Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <----------DOF2 <---------MYB52(1)                                                           <-----------GT1      --------->At5g28300                                                           --------->ZAT6      --------->LBD16    --- --->ZAT14             ----------->GT1  <------MYB83  <----------DOF2  <----------DOF2            === ----DOF2         <---------ANAC46      <------MYB46(1)  <-----------GT1       ----------->GT1 <-----   actcgagttgaaatcgtatgacttatagtgaaattgtacatttggtttcgatttttcttttacactctttcttctttgagccggtaaatttggaattttt  24290100                                        --------->ANAC46                                       <---------TOE2(3)      <----------DOF2                                      <---------DOF5.7(2)     <---------DAG2                              <---------YAB1            --------->YAB1                  <---------AHL20(2) ------------>AGL15        <---------------AGL15        ----------->GT1               <---------AHL20(2) ==========================================MADS_MADS--------->ATHB12              --------->YAB1 ------GT1 --------->YAB1  --------------->AGL15 --------->YAB1            ---------->DOF2       ----   cttcatagtggaatcatatgctgttttttttttttatagtaaacgttacaagaatgaatggtaactttatccaaaaaaaaagaatcatattattttgaaa  24290200                           --------->TOE1(2)                                    <---------YAB1                        --------->AHL20(2)                                <---------AHL20(2)     ----                   <-------TEIL                <---------AHL20(2)    <---------YAB1         <--------       --------->AHL20(2)  --------->TOE2(2)  --------->AHL20(2)  --------->AHL20(1)        --------- ----->ICU4    <---------TOE1(2) --------->CCA1(2)               --------->AHL20(2)        --------->AHL20(2)   tgattttaagtaaattctaggttcaataacataagatttgagactaaatttaaaatttcttagtaaaatatatgatttttttataaatacctataaaatt  24290300                  <---------ANAC55(2)                  <---------ANAC58                  <---------ANAC46                  --------->ANAC55(2)                  <---------ANAC55(1)                  <---------ANAC58                                  --------->ARR11(3)                 --------------->AtSPL3                             <---------ARR11(3)        <------                 <-----------------------TaNAC69(2)                 <---------GLK1(2)         <------      --------->ZAT6                                              ----------->ARR10        --------->WOX13(1)     <---------TOE2(3)                               <---------HSFB2a(2)                  <---------AHL20(2)    <-----------GT1                                  --------->HSFB2a(2)                  --------->AHL20(2) ------->GT1     <---------------AtSPL3              ------>ZmHOX2a(1)                --------->ICU4 -AHL20(2) --------->ANAC55(2)                       --------->HSFC1(1)               --------->AHL20(2) >AHL20(2) <---------ANAC55(2)     <----------DOF2   <---------HSFC1(1)            <---------AtLEC2   agtaattaacaatacggattacgtactgaatcaaaccctttgtattttgtttttcctagaaataagtgtagatttttggaattttgcattaattaatcac  24290400                                         --------->KAN4(2)                               *TSS                                        <---------HSFB2a(1)                           <---------ANAC58                                        --------->HSFC1(2)                       <---------ANAC58                                        --------->KAN4(1)                        <---------ANAC58                                        <---------HSFC1(2)                   <-----------HVH21                                        <---------KAN4(1)                   --------->ZAT2                      ---------->DOF2   --------->HSFB2a(1)                 --------->ANAC46             ----------->GT1           <---------KAN4(2)                  --------->HSFB2a(2)       ----------->HVH21        ---------->DOF2               <---------ALFIN1  <------NtERF2 -----GT1   ----------->GT1<---------ARR14(2)           <---------ARR11(3)<---------HSFB2a(2) ---ICU4 ---------->DOF2   --------->ARR14(2)        <----------DOF2<---------ALFIN1  <---------ANAC58   ttcttgggtctgaaaggctaaaacaaaaggaaccgaaagagaatgttctctctgtctttatcttccacttccacttccaggtcgcgttgcttcactctcc  24290500                                                                         <---------MYB59                                          <---------HSFB2a(1)            --------->TOE2(3)                                          --------->HSFB2a(1)     ------>NtERF2                                     ----------->HVH21            <---------RAP2.6(3)                                   ----------->RAV1(2)           --------->RAP2.6(2)                              ------->GAMYB                   ------->GAMYBXXXXXXXXXXXXXXXXXXXX>MIR1886.3                             <---------MYB52(2)              --------->MYB46(3)                            <---------At4g35610             ----------->RAV1(2)                            --------->At4g35610             <---------At4g35610               ------>ZmHOX2a(1)                        --------->HSFB2a(2)                 --------->At4g35610               -------  ---------->DOF2   <---------GLK1(1)--------->LBD16 <-----------GT1<----------DOF2    <----------DOF2   attgcaaagagaggtctctgcgatttctgcaactcacccctgaaaccttcttaatttacttcaactgccgctatacctaaaaacttcatctttctcctct  24290600                                                                                         ------>ZmHOX2a(2)                                                                                        <------ZmHOX2a(2)                                                                                       <---------ARR14(2)          <---------ICU4                                                               --------->ARR14(2)          --------->ATHB12         <----------DOF2                                   --------->LBD16         <---------YAB1         --------------------->WRI1                          --------->HSFB2a(2)         --------->ICU4       <XXXXXXXXXXXXXXXXXXXXMIR854A-E                        <---------HSFB2a(2)       ---------->DOF2<-----------GT1                                          <---------At4g35610    --------->YAB1 --------->GLK1(1)                                           --------->ZAT2       -   <---------YAB1  <---------GLK1(1)                                           <---------ZAT2  ------ ---->RAV1(2)     <---------ARR14(2)  <---------ARR11(3)      <---------ANAC46 --------->At4g35610  -   gagctatgataaagattgcagatttcactctcttcttctttatcttcgtcttctctccctcgttgcctctagctcaatctcagcttcccgatctcgaccc  24290700                                                                     --------->ANAC58                                                                     --------->ANAC58            <----------DOF2                          <---------HSFC1(2)       --------->HSFC1(2)                  --------->TOE2(3)        --------->SPL7       <---------HSFC1(2)                  <---------MYB59        <---------SPL7    ---------->DOF2                    --------->ANAC58         <---------------AtSPL8 -------->ANAC58                       --------->ANAC46         <---------------AtSPL3              - --->MYB46(3) --------->ATHB12         --------->ANAC58    --------->ETT(2)                         < -------->ANAC58                     <-----------GT1 --------->HSFC1(2)   ---------->CDC5      ------   acaagacaaagcttctttattgatattcagagtttcgattcacgacctaaatcgaagcttatcgacatggtacggctcatcgtgttctaactggacaggt  24290800                         --------->ARR11(3)               --------->MYB52(1)                                       --------->MYB46(3)             ----------->HVH21                                         --------->ANAC46          --------->GLK1(2)                                          <-----------GT1          --------->ARR14(2)                                      <---------ARR14(2)          <---------ARR14(2)                                      <---------GLK1(2) <---------ANAC58        <---------ARR11(3)                       --------->ARR14(2) <---------ANAC58     --------->DAG2       <---------LBD16   <-----------HVH21 <----------DOF2 -------->STY1(2)    ---------->DOF2  <---------DAG2------->TEIL --------->At4g35610  <---------At4g35610 ---------STY1(2) --------->LBD16     <----------DOF2     --------->ZAT14  <---------CCA1(2)        - --->AGP1<---------GLK1(2)         <---------ALFIN1<---------GLK1(2)<-------TEIL      --------->At4g35610   ctagcttgtcagaatccgaccggaaaagttctctccctcactttatccggtctgaatctctccagtcagattcacccatctctttgtaagctctcttctc  24290900                                                              <---------ANAC55(2)                                                              <---------ANAC55(1)                                                              <---------ANAC46                                                              --------->ANAC55(2)                                                              <---------ANAC58                                                              <---------ANAC58                                                           <---------MYB52(1)                                                          <-------GAMYB                                                         --------->MYB52(2)        --------->TOE2(3)<                                     --------->HSFB2a(1) <---------MYB46(3)        --------->YAB1   -                                     <---------HSFB2a(1)<-------TEIL         --------->ANAC55(2)   <-                               <---------HSFB2a(2)     <---------MYB52(1)    --------->ANAC55(1)  ---                               --------->HSFB2a(2)   <---------DEAR3(2)      <---------ANAC55(2) <---            <----------DOF2   <---------LBD16    <---------ANAC58         <---------ZAT18        ---- --------->DOF2       --------->MYB46(3)         <---------ANAC58        <------ZmHOX2a(1)     ------   ttcaaagcttggacctttctcacaacaacttctctggaaacattccttcttgcttcggttcgttgcgtaatcttaggacacttaatcttagtcggaatag  24291000  Previous    Next  AGI:  At1g65380.1    Description:  CLV2 (CLAVATA 2); protein binding. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT4G36180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22997.1); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 24290489    to: 24292912    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.