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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)
                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                            ------>MYB83  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                                          <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                          --------->AtMYB61
                                          xxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                          <---------ALFIN1<xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                         --------->MYB46(3)
                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                         xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                         <xxxxxxxxxxxxxxxxsmallRNA(si3)
                                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                                       <---------PCF5     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                      <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                      <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                   <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                   <xxxxxxxxxxxxxxxxsmallRNA(i)                 xxxxxxxxxxxxxxxxxxxx
                                   xxxxxxxxxxxxxxxx>smallRNA(i)                 --------->ATHB12
                                  <---------MYB46(3)      xxxxxxxxxxxxxxxx>smallRNA(i)
                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)           <---------YAB1
                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)           xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           ------>ZmHOX2a(2)
                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)            <---------GLK1(1)
                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)              --------->GLK1(1)
                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)             <------ZmHOX2a(2)
                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           --------->ARR14(2)     <
                            <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)               <---------ARR14(2)    <x
                            xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)           <-----------ARR10    <xx
                           xxxxxxxxxxxxxxxx>smallRNA(i)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <xx
                           <xxxxxxxxxxxxxxxxsmallRNA(i)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<------
                          xxxxxxxxxxxxxxxx>smallRNA(i)------>ZmHOX2a(1)     <---------AGP1  --------
                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
                         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)        xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                         xxxxxxxxxxxxxxxx>smallRNA(i) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <-------
                         xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                        --------->ZAT2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------CCA1(2)<-------
                        xxxxxxxxxxxxxxxx>smallRNA(i)  ===============================HOX2a_HOX2a<xxx
                        <---------ZAT2xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                     xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<xxxxxxxxxxxxxx
                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<xxxxxxxx
                   --------->DAG2 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <xxxxxxxxxxxxxxxxxsmallRNA(fl3)
                  ---------->DOF2 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <---------LBD16  <---------AtMYB61
           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  xxxxxxxxxxxxxxxx
        --------->ANAC58xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)      xxxxxxxxxxxxxxxx>smallRNA(i)  <xxx
        --------->ANAC58<---------At4g35610 ------>MYB46(1)xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxx
        --------->ANAC46--------->At4g35610<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxsmallRNA(si3)
 <xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
--->MYB52(1)   --------->AHL20(2) <-----------RAV1(1) ==============================HOX2a_HOX2a <xxx
->DOF2 <---------------------WRI1 xxxxxxxxxxxxxxxx>smallRNA(i)   <---------ALFIN1 <xxxxxxxxxxxxxxxxx
 
cggagaagaagacgcaaaataaaaagcagctgtctatttgttggaccaccctatttcctcacatcgttccacttcttcggatctcattggttttggtggt  25353100
                             <------MYB46(1)
                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
     ------>MYB46(1)         <---------HSFC1(2)
     ------>MYB83            --------->HSFC1(2)
   --------->MYB46(3)        <---------HSFB2a(1)
   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
   --------->AtMYB61   <xxxxxxxxxxxxxxxxsmallRNA(i)                 <------MYB83 --------->ANAC58
   <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                               <---------MYB46(3)
   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                            <------MYB46(1)
  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                             <xxxxxxxxxxxxxxxxxxsmallRNA(si3)
  <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                            <---------MYB46(3)
  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                         <-----------RAV1(1)
 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                          xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
 <xxxxxxxxxxxxxxxxsmallRNA(i)--------->HSFB2a(1)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
<xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                      --------->YAB1   --------->bZIP60(1)
--------->REM1(1)     ---------->DOF2                  --------->ICU4  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                  xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
<xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
xxx>smallRNA(i2)   ------>MYB83                <xxxxxxxxxxxxxxxxsmallRNA(i)      <xxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     <-----------
xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   --------->ANAC58
xxxxxxxxxxxxxxxxxxxsmallRNA(si3)           xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <xxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         <---------ANAC58 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
---MYB46(3)      ------->GAMYB            <---------ANAC58 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
->ALFIN1         <---------MYB59     <------MYB46(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<xxxxxxxxxx
--AtMYB61     <-----------GT1<------MYB83xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <xxxxxxxxxxxxxxxxxxxx
--DEAR3(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)------------>CBF
xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<---------MYB46(3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) ------------
xxxxxxxxxsmallRNA(fl3)xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   ------------
xxxxxxxxxxxxxxxsmallRNA(i2)  <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)----------------------->TaNAC69(2)
xxxxxxx>smallRNA(i2) xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      x
xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <------MYB83xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<xxxxxxxxxxxxxx
xxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <--
xxxxxxxxxxxxxxxxxxsmallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
xxxxxsmallRNA(fl3) ------>MYB46(1)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------bZIP60(1) xxxxxxx
 
gctacaccaactgtttttaaccgaacaaaggaaggttgtttggtttcttatgttgagaatgatggtgttgttggtgacttcatcactcaattccaattca  25353200
                                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
                                                                  <---------WOX13(1)
                                                                <---------ICU4
                                                               <---------YAB1
                                                               --------->ICU4
                                                              <xxxxxxxxxxxxxxxxsmallRNA(i)
                                                        --------->ARR14(2)
                                                     --------->ANAC55(2)
                                                     <---------ANAC55(2)
                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                                  <---------SPL7--------->ATHB12
                                                <---------------AtSPL3
                       <xxxxxxxxxxxxxxxxsmallRNA(i)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
            --------->GLK1(1)              <----------DOF2   --------->YAB1
         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <---------------AtSPL8                         <xxxx
         --------->ANAC58                  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                <xxxxx
         --------->ANAC58                xxxxxxxxxxxxxxxx>smallRNA(i)         <---------ARR11(3)
        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <xxxxxxxxxxxxxxxxxxxsmallRNA(i2)       <---------WOX13(1)
xxsmallRNA(si3)     --------->ANAC58 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
------AGL1  <---------GLK1(1)        <---------ARR14(2) <---------ARR14(2)  <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
xxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------LBD16    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
xxxxxxxxxxxxxsmallRNA(fl3)           <---------GLK1(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)-------
xxxsmallRNA(i2)    xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <------------CBF    <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
>CBF   xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<xxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
----->AGL1xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      <xxxxxxxxxxxxxx
xxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxxxxx>smallRNA(i) <---------GLK1(2)------------>CBF  xxxxxxxxx
xxxxxxxsmallRNA(si3)--------->ANAC58 --------->ARR14(2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<--------
----ZmHOX2a(1)     <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <-------TEIL
xxxxxxxxxxxxxxxx>smallRNA(i2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<------------CBF  ----------->HVH21
 
ggactctccctcaagaaatccacaagctcgacattttccatattcgctttggaagtacggattgtcatgattggaacacaatatccctgatagatgcgga  25353300
                             ---------->DOF2
                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
    <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
   <-----------GT1        <---------YAB1
   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
  <-------TEIL           xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
 --------->CCA1(2)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
 <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
--------->ARR14(2)     xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
<---------ARR14(2)    --------->ARR11(3)
xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
xxxxxxxxxxxxxxxxxsmallRNA(fl3)       ------------>CBF
xxxxxxxxxxxxxxxxxsmallRNA(fl3)--------->DAG2
-->LBD16              xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
xxxxxxxsmallRNA(i2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
xxxxxxxxxxxxxx>smallRNA(i2)--------->YAB1                                                  ---------
-LBD16<xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                    <---------AHL20(2)         <-----------HVH21
 
agggatacaccgtttgaatttcatagataatgaaaagtgcttcaataccgaagtaagtttgatttttttttatgttttagtctctatttatgtcacacta  25353400
                          <---------ANAC46
                   --------------->AGL15
          <-----------ARR10
          --------->ARR14(2)
          --------->ARR14(3)
          --------->ARR11(3)         <---------ANAC58
          <---------ARR11(3)         <---------ANAC46                                        <xxxxxx
          <---------ARR14(2)         <---------ANAC58                              --------->ZAT18
          <---------ARR14(3)  <---------YAB1                                       <---------ZAT18
      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
    <---------DOF5.7(2)   ----------->GT1                                    xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
  --------->DOF5.7(2)   --------->ZAT14                             --------->ZAT6 xxxxxxxxxxxxxxxxx
<---------ANAC46   <----------DOF2  --------------->AtSPL3    --------->GLK1(2) ----------->GT1
>ZAT6------------>CBF   <---------ZAT14     ---------->DOF2------------>CBFxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
 
atgtcgttaacaatatcttcttctttgtgtagtataattttcgtacaaaaagattaagtcaaaacaatctttcactaacaaaatggtgaactatgtgaat  25353500
                 --------->ARR11(3)
           ----------->GT1
           <------MYB46(1)
           <------MYB83
      --------->ALFIN1
    --------->TGA1a                           --------->HSFB2a(1)
    <---------O2--------->GLK1(1)             <---------HSFB2a(1)
    <---------bZIP60(2)             ------->MYC3
    ====================================bZIP_DOF                            --------->ATHB12
    --------->O2<---------GLK1(1)   <-------MYC2                           --------->ICU4
    <---------TGA1a                 <-------MYC3                           <---------YAB1
    <---------ANAC46   <---------YAB1         --------->KAN4(1)          --------->YAB1            -
 ----------->HVH21  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             <----------DOF2     <---------AHL20(2)
xxxxxxxxxxxxxxxxsmallRNA(si3)---------->DOF2  <---------KAN4(1)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
xxx>smallRNA(si3)<---------ARR11(3) ------->MYC2             --------->MYB52(1)   <-----------GT1 --
 
gggctcgacgtggaaggtgatatcttatttttgaaagcatgtggatgggatgttccaagagagattacggtccctttcatgatttatacttattttttga  25353600
                                      <---------MYB52(1)
                                     <---------RAP2.6(3)
          <---------ICU4      --------->CCA1(2)
   <---------MYB46(3)      --------->ANAC46         --------->YAB1                      --------->ARR11(3)
-------->DAG2  --------->At4g35610   <-------GAMYB  <---------ICU4               <---------AtLEC2 --
-------->DOF2  --------->ANAC46     <---------MYB46(3)                      --------->TOE2(3)     <-
 
aaaaagcggttcaacatcacctcactatctacgatatggccgttattgccctgaatcatcgcaaaccccctaaattcaacctttgcaagatggtcttgga  25353700
                                                                                          <---------
                                                                                          ----------
          <---------GLK1(1)                                                          <---------MYB46(3)
          <---------ARR14(2)                                                        <--------P
          --------->GLK1(1)                                                        <-------GAMYB
          --------->ARR14(2)                                                    <---------LBD16
     --------->LBD16                                                            --------->LBD16
     ----------->GT1                                                           --------->ANAC46
    <---------ANAC46                --------->ANAC46          <---------At5g28300 <---------MYB46(3)
   <---------LBD16                <-----------GT1           <-------TEIL<------ZmHOX2a(1) <---------
---------->DOF2             <----------DOF2                --------->CCA1(2)<---------ARR14(2)
------->ARR11(3)            <---------DAG2                <---------GLK1(2) --------->ARR14(2)
--------ARR11(3)          ------->TEIL         <---------YAB1 <---------LBD16 <---------LBD16
 
agataatgcggagaattcccaagaagatgaactttttttacgaaagacttatgagaagatagattcacggctagaggagtacccgcggttgttctttaag  25353800
                         --------->MYB111(2)
                         ----------->GT1
                         --------->MYB46(2)
                         --------->MYB111(1)
                      <------MYB46(1)
                      <------MYB83
                     --------->MYB111(1)
                     --------->MYB59
                     --------->MYB111(2)
                     <---------AtMYB61
                     --------->MYB52(2)
                   <---------MYB52(1)
                 <------MYB46(1)                            <---------bZIP60(1)
                 <---------MYB46(3)                         --------->bZIP60(1)
                 <------MYB83                             <---------ICU4
               <---------WOX13(1)            <---------ANAC46<-----------HVH21
             --------->ATHB12                <---------REM1(1)
             -------->HAHB4             <--------ATHB1    --------->YAB1
            --------->ICU4              <---------ICU4<---------AHL20(2)                        ----
       --------->At5g28300              --------->YAB1--------->AHL20(2)                     <------
------AGL15 <---------YAB1             --------->ICU4--------->AHL20(2)              ------->TEIL
----->AGL15 <---------ATHB12   ---------->DOF2  ----------->GT1      <----------DOF2<---------GLK1(2)
-DOF2 ----------->GT1--------->MYB46(2)<---------ATHB51  <---------ATHB12           <---------CCA1(2)
 
aagaatagatggtaaatgattggttaggtagttataaagacaataatggtgtagaaataaatcatgtcatgtcttttaggtgttcttgaatctctgtgtc  25353900
                                                      <---------MYB59
                                                     --------->ANAC55(2)
                                                     --------->ANAC46
                                                     --------->ANAC58
                                                     --------->ANAC55(1)
                                                     ----------->GT1
                                                     <---------ANAC55(2)          --------->DAG2
                                                <---------------AtSPL3        --------->AHL20(2)
                                             --------->ATHB12        <---------ANAC46
                                            --------->ICU4           <---------ANAC58
                         ----------------->AGL3 <---------------AtSPL8--------->LBD16
                  <---------MYB52(1)      <---------ANAC58          <---------LBD16
      ------>ZmHOX2a(1)  ----------------->AGL2 <---------ICU4 --------->ATHB12  ---------->DOF2
----->WOX13(1)   --------->TOE2(3)        <---------ANAC58--------->MYB46(3) --------->AHL20(2)
-----HVH21  --------->At4g35610     <----------DOF2  --------->ANAC58<---------ANAC58       <-------
 
agtcatttcctaatgagcacccttagattccaaatacagcttttggcctgattagtacgtaactactgatttgcggataaataaaaaagtattagtaact  25354000
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AGI:  At1g67635.1   
Description:  similar to phosphatidylinositol 3- and 4-kinase family protein [Arabidopsis thaliana] (TAIR:AT1G27570.1); contains domain PTHR15245:SF11 (PTHR15245:SF11); contains domain PTHR15245 (PTHR15245)
Range:  from: 25353483    to: 25353815    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.