Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<---------
ARR11(3)
--------->
ARR11(3)
--------->
GLK1(2)
<---------
GLK1(2)
<---------------
AtSPL8
<----------
DOF2
<-------
TEIL
--------------->
AtSPL8
<---------------
AGL15
<---------
At4g35610
<----------
DOF2
--------------->
AGL15
--------->
At4g35610
--------------->
AGL15
----------------->
AGL3
--------->
ZAT2
====================================================
MADS_MADS
<---------
ZAT2
<---------------
AGL15
<---------
AHL20(2)
<---------
TOE2(3)
--------->
ARR14(2)
----->
WOX13(1)
--------->
ATHB12
----------------->
AGL1
--------->
LBD16
->
HSFB2a(2)
<---------
AHL20(2)
<---------
DAG2
<----------
DOF2
------
--
HSFB2a(2)
<---------
YAB1
<---------
ZAT18
<----------
DOF2
<---------
ARR14(2)
--------->
At5g28300
aattacacttttaagtacaatatttattgaattttagttccctttttaagaatctttttctttctccagagctgcattgggatttttgacactgtaaaca
23940300
<-
<--
--------->
ANAC46
<--
<---------
ARR14(2)
<--
--------->
ARR14(2)
<---
<----------
DOF2
------->
TEIL
<---
<---------
DAG2
<---------
CCA1(2)
<---------
LBD16
<---------
--->
YAB1
<---------
YAB1
<---------------
AtSPL8
---------->
DOF2
<------
taatactttttgaaaattttagtaatggaaattgtgatcatcttgtatctggtacag
gtcaaaaactctggagcatcgctaaaagttaagtttcttttgt
23940400
<---------
ANAC58
<---------
ANAC58
<---------
AHL20(2)
<----------
DOF2
--------->
ARR11(3)
------
GAMYB
--------->
YAB1
-------
MYB46(3)
<---------
ICU4
-------
DEAR3(2)
--------->
AHL20(2)
--------->
ATHB12
<---------
ANAC46
-------
SPL7
<---------
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
------
DREB2C(2)
----------->
GT1
--------->
ICU4
--------->
TOE2(3)
---------->
ID1
------
At1g77200
<---------
YAB1
--------->
YAB1
<---------
ATHB12
<---------
ANAC58
-
DOF2
<---------
TOE1(3)
<---------
YAB1
--------->
ICU4
<---------
ANAC58
<------
-----
RAV1(1)
<---------
TOE2(3)
--------->
ZAT6
<---------
ICU4
<---------
AHL20(2)
--------->
YAB1
cggtcgctataagttaatgttgataaatttgtttgtaatactatagtttaataatcaccgaaatcattaatttcttgtttcttgtccatttgtaatcttt
23940500
<---------
YAB1
--------->
ATHB51
<---------
ICU4
-------->
ATHB1
<-----
--------->
ATHB12
<------
--------->
AHL20(2)
--------->
ANAC55(2)
<---------
AHL20(2)
<---------
ANAC55(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<----------
DOF2
<-----------
GT1
----------->
GT1
--------->
MYB111(1)
<---------
DAG2
--------->
AHL20(2)
--------->
MYB52(2)
---------->
DOF2
<---------
ICU4
<---------
MYB46(3)
<---------
MYB46(3)
----------->
HVH21
--------->
YAB1
--------->
ANAC58
<---------
ATHB51
--------->
ANAC58
<---------
AHL20(2)
--------->
TOE2(3)
<---------
MYB52(1)
--------->
ANAC46
----------->
GT1
<--------
----
DOF2
--------->
ANAC58
--------->
ICU4
--------->
ANAC58
--------->
LBD16
--------->
AHL20(2)
ttttcttaaatgcaagcatttgttagtta
aattattagtagttgctaaacacacaaagtgacacttttctccagagaattgtgacattaattacttaatt
23940600
<---------
ANAC58
------->
MYC2
<-------
PIF5
------->
PIF5
------->
MYC4
<-------
MYC3
<-------
MYC4
------->
MYC3
<-------
MYC2
<---------
PIF3(3)
<<<<<<<<<<
HY5
<---------
TGA1a
===================================
bZIP_DOF
--------->
bZIP60(2)
--------->
O2
--------->
PIF3(3)
>>>>>>>>>>
HY5
----------->
GT1
<---------
bZIP60(2)
<---------
AHL20(2)
<---------
O2
*
TSS
--------->
AHL20(2)
----------------->
PIF3(1)
--------->
HSFB2a(2)
--------->
ICU4
<---------------
AGL15
--------->
ANAC58
<---------
ANAC58
<---------
YAB1
===============================================================================
MADS_MADS
<---------
AHL20(2)
--------->
ANAC46
<-----------
GT1
--------->
MYB52(2)
--------->
AHL20(2)
---------->
DOF2
<----------
DOF2
----------->
GT1
<
--------->
ICU4
=================
bZIP_DOF
--------->
ANAC46
<---------------
AGL15
--------->
YAB1
----
WOX13(1)
<---------------
AtSPL8
<---------
ANAC58
------>
ZmHOX2a(1)
----------->
GT1
-
------
CBF
<---------
TOE2(3)
--------->
TGA1a
<---------
ALFIN1
----------------->
AGL1
<---------
ICU4
-
AHL20(2)
--------->
MYB59
--------->
ANAC58
<---------
ALFIN1
<---------
ANAC58
<--------
P
<-------
gaagtattaattaataaggtataaacaaaaaagccacgtggcttctcttctccactcctctttttattccttcccaaacaagaaggttagtt
attattat
23940700
--------->
ABI4(2)
--------->
GLK1(2)
--------->
KAN4(2)
<---------
ARR14(2)
<----------
TaMYB80
<---------
KAN4(1)
--------->
KAN4(1)
-------
<---------
HSFB2a(1)
<------
<----------
DOF2
--------->
HSFB2a(1)
<---------
At4g35610
<---------
HSFC1(2)
<------
MYB83
<---------
DEAR3(1)
--------->
HSFB2a(1)
<------
MYB46(1)
<---------
AtMYB61
<---------
HSFB2a(1)
<--------
P
--------->
WRKY38(1)
<-----------
ARR10
<-------
GAMYB
<---------
At4g35610
----------->
ARR10
--------->
MYB55(2)
--------->
ALFIN1
--------->
LBD16
<---------
YAB1
<---------
MYB46(3)
<---------
MYB52(1)
---------
HSFB2a(2)
--------->
ATHB12
----------->
HVH21
-------->
HSFB2a(2)
<---------
GLK1(2)
--------->
ZAT2
---------->
TaMYB80
--------->
ALFIN1
--
YAB1
--------->
HSFC1(2)
<----------
DOF2
<---------
ZAT2
<---------
KAN4(2)
<---------
MYB46(3)
ttccagagaagcttctcttttgattctctcgctctctctttcttcatcgcctcttcgagcttcg
atggttgggaatattctggtgaccggtggtgctggt
23940800
--------->
At4g35610
<---------
At4g35610
--------->
ARR14(2)
<---------
ARR14(2)
<----
--------->
ANAC58
--------->
MYB46(3)
--------->
ANAC58
------>
ZmHOX2a(1)
------
----------->
HVH21
<---------
HSFB2a(2)
==========================
<-----------
HVH21
<---------
GLK1(2)
==========================
---->
GT1
<---------
ALFIN1
<---------
LBD16
--------->
DEAR3(1)
====================
HOX2a_HOX2a
---
MYB46(3)
--------->
ANAC46
--------->
HSFB2a(2)
--------->
TOE2(3)
<------
ZmHOX2a(2)
tacatcggaagtcacacggttcttcagcttcttctcggaggctataacaccgtcgttatagacaacctcgacaattcctctctcgtttcgatccaacgcg
23940900
<------
ZmHOX2a(2)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
GLK1(1)
<------
NtERF2
--------->
DEAR3(1)
<---------
LBD16
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
GLK1(1)
<---------
GLK1(1)
--------->
ARR11(3)
<-----------
RAV1(2)
<---------
ARR11(3)
--------->
SPL7
<-----------
ARR10
--------->
ORA47(1)
--------->
ARR14(2)
--------->
DEAR3(1)
<---------
ICU4
<---------
AGP1
<---------
At5g28300
--------->
ATHB12
<---------
ARR14(2)
<-----------
ARR10
<---------
YAB1
-------
HVH21
<---------
GLK1(1)
<-----------
GT1
<------
ZmHOX2a(2)
--->
ANAC46
--------->
LBD16
<---------
ARR11(3)
<----------
DOF2
===========
HOX2a_HOX2a
--------->
ARR11(3)
<----------
DOF2
<----------
DOF2
==========
HOX2a_HOX2a
<---------
GLK1(2)
--------->
ALFIN1
<---------
At4g35610
tcaaggatctcgccggagatcatggacaaaatctcaccgtccaccag
gtttggctatcttttcccttgctctgctctttggatcattgcattctgagaat
23941000
--------->
DAG2
--------->
TOE2(3)
<---------
ICU4
<---------
ANAC58
<----------
DOF2
--------->
YAB1
<---------
ANAC58
<---------
ANAC58
<---------
ATHB12
------->
TEIL
<---------
YAB1
<---------
ANAC46
--------->
ICU4
<---------
CCA1(2)
<----------
DOF2
<---------
ANAC58
ttcggtaatcatgacctcaaaaattgagagttttttttttgtatctcgatttgcttacaatgctttgggagttatgtttgatcaaattgcttttagtcgc
23941100
<---------
MYB52(1)
--------->
TOE1(3)
<------
ZmHOX2a(2)
--------->
TOE2(3)
--------->
HSFB2a(2)
----------->
GT1
----
<---------
HSFB2a(2)
<---------
TOE2(3)
------->
PIF5
<---------
LBD16
<---------
YAB1
------->
TEIL
<----------
--------->
GLK1(1)
<---------
GLK1(2)
<---------
ARR11(3)
<---------
CCA1(2)
-------
<---------
GLK1(1)
--------->
HSFB2a(2)
--------->
ARR11(3)
<---------
TOE2(3)
<-------
PIF5
agtggatttctggatcaaattgtgttcgagattatcgttaatctgagatttttgtttctgcaaatgttagatggctaatgtatcttatacctgcag
gtgg
23941200
Previous
Next
AGI:
At1g64430.1
Description:
similar to unnamed protein product [Vitis vinifera] (GB:CAO69536.1)
Range:
from: 23937043
to: 23940529
Orientation: Forward
Links:
TAIR
MIPS
AGI:
At1g64440.1
Description:
RHD1 (ROOT HAIR DEFECTIVE 1); UDP-glucose 4-epimerase. similar to UGE2 (UDP-D-GLUCOSE/UDP-D-GALACTOSE 4-EPIMERASE 2), UDP-glucose 4-epimerase/ protein dimerization [Arabidopsis thaliana] (TAIR:AT4G23920.1); similar to unknown [Populus trichocarpa] (GB:ABK95303.1); contains InterPro domain UDP-glucose 4-epimerase; (InterPro:IPR005886); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Nucleotide sugar epimerase; (InterPro:IPR008089)
Range:
from: 23940693
to: 23943562
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.