Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------ICU4      <---------YAB1                                        --------->YAB1                          -  --------->ARR11(3)                                        ----------->GT1                         <  <---------GLK1(2)                             ----------->GT1                                   <--  <---------ARR11(3)                     --------------->AGL15          --------->ANAC55(2)  <------- -------GT1----------->GT1               <---------------AGL15        <-----------GT1        -------- ->YAB1   ------>ZmHOX2a(2)           <-----------GT1      <---------ATHB12           --------->TOE2(3)   actagattttgatcggtttatatgaaacatgtgagtagtttttccacatgaagttaaaacaatcgttacaatttacatattctaaaaacatcaatacata  23750600                          <---------AHL20(2)                                              <----------                 --------->AHL20(1)                                                   --------->AHL20(2)          <------NtERF2   --------->AHL20(2)                                         <---------AHL20(1)         ------>NtERF2<---------AHL20(2)    <---------AHL20(2)                       <---------ARR11(3) -------->ANAC55(2) <---------AHL20(2)     <---------AHL20(2)                        --------->AHL20(1) ---------ANAC55(2) --------->AHL20(2)     --------->AHL20(1)                   <---------ATHB12 ---------GT1    <---------AHL20(1)        <---------AHL20(1)                  --------->ANAC58 --ANAC55(2)    --------->AHL20(2)         --------->AHL20(2)                  --------->ANAC46 ->ANAC55(2)<---------RAP2.6(3)       <---------ATHB12                         --------->ANAC58   ttacgaattggtgccgaaatatataaatttaaataagctaatcaatttattctacaaactattctcaaaatgtataagaccactcaatatatataccatc  23750700                                                                                  ------->TEIL     --                                                                                <-------TEIL       <-                               <-----------GT1    --------->CCA1(2)            --------->AtLEC2  <---                            <---------ICU4    --------------->AGL15         ------->TEIL         ----           ---------->ID1 <---------TOE2(3)  <-----------------AGL3 ----------->HVH21         ------- -GT1<---------DAG2 --------->ICU4     <---------TOE2(3)       <-------TEIL <-------TEIL      <------   gatgtcaatttttgtttttttaaagattaatatttactatttagatttcaaaatatgggttgaagtacatttgacatgtacatgcatttttggatatata  23750800                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  <--     <---------YAB1                                                                               ---  --------->AHL20(1)                                                                             ----  <---------AHL20(2)      <------ZmHOX2a(2)                                                      ----  <---------AHL20(1)     --------->AGP1                                                          ---- ------->AHL20(2)  <---------AHL20(2)                        --------->DAG2                 --------- --------AHL20(2)  --------->AHL20(1)                       ---------->DOF2      <-------GAMYB   ---- ------AHL20(2)    <---------AHL20(1)          --------->CCA1(2)                 --------->At4g35610 ----->AHL20(2)    --------->ARR11(3)         <---------ARR11(3)                 <---------At4g35610 -->AHL20(1)   <---------AHL20(2)             --------->ARR11(3)   <------ZmHOX2a(1)       ---------- ---AHL20(1)  --------->AHL20(2)        ---------->DOF2   <------ZmHOX2a(1)     <---------MYB46(3)<--   ttaatatatgattctatataatatatagatccaaaaacgttgtaaagagatatatagctaggaaaaggaggaaagacttaggcagttgaacagaaaagtt  23750900 -------->GT1                                                      ------>ZmHOX2a(1) ----MYB46(1)                                                      *TSS<-----------GT1 ----MYB83                                                        --------->TOE2(3) -------ANAC46                                                 <-----------GT1 ------>At4g35610                                              --------->ARR11(3) ----->MYB111(2)                                               <---------ARR11(3) ----->MYB59                                                  --------->CCA1(1) ----->MYB111(1)             <----------DOF2                  --------->RVE1(1) >DAG2                  <-----------GT1                   ----------->TBP                           - ----->MYB46(2)      <---------YAB1                <----------DOF2--------->TOE1(3)          ------>ZmHOX2a(1) >DOF2         ------------>CBF                <----------DOF2--------->GLK1(1)      ------>ZmHOX2a(1) -------ANAC55(2)   --------->AHL20(2)    <<<<<<<<<TBF1 ------>ZmHOX2a(1)     <----------------------   aggtgaatatagttggcttcaatattataccctttaactcattcttcttctttctttcctacaaatatccttataacctttcttctcctcttctccttct  23751000                                                                        <---------ARR11(3)                                                                        --------->ARR11(3)                                                                ------>ZmHOX2a(2)                                                               <------ZmHOX2a(2)                                                               --------->CCA1(2)                                                              <---------ARR11(3)                                                              --------->AGP1<---------ZAT6                                                              >>>>>>>>>GATA-4                                                              >>>>>>>>>GATA-1             <---------YAB1                                                              >>>>>>>>>GATA-2           <---------ICU4                                                              >>>>>>>>>GATA-3        --------->YAB1 ----->ZmHOX2a(1)  <---------AHL20(2)                         --------->ARR11(3)    <-------TEIL --ANAC81      <---------AHL20(2)    --------->AHL20(2)      --------->GLK1(1)---------->DOF2   tcctcttatgcaaacatatatttacataaacacacacatatatatagtaagagagagagagagagatctagcaagatagtgaaagcttcataatcaatgg  23751100                                                                                        <---------ICU4                            --------->TOE1(3)                                        <---------ICU4                      --------->YAB1                                                 -------->HAHB4                    <---------TOE2(2)                                                --------->YAB1                    <---------TOE1(2)                                               --------->ICU4                   ------>ZmHOX2a(1)                                <---------At4g35610<---------YAB1                  --------->TOE2(2)                              ------>ZmHOX2a(1)  <---------ATHB12               --------->ARR14(2)                               --------->TOE2(3)  <---------TOE2(3)               <---------ARR14(2)                      ------>ZmHOX2a(1)          --------->YAB1    -        ----------->RAV1(1)--------->ZAT6              <----------DOF2         --------->TOE2(3) ----   <--------P --------->GLK1(1)                  --------->MYB46(3) --------->At4g35610--------->ICU4   aaggggttgacaacacaaatcctatgttaaccctagaagaaggcgaaaacaacaatcctttttcttccttagatgacaaaacattaatgatgatggctcc  23751200                                                                                          <---------AtMYB61                                                                                  <----------DOF2                                                                                 --------->HSFB2a(1)                                                                                 --------->HSFC1(2)                                                                                 <---------HSFB2a(1)                                                                                 <---------HSFC1(2)                                                                               <---------ARR11(3)                         <-------TEIL                                          --------->ARR11(3)           <---------LBD16                                              <---------At4g35610       <--           <---------ANAC58                                             ----------->RAV1(2)     <----           <---------ANAC58                              <---------YAB1 --------->At4g35610  --------       <----------DOF2<------MYB46(1)             <-----------RAV1(2)   <---------ZAT2    --------->ALFIN1      <---------ICU4  <------MYB83               <---------ZAT2         --------->ZAT2--------->HSFB2a(2) <---------MYB52(1)  --------->MYB59             <---------At4g35610  <-----------RAV1(2)<------ZmHOX2a(1) -------->TOE2(3) <---------REM1(1)              --------->ZAT2    <---------At4g35610<---------HSFB2a(2) -->ZmHOX2a(1) <---------DEAR3(1) <<<<<<<<<TBF1<-----------RAV1(2) --------->At4g35610<---------LBD16   ttcgttaatcttttcgggcgatgtaggtccatcttcttcttcttgtactccagcaggttatcatctatctgctcagctggagaactttcgaggaggtgga  23751300                                 --------->YAB1                                --------->ICU4                                <---------ATHB51                        <---------ICU4       --------->YAB1         --------->DAG2                        -------->HAHB4      <---------YAB1  ---------->DOF2                 <--------                        --------->YAB1    --------->YAB1   <---------MYB52(2)            <---------ZAT14                       --------->ICU4    <---------YAB1    --------->MYB46(3)   <----------DOF2     <  --------->CCA1(2)    <---------YAB1 <---------ZAT6     ----------->RAV1(1) --------->ARR11(3)     < ----ZmHOX2a(1)      --------->YAB1 --------->YAB1      <----------ID1       <---------ARR11(3)<----- -----ANAC46      ----------->GT1<--------ATHB1    <---------ICU4  --------->DAG2        --------->ZAT14 ->ALFIN1 <------ZmHOX2a(1)     <---------ATHB12--------->YAB1    ---------->DOF2       --------->AtLEC2   ggagagatgggaggattagtgagtaataatagcaataatagtgatcataataagaattgcaacaaaggaaaagggaagagaactttggcaatgcagagga  23751400                                                                                                  <--                                               <---------DEAR3(1)                               <----                                           <---------YAB1              <-----------HVH21       <----- <----------DOF2      <---------YAB1       <---------TOE2(3)      --------->GLK1(1)           <------ -At4g35610--------->ANAC46            <-------GAMYB <---------------AtSPL3                 <-------- ---------ANAC58    --------->YAB1    <---------MYB46(3)    <-----------HVH21               --------- ---------ANAC58   --------->ICU4    <---------YAB1 ---------->DOF2--------->GLK1(2)        <-------- -ZmHOX2a(1)       <---------YAB1 <---------YAB1 <------NtERF2    <---------GLK1(1)        <---------   tagcttttcatacaaggagtgatgatgatgttcttgatgatggttatcgttggcgaaagtacggtcagaaatctgtcaagaacaatgctcatcccaggtt  23751500  Previous    Next  AGI:  At1g64000.1    Description:  WRKY56 (WRKY DNA-binding protein 56); transcription factor. Identical to Probable WRKY transcription factor 56 (WRKY56) [Arabidopsis Thaliana] (GB:Q8VWQ4;GB:Q8L9F6;GB:Q9SH51); similar to WRKY24 (WRKY DNA-binding protein 24), transcription factor [Arabidopsis thaliana] (TAIR:AT5G41570.1); similar to WRKY64 [Glycine max] (GB:ABS18452.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 23750967    to: 23752716    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.