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Chromosome 1
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Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------
--------->
ATHB51
--------
--------->
ATHB12
--------
<---------
YAB1
--------->
GLK1(1)
--------->
TOE2(3)
<---------
GLK1(1)
----------->
GT1
----------->
GT1
--------->
ARR11(3)
<---------
ZAT6
------>
ZmHOX2a(1)
<---------
ARR11(3)
--------->
DAG2
--------->
HSFB2a(2)
------>
ZmHOX2a(1)
--------
---------->
DOF2
<---------
HSFB2a(2)
<---------
ANAC46
--------
<---------
ZAT14
<---------
ARR14(2)
--------->
YAB1
---------->
DOF2
----------->
GT1
--------->
GLK1(2)
<---------
ICU4
--------->
TOE2(3)
<-------
---------->
DOF2
---------->
DOF2
<-----------
GT1
<---------
ICU4
<------
ZmHOX2a(1)
ctaaaatacaaaagaagtaaagtgttacacatttgaaaagaatcctagaatgttacattattgcaattttaaaaattccttataaaaaggatatcaagta
23085400
--------->
HSFB2a(1)
<---------
HSFC1(2)
--------->
HSFC1(2)
<---------
HSFB2a(1)
<------
ZmHOX2a(1)
<---------
TOE2(3)
<----------
DOF2
<---------------
AGL15
--------------->
AGL15
<---------------
AGL15
----------------->
AGL1
<---------
YAB1
===================================================
MADS_MADS
<------
MYB46(1)
--->
AHL20(2)
--------------->
AGL15
========================================
MADS_MADS
->
ANAC58
====================================================
MADS_MADS
<------
MYB83
--->
GT1
------>
ZmHOX2a(1)
<-----------------
AG
----------->
GT1
->
ANAC58
--------->
LBD16
<-----------------
AGL3
--------->
MYB59
->
ANAC55(2)
<---------
ARR14(2)
<-----------------
AGL1
----------------->
AGL3
--
ANAC55(2)
--------->
ARR14(2)
----------------->
AGL3
<-----------------
AG
attttcgaaatcagtatcctgaaaatggaaaatgtaagtgatagaactagtctcctttttaggaagggtctcttctcaaatttggttatatgattcaaac
23085500
<---------
YAB1
--------->
ATHB12
--------->
ATHB51
<---------
ICU4
<---------
YAB1
--------->
ICU4
----------->
GT1
--------->
YAB1
--------->
YAB1
<---------
ANAC46
--------->
WOX13(1)
<---------
GLK1(1)
<----------
DOF2
<-----------
GT1
gatgggctcaactagtaaactttgtcattcagagttgtttcgaaatacttgaaatctctcattattgttctcttttttcgtaaatttttcaaactatttc
23085600
--------->
DAG2
---------->
DOF2
--------------->
AGL15
<---------------
AGL15
------->
GAMYB
<-----------------
AGL1
<-----------------
AG
---------->
DOF2
<-----------
GT1
--------->
AHL20(2)
--------->
WOX13(1)
--------->
AHL20(2)
----------->
GT1
------->
TEIL
<---------
AHL20(2)
---------->
DOF2
<---------
ANAC46
---------->
DOF2
<---------
ATHB12
-------
gaataaaataaccccaaaagggaagagaaaagaaaccaattgaagtgtataaatagagacccaaaaggaaaatgccaaatgaatcaatctcttaaagaaa
23085700
--------->
ANAC58
<------
MYB83
--------->
ANAC58
--------->
TOE1(3)
<------
MYB46(1)
--------->
ANAC46
<----------
DOF2
------------>
CBF
<--------
P
<-------
TEIL
--------->
TOE2(3)
<-----------
GT1
--->
DOF2
<-------
TEIL
--------->
At4g35610
<----------
DOF2
<----------
DOF2
<---------
AtLEC2
ggagatggtaggggtccatctatgatgtgctcacatacatgctccacgaactcttgtttcttttactttaacttcttcttttttaacaatttgaatgaaa
23085800
--------->
ANAC58
--------->
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
---------
<---------
AHL20(2)
<----------
--------->
AHL20(1)
-----------
*
TSS
--------->
AHL20(2)
<-----------
<-----------
GT1
--------->
ANAC58
<---------
AHL20(1)
------------
<---------
AHL20(2)
--------->
ANAC58
--------->
AHL20(2)
--------->
ANAC58
------------
<-----------
TBP
<---------
YAB1
<---------
GLK1(2)
---------->
DOF2
------>
NtERF2
catatttatacatcttatctatgactatgactcg
cacatattttctcagaattttatttattttattgaaagccaatctctctcatttgcgcctataaat
23085900
------->
GAMYB
-------->
P
>
AHL20(2)
--------->
ANAC46
-----
AGL15
--------->
ANAC58
---->
AGL15
--------->
ANAC58
------
AGL3
---------->
DOF2
--------->
ANAC46
----->
AGL3
--------->
ANAC46
<---------
MYB52(2)
---------->
DOF2
----
----->
AGL2
<---------
HSFB2a(2)
--------->
WOX13(1)
----------->
GT1
<----------
DOF2
--------
agcaaccctctctcattctacaagtctcacatcaaagcaattaacaaatacacaacttgtaacttcaaatagattactttcaaagaagagagagagaaag
23086000
<---------
ANAC58
<---------
ZAT18
<---------
ANAC58
<---------
HSFB2a(2)
------>
MYB83
------->
TEIL
--------->
HSFB2a(2)
------>
MYB46(1)
<---------
ATHB12
------>
DOF2
<---------
HSFC1(2)
<---------
MYB59
<---------
ATHB12
-->
DOF2
--------->
HSFC1(2)
--------->
AtMYB61
--------->
WOX13(1)
-
aaag
atggagaagaacatgaagtttccagtagtagacttgtccaagctcaatggggaagagagagaccaaaccatggctctaatcaatgaagcttgtgag
23086100
<---------
ARR11(3)
<-------
TEIL
<--------
P
<---------
TOE2(3)
--------------->
AGL15
<---------
ARR11(3)
<---------------
AGL15
--------->
ANAC46
<-----------------
AGL2
--------------->
AtSPL3
<-----------------
AGL3
<---------------
AtSPL8
--------->
STY1(2)
<---------
TOE1(3)
--------------->
AtSPL8
--------->
CCA1(2)
<---------
AtMYB61
<---------
TOE2(3)
<---------
YAB1
<---------
ARR11(3)
--------->
DAG2
<----------
DOF2
--------->
ARR11(3)
--------->
ARR11(1)
<--------
P
------>
ZmHOX2a(2)
<----------
DOF2
<-------
TEIL
<---------
AHL20(2)
>>>>>>>>>>
WRKY63
<---------
ZAT6
<----------
DOF2
-------->
ALFIN1
<-------
TEIL
--------->
YAB1
----------->
ARR10
<---------
ARR11(3)
--------->
ARR11(3)
aattggggcttctttgag
gtacatacacaatatctaacatattattgtttgaaaagatttgactatagctagctcttagtggtaaggttgatcttttgtt
23086200
---------->
DOF2
<----------
ID1
--------->
AtLEC2
<---------
HSFB2a(2)
--------->
ANAC58
--------->
HSFB2a(2)
--------->
ANAC58
========================
HOX2a_HOX2a
<------
ZmHOX2a(2)
--------->
ANAC58
<---------
ARR11(3)
--------->
ANAC46
<---------
ZAT18
--------->
MYB52(1)
--------->
At4g35610
--------->
ANAC58
--------->
ZAT18
--------->
O2
--------->
ARR11(3)
<------
ZmHOX2a(1)
------
aatttcatttttcag
atagtgaaccatggattaccacatgacttaatggacaagatcgagaagatgacaaaggaccattacaagacatgccaagaacaaa
23086300
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AGI:
At1g62380.1
Description:
ACO2 (ACC OXIDASE 2). similar to 1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative [Arabidopsis thaliana] (TAIR:AT1G12010.1); similar to ACC oxidase [Brassica oleracea] (GB:CAA57284.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123)
Range:
from: 23085835
to: 23087918
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.