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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ZAT18
--------->
ZAT18
--------->
ZAT14
---
<---------
ZAT14
---
--------->
ANAC58
<---------
ZAT6
<---------
ALFIN1
<---------
ZAT18
--------->
ANAC58
<---------
ZAT14
<---------
ARR11(3)
--------->
ZAT18
---
WOX13(1)
<---------
ANAC46
--------->
ANAC58
---------->
DOF2
---
>
ATHB12
<---------
ANAC46
--------->
ANAC58
<-----------
HVH21
------->
TEIL
aagcatgagaagccatgaaatagatggagcgtagagatagttcactccgatatagtgcaagaactcttccttcaccttgtcaaagaagaaaatgcacttc
23011900
--------->
ANAC46
--------->
MYB52(1)
--------->
ANAC58
------>
ANAC58
--------->
ANAC58
------>
ANAC58
<---------
ZAT6
--------->
SPL7
--------->
At4g35610
-
------>
ANAC46
----------->
HVH21
--------->
CCA1(2)
<---------
At4g35610
<--
aaggcatacaaaaaacagagtgacacttgtgttacaagtgctaagtaccacaagagatggaacgccatagatgggagtttgctgtgcatatgagacatgc
23012000
<---------
ICU4
<--------
HAHB4
--------->
ANAC58
<---------
YAB1
--------->
ANAC58
<---------
ATHB12
<---------
ANAC58
--------->
ALFIN1
--------->
ICU4
<---------
ANAC58
<-------
MYC3
<------
ZmHOX2a(2)
<---------
ARR11(3)
------->
MYC3
<------
NtERF2
--------->
ANAC46
--------->
O2
------>
NtERF2
--------->
LBD16
<---------
O2
<-----------
RAV1(2)
----------->
RAV1(1)
<---------
ANAC46
================================
RAV
------>
ZmHOX2a(1)
--------->
ANAC46
----------->
HVH21
--------->
ARR11(3)
---------->
DOF2
--------->
LBD16
--------->
REM1(2)
-------->
At5g28300
<---------
ARR11(3)
<------
NtERF2
<---------
ANAC58
<------
NtERF2
------
-------
DEAR3(1)
--------->
YAB1
--------->
ARR11(3)
<---------
ANAC58
<---------
LBD16
---------->
DOF2
tcggtgactcaggcgcgatcattatcttccacagaagagcttggctgcaaagagagaggcttatcctgaaatagcccgcgtggagactacgcaaagcgga
23012100
<----
------
<---------
At4g35610
<---------
LBD16
--------->
At4g35610
<-----------
GT1
<---------
ANAC58
--------->
ZAT2
<----------
DOF2
<---------
ANAC58
--------->
MYB52(1)
<-----------
GT1
--------->
ARR11(3)
>
NtERF2
<---------
ZAT2
<-----------
GT1
------->
TEIL
<-------
catcaagacaacgggtttagcatcagctaggccagttttaaactctttactactcggtattgagttatcgatttcgatatgaatttcttgcctcggaatt
23012200
<---------
TOE2(3)
<----------
DOF2
<----------
DOF2
<------
ZmHOX2a(1)
<---------
ANAC46
<---------
YAB1
<---------
ANAC58
--------->
TOE1(3)
-------
GT1
<---------
ANAC58
*
TSS
--------->
TOE2(3)
<-----------
TBP
--->
GLK1(1)
--------->
DAG2
---------->
ID1
------>
ZmHOX2a(1)
----------->
GT1
-
--
GLK1(2)
---------->
DOF2
--------->
ATHB12
<---------
MYB59
<---------
ZAT6
---
tccat
cttggtttatcgatgaaaaagaggtattggcttgtttggctctat
ggtttcctaaccttaggatagagttagtatatataagtagagaaattata
23012300
<-------
MYC3
------->
MYC3
<-------
MYC2
--------->
ANAC55(2)
--------->
ANAC55(1)
--------->
ANAC58
<---------
ANAC55(2)
--------->
TGA1a
--------->
O2
<---------
O2
<---------
TGA1a
--------->
DAG2
--------->
ANAC58
--------->
MYB111(1)
--------------->
AGL15
============================
MYC_MYB
<---------------
AGL15
<---------
ICU4
--------->
MYB59
--------->
YAB1
===========================
<---------------
AtSPL8
--------->
MYB52(2)
----------------->
AGL3
--------->
ICU4
------->
MYC2
--------->
MYB111(2)
----------------->
AGL2
--------->
AHL20(2)
------------>
MYB.PH3(2)
<---------
MYB59
--------->
ICU4
<---------
AHL20(2)
<----------
DOF2
<---------
ZAT6
<---------
ANAC55(2)
-------->
MYB52(1)
--------->
ANAC46
--------->
MYB46(2)
--------->
YAB1
---------->
DOF2
------>
ARR11(3)
================
bZIP_DOF
<-----------
RAV1(1)
--------->
TOE2(3)
<---------
GLK1(2)
gataatggagattaattagtacaaaacacgtgatttagggggagttagttagtgttggacaaaaatgatacctaaaaccaaaagtagtaatggaatctca
23012400
<----------
DOF2
<---------
DAG2
--------->
TOE2(3)
<---------
ANAC46
<---------------
AGL15
--------->
ANAC55(2)
<-----------
GT1
<---------
ANAC55(2)
--------->
CCA1(2)
--------->
SPL7
<---------
ANAC58
---
<------
ZmHOX2a(1)
<---------------
AtSPL3
----------->
GT1
------
----------->
GT1
<--------
P
<---------------
AtSPL8
<---------
TOE2(3)
------
<---------
TOE2(3)
<----------
DOF2
--------------->
AtSPL3
<---------
TOE1(3)
------
==========================
MADS_MADS
<---------
ARR11(3)
<---------
ANAC58
--------->
AHL20(2)
aaataaggatataacctttttagtaacttttggtaagttcaataacttatacagtacgtctcaacatgtcttgtttaagcttgaaaaaaatacacacaca
23012500
--------->
YAB1
--------------->
AtSPL8
<---------------
AtSPL8
--------->
MYB52(1)
------>
MYB83
--------->
ICU4
------>
MYB46(1)
<------
MYB83
<---------
MYB59
<---------
YAB1
--------->
ATHB12
<---------
MYB111(1)
<------
ZmHOX2a(1)
<---------
MYB46(2)
<---------
AHL20(2)
<----------
DOF2
--------->
AHL20(2)
<------
MYB46(1)
------->
DOF2
<---------
AHL20(2)
<---------
DAG2
<---------
AHL20(1)
--------->
MYB59
--->
ANAC46
<----------
DOF2
<---------
ANAC58
<---------
AHL20(2)
<---------
TOE2(3)
--->
ANAC58
<---------
DAG2
<---------
ANAC58
--------->
YAB1
<---------
YAB1
-
--->
ANAC58
--------->
ATHB12
<<<<<<<<<
GATA-1
--------->
ANAC55(2)
--------->
AHL20(2)
<-
caaagtcattccaattgattactttacgaattaatcttttatctattgcctgctttacctaactagtacattataattaaacaggattattaggttttct
23012600
--------->
TOE2(3)
------>
MYB83
------>
MYB46(1)
--------->
MYB46(3)
--------->
PCF2
--------->
DEAR3(1)
----------->
HVH21
<-----------
GT1
--------->
MYB46(3)
---
<---------
ARR11(3)
<------
NtERF2
XXXXXXXXXXXXXXXXXXXX>
MIR868
<---
--------->
ARR11(3)
<---------
At4g35610
<<<<
-------->
YAB1
--------->
At4g35610
<---------
YAB1
<<<<
--------
YAB1
--------->
ZAT6
--------->
ATERF1(1)
--------->
YAB1
----------->
GT1
------
tatcataagatgttaccactatctctgatggcagcgacccactaaattcttaaatacttataattttctctaagaaaaattcgaaaaattagataaacaa
23012700
<---------
PCF2
<-----------
HVH21
<------
MYB83
<------
MYB46(1)
<---------
MYB46(3)
<---------
ALFIN1
------>
YAB1
--------->
ALFIN1
--------->
MYB46(3)
------
ATHB12
--------->
GLK1(2)
<-----------
GT1
<---------
ZAT18
--------->
At4g35610
<<<<<
ARR2
--------->
ARR11(3)
--------->
ARR14(2)
--------->
ANAC58
<---------
At4g35610
<<<<<
ARR1
<---------
ARR11(3)
<---------
ARR14(2)
--------->
ANAC58
<---------
KAN4(2)
--->
WOX13(1)
<---------
TOE2(3)
--------->
ANAC55(2)
---------->
DOF2
<------
ZmHOX2a(1)
tcatattgtcgaaataagataatccagtgggtcacagacgtattcaccacctattcatcgaggtcaaaagccagtgccttagctcgaggaataagctcac
23012800
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AGI:
At1g62280.1
Description:
SLAH1 (SLAC1 HOMOLOGUE 1); transporter. similar to SLAH4 (SLAC1 HOMOLOGUE 4) [Arabidopsis thaliana] (TAIR:AT1G62262.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69647.1); contains InterPro domain C4-dicarboxylate transporter/malic acid transport protein; (InterPro:IPR004695)
Range:
from: 23010812
to: 23012250
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.