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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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             --------->RAP2.3(1)
            <---------DREB2C(1)
            <---------ATERF1(1)
            <------NtERF2
           --------->RAP2.6(2)
           --------->ATERF1(2)
         ------>NtERF2
      <---------LBD16
    <---------ARR14(2)
    --------->ARR14(2)
   <---------GLK1(1)
-----GAMYB--------->DEAR3(2)
------>At4g35610
-------ZAT2<---------ATERF1(1)
-------At4g35610
------>ATERF1(1)
----NtERF2--------->SPL7
------>ZAT2--------->RAP2.3(2)
----->MYB55(2)
------MYB46(3)
------ERF1--------->ATERF1(1)
------DEAR3(2)
------RAP2.3(1)
------ATERF1(1)
-->NtERF2<---------ATERF1(1)
-----ANAC46<---------ATERF1(2)
-----RAP2.6(2)                                      <---------TOE1(2)
-----RAP2.3(3)                                      <---------TOE2(2)
-----DEAR3(1)--------->DEAR4(2)                     --------->SPL7
-----ATERF1(2)  <---------ANAC46                  <---------SPL7
---->ATERF1(2) ------>NtERF2                      --------->TOE1(2)
-----RAP2.3(2)--------->DEAR3(1)                 ==================HOX2a_HOX2a
--->ATERF1(1)--------->ATERF1(1)                 ===============================HOX2a_HOX2a
--->DEAR4(2)------>NtERF2                        ============================HOX2a_HOX2a
--->RAP2.3(1)<------NtERF2                       ------>ZmHOX2a(2)                --------->ALFIN1
-NtERF2 <---------ATERF1(1)                --------->YAB1                       --------->ALFIN1
---DEAR4(2)<---------DEAR3(1)             <---------YAB1                 <------ZmHOX2a(1)     <----
---ATERF1(1)--------->DREB2C(1)           --------->ICU4  <---------TOE2(3)     <---------ANAC46
---RAP2.3(1)<---------At4g35610--------->ANAC58  =====================================HOX2a_HOX2a
--DEAR3(1)--------->RAP2.3(1)  --------->ANAC58 --------------->AtSPL3<------ZmHOX2a(1)        -----
--RAP2.3(2)--------->DEAR3(1) <---------LBD16<---------YAB1 <------ZmHOX2a(1)  <------ZmHOX2a(1)
 
ggctggagacccggccgccgcttggagcattagctcggaagtttgatgatgatcgtacgttgaggaaaacagaggaggatgaggagtggagattgctctg  23895400
                                                                   <---------ANAC58
                                                                   <---------ANAC46
                                                                   <---------DEAR3(1)
                                                                   <---------ANAC58
                                                                  <------NtERF2
                                                                 ------>NtERF2
                                                                 <---------MYB46(3)
                                                                --------->ALFIN1
                                                                ----------->HVH21
                                                                <---------AtMYB61
                                                               <-------GAMYB
                                                               <---------ABI4(1)
                                                               <------NtERF2
                                                               --------->ATERF1(1)
                                                              <---------DEAR3(2)
                                                              <---------DEAR4(2)
                                                              <---------ATERF1(1)
                                                              <---------MYB46(3)
                                                             <---------ANAC46
                                                             <---------DREB2C(2)
                                                             --------->ALFIN1
                                                             <---------AtMYB61
                                                             <---------DEAR3(1)
                                                            --------->ATERF1(1)
                                                            <------NtERF2
                                                            <---------ABI4(1)
                                                            ------>NtERF2
                                                           <---------RAP2.3(1)
                                                           ------>NtERF2
                                                           <---------RRTF1(1)
                                                          <---------DEAR3(1)
                                <---------ANAC46          <---------RAP2.3(2)
                               <------NtERF2              <---------RRTF1(2)
                      --------->ARR11(3)                 --------->At4g35610
                      <---------ARR11(3)                 <---------LBD16                           <
                     <---------GLK1(1)                <---------ZAT2 <------NtERF2                 <
                    <---------ARR11(3)                --------->ZAT2--------->LBD16                <
                   --------->YAB1                     --------->At4g35610    <---------YAB1       <-
        <---------ARR14(2)     <---------LBD16        <---------At4g35610<---------ARR14(2)   <-----
        --------->ARR14(2)   <---------DEAR3(1) --------->ARR14(2)--------->ATERF1(1)      <--------
     --------->ALFIN1--------->GLK1(1)--------->CCA1(2) --------->ALFIN1<------ZmHOX2a(1)--------->YAB1
-----ZAT14    <---------HSFB2a(2) <------NtERF2<------ZmHOX2a(1)<---------DEAR3(1)     <---------WOX13(1)
---->ZAT14    --------->HSFB2a(2)--------->LBD16<---------ARR14(2)<---------LBD16<---------ZAT6 ----
 
ttctgaaggtggaacttctcgatgatatctcgttggcggagatagacggaggacccgagctgcggcggtggcggaggattgtgagtgttgaatgatgttg  23895500
        --------->ANAC46
       <---------LBD16
  <---------ARR14(2)
  --------->ARR14(2)
  <---------GLK1(2)                                                     ------>ZmHOX2a(2)
 <------NtERF2                                              ===================HOX2a_HOX2a
---------ANAC58                                           ----------->RAV1(2)
---------ANAC46                                          ------>ZmHOX2a(1)
---------ANAC58                                          ======================HOX2a_HOX2a
--------LBD16                                       <------MYB46(1)    --------->At4g35610
------RAV1(1)                                       <------MYB83      --------->ARR11(3)
---RAV1(1)    --------->ALFIN1                     --------->MYB59    <---------ARR11(3)    --------
----->ALFIN1 <------ZmHOX2a(1)             <---------ANAC46 ------>ZmHOX2a(1)               <-------
 
tggcggattctacggaggagggagtgagaagtgagaagattgagtcgagtgtgtttggtcctcctgctaatatgatctgagacagagatgctctgatttc  23895600
                                     <----------DOF2
                                    <---------ANAC58
                                    <---------ANAC58
                               --------->ATHB12
                              <---------YAB1                                   ----------->GT1
                             <---------ARR11(3)                         <---------ANAC46
       <------ZmHOX2a(1)     --------->ARR11(3)                     <---------LBD16
--------->ARR11(3)          --------->RVE1(1)                      <---------ANAC46
<---------ARR11(3)          --------->CCA1(1)                  <---------HSFC1(2)           --------
->GLK1(1)            --------->HSFB2a(2)                -------->P <---------ANAC58         --------
--GLK1(1)            <---------HSFB2a(2)          <-----------GT1  <---------ANAC58 ---------->DOF2
 
tgagattttaggactgaaattgttctgaaaaatatcattgctttcttccattttttctcaaccagacgtttcgtggagtataagataaaaagaaacccta  23895700
                                                                       <---------YAB1
        --------->ATHB12                                            --------->ICU4            ------
   <---------YAB1                                                  --------->ARR11(3)        -------
->TOE1(3)            --------->YAB1                              <---------TOE2(3)          --------
->TOE2(3)           --------->ICU4     ---------->DOF2     <---------YAB1              ---------->DOF2
 
acaattgtgtttgatttgatagaatgatggtttttcaagttcaaaagagattgaacaagagtaagattgagataatgagagattgtttttgaaagaaaag  23895800
                            <---------AHL20(2)          <---------------AtSPL8
                           --------->AHL20(2)           --------------->AtSPL8
                       ------>ZmHOX2a(2)               <---------ANAC58
                      <------ZmHOX2a(2)              <---------ARR11(3)
    <------MYB46(1)  <---------ARR11(3)          ---------->DOF2
    <------MYB83     --------->ARR11(3)  <---------TOE2(3)         <---------AHL20(2)
----->GT1            --------->AGP1      <---------TOE1(3)       <-----------TBP
-->DAG2              <---------AGP1  <-----------TBP --------->ARR11(3)                  --------->ANAC58
-->DOF2          ---------->DOF2   *TSS ---------->DOF2<---------ANAC58                  --------->ANAC58
 
tagaatttggtttttttgtttaaagatctatttaatgggtttttaaagtttagaaagagcttgtacatatttatagacttagacagatagacaaggaaaa  23895900
                                                                                                 <--
                                                                         <---------TOE1(3)       ---
                                              <---------ANAC58           <---------TOE2(3)     <----
                                              <---------ANAC58         <---------AHL20(2)      -----
             <-----------TBP             <---------DAG2           <---------AHL20(2)          ------
      --------->DAG2               <----------DOF2              <----------DOF2    --------->MYB52(1)
    ---------->DOF2  <---------GLK1(1)   <----------DOF2   <<<<<<<<<TBF1---------->DOF2     --------
 
caaaccagaaaggttgttttatagatttcacatggacgctttgactttttcttgttgatttcttcttcttttatttaaagtttgccaaacgattttcatc  23896000
                                                       ------->GAMYB
                                                       --------->YAB1       <--------HAHB4
                                                      <---------MYB55(2)    --------->YAB1
                                                      --------->MYB46(3)    <---------ICU4
                                                     ------>MYB46(1)        --------->ATHB12
-------YAB1                                          ------>MYB83          <---------ATHB12   ------
------>ICU4                                          -------->P          --------->WOX13(1)   ------
-----ICU4                                       <-----------GT1          <-----------GT1  --------->YAB1
---->YAB1                                  <---------MYB59             <---------YAB1    <---------YAB1
--->ICU4                                   --------->TOE2(3)      <---------ZAT6   --------->AtLEC2
->YAB1                                  <-----------GT1--------->TOE2(3) --------->YAB1  --------->ICU4
 
atgattttgctacaaggtttctactctgagataatacaagtagataccttatttccaaccacaattctagtgttattaatcatttcatgctaattataag  23896100
              <---------CCA1(2)                                                           <---------AHL20(2)
            --------->ANAC55(2)                                                           --------->AHL20(2)
       <---------YAB1                                                                    --------->AHL20(2)
     --------->YAB1  <---------ARR11(3)                                            <---------YAB1
     <---------ICU4 <---------CCA1(2)                                            <---------ICU4
--------->ZAT14<---------ARR11(3)            <----------DOF2                     --------->YAB1
<---------ZAT14--------->ARR11(3)         <-----------GT1                       <---------ATHB12
--->ANAC58  <---------ANAC55(2)          <---------ARR11(3)                     --------->ICU4
--->ANAC58 <-------TEIL                  <---------AHL20(1)   <---------AtLEC2--------->YAB1
 
cactatactcatgatacatatctatatctatgagattgtatcaatatacttttctcttgcattttgcataaattcttctactaatcatgaaaattaatag  23896200
                                                                            <---------YAB1
                                                                          --------->ATHB51
                                                                          <---------ICU4
                                                                          -------->ATHB1
                                                                          -------->HAHB4
                                                                          <--------HAHB4
                                                                         <---------ATHB12
                                                                         --------->ICU4
                                                                  <---------CCA1(2)
                                                                <---------AHL20(2)
                                                            <---------RVE1(1)         <---------AHL20(2)
                                                           <---------ARR11(3)         --------->AHL20(2)
               <---------DAG2                              --------->ARR11(3)   <---------MYB59
               <----------DOF2                          <---------WOX13(1)--------->YAB1
       <---------AHL20(2)                            <---------YAB1      <---------YAB1
       --------->AHL20(2)                      ------->GAMYB<---------CCA1(1)<-----------GT1
   --------->YAB1                           --------->MYB52(1)  --------->AHL20(2)    <---------YAB1
  <---------YAB1   <---------YAB1    --------->TOE2(3)--------->YAB1     <---------ATHB51  ---------
 
agtctatgattttatttgctttattttagaatgtttttttcattagttaacagactatgatagatatttatatctaattattaccgaatataaatgattt  23896300
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AGI:  At1g64380.1   
Description:  AP2 domain-containing transcription factor, putative. Identical to Ethylene-responsive transcription factor ERF061 (ERF061) [Arabidopsis Thaliana] (GB:Q9C7W2); similar to RAP2.4 (related to AP2 4), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G78080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65814.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471)
Range:  from: 23894309    to: 23895836    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.