2)
<------
ZmHOX2a(1)
--------->
ARR14(2)
<---------
ARR11(3)
<---------
ARR14(2)
<--
--------->
ARR11(3)
--------->
KAN4(1)
<---
<---------
AHL20(1)
--------->
GLK1(1)
<----
--------->
AHL20(1)
<---------
KAN4(2)
<---------
ICU4
<---------
AHL20(2)
--------->
ANAC58
--------->
ARR11(3)
----------->
GT1
--------->
AHL20(2)
--------->
ANAC58
<---------
ARR11(3)
<------
ZmHOX2a(1)
---------->
DOF2
<---------
AHL20(1)
<---------
ATHB12
--------->
GLK1(2)
------
DOF2
--------->
MYB52(1)
--------->
AHL20(1)
----------->
GT1
---------->
TaMYB80
<----
ttataggaatagagcaaactgttataaagaattatacaataaaatatatcacagaggattgtgaaatcaagcctggaatatccaaaaatctaacaattgc
25421100
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AGI:
At1g67785.1
Description:
similar to Os01g0908400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045143.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42476.1)
Range:
from: 25419732
to: 25420647
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.