Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <------------                                                                                      --------->ZAT18                                                                        xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                            --------->ZAT18             xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                            --------->AHL20(2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <xxxxxxxxxxxxxx                            <---------AHL20(2)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)   <xxxxxxxxxxxxxx                         --------->AHL20(2) <---------ZAT18             xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                 <---------ZAT14            <---------ZAT14           <---------------AtSPL8                 --------->ZAT14    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)----------->GT1--------->ZAT14                 --------->ZAT18   --------->ZAT18               --------->DAG2     <---------------AtSPL8                 <---------ZAT18   --------->ZAT14              ---------->DOF2  <---------AHL20(2)                <---------ZAT6 <---------------AtSPL8      --------->ZAT6     xxxxxxxxxxxxxxxxxxxxxxx               --------------->AtSPL8     <---------SPL7  <---------ZAT14  xxxxxxxxxxxxxxxxxxx>smallRNA(si3)               <---------------AtSPL8   --------------->AtSPL8 xxxxxxxxxxxxxxxxxxxx>smallRNA(l2)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      <---------ZAT18 xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxx>smallRNA(le3)   --------------->AtSPL8    xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ANAC46<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  xxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---------ZAT14 --------->REM1(1)--------->ALFIN1<---------------AtSPL3 ------------->AtSPL8   <---------AHL20(2)<---------ZAT18 --------->ZAT14 xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------------AtSPL8   --------->AHL20(2)--------->ZAT14 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   ttttgtacaacatttttagtgtacaaataaataaatgtacacagcgtacacttacatctgtacactaaaagtgttgtacaaatttaagtgtacgaatcaa  24557700                                                 <---------ANAC58                                      <-------TEIL    ---------->DOF2                 --------->ARR14(2)    <---------ZAT6  --------->YAB1             <---------ARR14(2)  <---------ANAC58 <---------YAB1              --------->ARR14(2)  --------->ANAC55(2) ---------WRI1          ----------->GT1         ------->TEIL                   ------->TEIL xxsmallRNA(i)        --------->ARR14(2)    <---------------AtSPL3         <---------------AtSPL8 xxsmallRNA(s)        <---------ARR14(2)    --------------->AtSPL8    <---------AHL20(2) >smallRNA(le3)<----------DOF2    --------->ANAC46    <---------YAB1  --------->AHL20(2)           --   actatgaaaagtcactactttgcaaatcgtgaatacccgatacatgtttgtacgtgtttattgttagacgattttattttgtacgttgcattagttagac  24557800                                                                                                -----                                                                                           <---------LBD16                                                                                         --------->KAN4(2)                                                                                         --------->ARR14(2)                                                                                         <---------ARR14(2)                                                                                        --------->KAN4(1)                                                                                        <---------KAN4(1)                                                                                        --------->GLK1(1)                                     --------->MYB52(1)                                 <---------HSFB2a(1)                                     <---------WRKY18(1)                                <---------GLK1(1)                                    ----------->HVH21                                   --------->HSFB2a(1)                                   <----------DOF2                                      <----------TaMYB80                                   <---------WOX13(1)                                  <-----------ARR10                                  <---------ANAC58                                     --------->ARR11(3)                                  <---------ANAC58                                     <---------ARR11(3)                                  <---------AtLEC2                                     <---------KAN4(2)                            --------->AHL20(2)                                         <---------ARR14(2)                        --------->AHL20(2)                        --------->At4g35610  ----------->ARR10                       <---------ARR11(3)                  <-----------GT1             --------->ARR14(2)                       --------->ARR11(3)               <---------ICU4        --------->YAB1    -----                       <---------AHL20(1)              --------->ICU4<-------TEIL      ---------->TaMYB80             ------->TEIL   <---------AHL20(2)    ----------->GT1--------->ANAC58  --------->At4g35610 ------->AHL20(2)      --------->AHL20(1)    <---------AHL20(2)  --------->ANAC58  <---------At4g35610   ataaaatacaatatgtatgtctgaaaatatttatttgcttgacggttttaatttgtaattttcacctaagctacatggaatcgtaagcggatattcggaa  24557900                                           ------->TEIL                                          <---------AtLEC2                                         <-------TEIL                                      <------ZmHOX2a(1)                          --------->ARR11(3)                                    <---------TOE2(3)                            <---------ARR11(3)                               <---------AHL20(2)                               --------->CCA1(1)                               --------->AHL20(1)                               --------->RVE1(1)         --------->LBD16      <---------AHL20(2)                            --------->AHL20(2)         ----------->GT1      --------->AHL20(2)                            ----------->TBP       <---------At4g35610<---------HSFB2a(2)                               <---------AHL20(2)    ---       --------->At4g35610--------->HSFB2a(2)    --------->AHL20(1)     <---------AHL20(2)       <--- ---->ANAC58              --------------->AGL15------->TEIL             --------->AHL20(2)  --------- ---->ANAC58  --------->CCA1(2)--------->AHL20(2)--------->ARR11(3) --------->AHL20(2)   --------->YAB1   gcatttggaagcggagaaacgagtttttctaaaaaaattaggatgcatgtatatattggaagtatgtgtataaattatataaatatctaattcataatat  24558000                                                                                           ----------                                     <---------ANAC55(2)                               --------->ALFIN1                       <---------RVE1(1)                                             <---------ANAC58                      <---------ARR11(3)                                             <---------ANAC58    --------->AHL20(1)--------->ARR11(3)    <---------AHL20(2)                       <---------ANAC46    <---------AHL20(1)--------->ARR14(2)    ----------->TBP                       --------->ALFIN1 --------->AHL20(2) ----------->ARR10----------->GT1                            <-----------RAV1(1) ------>YAB1      ---------->DOF2    --------->ANAC55(2)                     <-------TEIL <---------ZAT6 ----TEIL<---------AHL20(2)      --------->YAB1                             *TSS<---------O2--------- >YAB1 <---------AHL20(2)  --------->YAB1   --------->AHL20(2)          ---------->DOF2<------NtERF2   tcataatatataaaaatttgaaaagatattcagaataataggtgatataaatgtctaatcgaatatagttgtatgaaagttcatgtggcgtagtggtaaa  24558100                                                               --------->AHL20(2)                                                               --------->AHL20(1)                                                               <---------AHL20(2)                                                              <---------AHL20(2)                                                              --------->AHL20(2)                               <------ZmHOX2a(2)          <---------AHL20(2)                           <-------TEIL                   <---------YAB1                        --------->ZAT2                    --------->AHL20(2)                        <---------ZAT2               --------->ANAC55(2)                 <---------AHL20(2) --------->ANAC58      <---------TOE2(2)            <---------TOE2(3)             --------->TOE2(3) --------->ANAC46      <---------TOE1(2)       <---------AHL20(2)                ----------->GT1 --------->ANAC58     <-----------RAV1(2)      --------->AHL20(2)                --------->YAB1 ->GT1  <-------TEIL--------->ANAC46   <---------ANAC46  --------->AHL20(2) <---------KAN4(2)-------- >At5g28300       <---------ALFIN1------>ZmHOX2a(1)<-----------GT1       ----------->GT1 --------->AHL20(2)   tactcgcaaatgcattctctccacccaggttcgatcctatggagtttatttttttacgttttaattaaattacaggggtataatcgtaaatttaaacaca  24558200                                          ---------->DOF2                                 <---------MYB52(1)                                 <---------ARR14(2)                                 --------->ARR14(2)                               --------->DEAR3(1)                              <------NtERF2                     <----------DOF2        --------->HSFB2a(2) <---------DEAR3(1)      ---------->ID1   <<<<<<<<<TBF1           --------->ATERF1(1)     <-----------GT1 ->ANAC46          --------->TOE2(3) ------>ZmHOX2a(1)     <<<<<<<<<TBF1       <---------TOE2(3)   acttcttcttcccaaacaaaaccctagtagtcgccgttcctctgtaaagtttttttccttcttcttcttttttgaatttttaagttttgttcatcgtttt  24558300                            --------->WOX13(1)                           ------>ZmHOX2a(2)                          <------ZmHOX2a(2)                         <---------ARR11(3)                         <---------AGP1                         --------->ARR11(3)                         --------->AGP1                     ---------->DOF2            --------->TOE2(3)            --------------->AGL15            --------->GLK1(1)                      ------>ZmHOX2a(1)            <---------------AGL15           <---------GLK1(2)                   <-----------GT1           ----------------->AG    --------->YAB1   --------->TOE2(3)       <---------DAG2           ----------------->AGL1 <---------ATHB12  --------->TOE1(3)       <----------DOF2   ctcattcaacttaaccaaaatgtgaaagatctatcaataatctacagatttctaccttaaaactgaagttttggacaacttttttcctcaccgatttgtt  24558400                               --------->ARR11(3)                          <---------AHL20(2)                         --------->AHL20(2)                         --------->YAB1                   ------>MYB83<---------ARR11(3)                   ------>MYB46(1)                  --------->ORA47(1)                 --------->MYB46(3)                                                          --------                 --------->DEAR3(1)   --------->ANAC46                              <---------HSFB2a(1)                 --------->DREB2C(2)  --------->REM1(1)                             --------->HSFB2a(1)                 --------->DEAR4(1) <-----------GT1                      ----------------->AGL1                --------->DEAR3(2)<----------DOF2             --------->ARR14(2)    <---------HSFC1(2)  <---------MYB52(1)    <---------ATHB12                   <---------MYB59          --------->HSFC1(2)   ttctgttttgtcaaaaacaccgaccaataaaaatgtctttacatcaccagcatttctaataccgaattctaaaattccatataagaaaattccaaaaaaa  24558500                                                             --------->CCA1(2)                                                            <---------ARR11(3)                                                            --------->ARR14(2)                                                            <---------ARR14(2)                                                          ----------->ARR10                                                      --------->LBD16                                                      ------>NtERF2                                                     <---------ETT(1)                                                     <---------LBD16                                                    <---------LBD16                                                    --------->RAP2.6(3)                                              ------>ZmHOX2a(2)                                             --------->CCA1(2)                                             <------ZmHOX2a(2)                                            --------->ARR11(3)                                            --------->AGP1--------->ANAC58                                            <---------AGP1--------->ANAC58                                            --------->ARR14(2)                                            <---------ARR14(2)                             <--------- ->AHL20(2)                                 <---------ARR11(3)<-------TEIL     ---------->DOF2<------   ttccaactctatgctacatagataacaaaaacttcaaaattcaacagatctgattccggcaagatacaccagaactaatgtgaaagtctctaactttcat  24558600  Previous    Next  AGI:  At1g65960.1    Description:  GAD2 (GLUTAMATE DECARBOXYLASE 2); calmodulin binding. Identical to Glutamate decarboxylase 2 (GAD2) [Arabidopsis Thaliana] (GB:Q42472); similar to GAD (Glutamate decarboxylase 1), calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G17330.1); similar to glutamate decarboxylase 2 [Brassica juncea] (GB:AAS79669.1); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region, subdomain 1; (InterPro:IPR015421); contains InterPro domain Pyridoxal phosphate-dependent decarboxylase; (InterPro:IPR002129); contains InterPro domai Range:  from: 24558076    to: 24561094    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.