Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                     <---------AHL20(2)
                     --------->AHL20(2)                       <---------AHL20(2)
                    <---------AHL20(1)                        --------->AHL20(2)
                    <---------AHL20(2)                       <---------AHL20(2)
                    --------->AHL20(2)                 --------->ANAC46
               <---------YAB1                       <---------At5g28300
              <-----------GT1                      <-----------GT1
         <---------TOE2(3)                    <---------AHL20(2)                      --------->TOE2(2)
         <---------YAB1                       --------->AHL20(2)  <---------AHL20(2)  --------->TOE1(2)
------>DOF2 <---------YAB1                   --------->AHL20(2)  --------->YAB1      --------->YAB1
 
aaagagtcgattaatattatcaatttaattttagataagaagactatatttaatttacccctaatttatattaatctccaatttccaaacatatgagaat  22896400
                                                          --------->AHL20(2)
                                                          <---------AHL20(2)
                                                         --------->AHL20(2)
                                     <---------YAB1      <---------AHL20(2)
                                 <---------AHL20(2)   --------->AHL20(2)
                            <---------AHL20(2)        --------->AHL20(1)
                            --------->AHL20(2)        <---------AHL20(2)
                           --------->AHL20(2)        <---------AHL20(2)
                       --------->AHL20(1)            --------->AHL20(2)            --------->YAB1
                       --------->ARR11(3)           <---------AHL20(1)           <---------KAN4(2)
                       <---------AHL20(1)          --------->YAB1             ----------->GT1
                 ---------->DOF2<---------ICU4   --------->AHL20(2)           <---------ANAC46
       --------->TOE2(3)<---------AHL20(2)   ----------->GT1             <---------ANAC58
       --------->YAB1  <---------ARR11(3)    <---------ZAT6              <---------ANAC46
   <---------AHL20(2) --------->CCA1(2)    <---------ANAC58              <---------ANAC58
   --------->AHL20(2)--------->ARR11(3)    <---------ANAC58              <---------ANAC55(2)
  <---------ATHB12   <---------ARR11(3)    <---------ANAC46              --------->ANAC55(2)
 
ttccaattaatcttattttgtaaagatatatttaatttttatgaattcgtgttaaaataatttaaaaacgatacttacgtagagtataatcaagttggaa  22896500
                              --------->AHL20(2)
                           <---------AHL20(2)
                         --------->ICU4
              <---------ARR11(3)
             <------ZmHOX2a(1)<---------AHL20(2)
          --------->YAB1 <---------YAB1        <-----------GT1
   ------>ZmHOX2a(1)  <---------YAB1 <---------------AGL15         <------ZmHOX2a(2)
  --------->TOE2(3)  <------------------------ANAC81              <---------ARR11(3)
 <---------ICU4<---------RVE1(1) <-----------GT1                  --------->ARR11(3)              --
 
taaatccttactatcaggattttttgttattattttattccattttttagttactggatgtgactataagatcatccaagaatacaaatgtttttttggg  22896600
                                                                                                  --
                                                                                             <------
                                                                                        --------->AHL20(2)
                               <---------AHL20(2)         ----------->GT1               <---------AHL20(2)
                              <---------YAB1 ------>ZmHOX2a(1)                          --------->AHL20(1)
                            --------->YAB1   <----------DOF2                            <---------AHL20(1)
<----------ID1      --------->ZAT6       <---------ARR14(2)                            --------->AHL20(2)
-------->DOF2     <-----------GT1        --------->ARR14(2)                            <---------AHL20(2)
 
aaaaagacaaaatttgggttctaactctccataataaatgtaagtatccttttgtaagaaatggataatataggtgtcaaatttgaataattttattttc  22896700
                                                                                     --------->AHL20(2)
                                                                                 <---------AHL20(2)
                                                                                <---------WOX13(1)
                                                                              <--------ATHB1
                                                                              <---------ICU4
                                                                              -------->HAHB4
                                                                              --------->ATHB12
                                                                              --------->ATHB51
                                                                             <---------ATHB12
                                                                             <---------YAB1
                                                                     <---------ARR11(3)
                                                                 *TSS--------->ARR11(3)
                           ----------->TBP                   ---------->DOF2 <---------ATHB51
                    <---------At4g35610                   --------->TOE1(3)  --------->ICU4
------->ATHB12 <---------ZAT14 <-----------GT1            --------->TOE2(3)--------->YAB1         --
-----GT1       <---------REM1(2)     ------>ZmHOX2a(1)  ------->TEIL --------->GLK1(2)        <-----
 
ttcatttgtactcttgtcttcacagatgctatatatactcctccatttctctcggtgtgaaccttatagcaaaatctctaataattgattatatgaatta  22896800
                                                                                      --------->DAG2
                                                                                    ---------->DOF2
                                        <---------AHL20(2)                   <---------ANAC58
           ----------->GT1             <---------AHL20(2)                    <---------AtLEC2      <
           --------->YAB1    --------->WOX13(1)                         <---------MYB46(3)        <-
       <---------AHL20(2)   <---------AHL20(2)       <---------TOE2(3)  <---------REM1(1)         --
      --------->AHL20(2)    --------->AHL20(2)      ---------->DOF2     <-----------RAV1(1)      ---
--------->GT1    --------->AHL20(2)    --------->AHL20(2)            <---------MYB46(3)     --------
----AHL20(2)     <---------AHL20(2)   <---------WOX13(1)     ----------->GT1 <---------ANAC58   ----
 
atggttaaattttatagtaattaaacttgaattaatcagtgattaatttagagattaaagaagagggtgaagttgttgttgcatggcaaaaggtcgaaag  22896900
                                                                  --------->DOF5.7(2)
                                                            <---------HSFC1(2)
                                                            --------->HSFB2a(1)
                                                            --------->HSFC1(2)
                                                          <---------ARR14(2)
                                                          <---------GLK1(2)
                                                          --------->ARR14(2)
                                                       --------->ANAC58
                                                       --------->ANAC46
                                              ----------->HVH21   <---------MYB52(1)
          <---------LBD16                 <---------At5g28300    <-----------HVH21
 ------>NtERF2                           --------->MYB52(1) <---------HSFB2a(1)
<---------ETT(2)                     <---------ALFIN1  --------->ANAC55(2)
------NtERF2                     <---------At4g35610   <---------ANAC55(2)
--------ATERF1(1)                --------->At4g35610   --------->ANAC55(1)           <---------DEAR3(1)
---->NtERF2 --------->LBD16     --------->ANAC58       --------->ANAC58           <---------ZAT2
------>DEAR3(1)                 --------->ANAC58   <-----------HVH21<---------DOF5.7(2)
-->DOF2  ------->TEIL     --------->TOE1(2)  --------->At5g28300 <-------GAMYB    --------->ZAT2   <
----->DEAR3(2)     <------ZmHOX2a(2) --------->REM1(1)<---------LBD16--------->DEAR3(2)     <------ZmHOX2a(1)
 
ccgacgacaatgaaccggagcgatcgataccttggaagctacacttacggtgacagtcacggaaactccgttaccgacgaattagagctcggtgaggaag  22897000
                                                          --------->ALFIN1
                                                         ------->MYC2                          -----
                                                         ------->MYC3                         <-----
                                                         <-------PIF4                         ------
                                                         ------->PIF5                         <-----
                                                         <-------MYC4                         ------
                                                         ------->PIF4                         ------
                                                         ------->MYC4                         <-----
                --------->WOX13(1)                       <-------MYC3                        -------
              <---------MYB52(1)                         <-------PIF5                        <------
              <------NtERF2                              <-------MYC2                        <------
             <-----------HVH21<---------ALFIN1          <---------TGA1a                      =======
             <---------RAP2.6(3)                        <---------O2                         =======
            --------->RAP2.6(2)                         --------->TGA1a                      <------NtERF2
           --------->SPL7     --------->AtMYB61         --------->O2                         -------
        --------->DEAR3(1)    --------->DEAR3(1)        <---------ANAC46                     <------
        --------->MYB46(3)   <---------ABI4(2)     --------->ANAC46                          =======
       --------->DEAR3(2)------>NtERF2             --------->ANAC58                          =======
       --------->At4g35610   --------->MYB46(3)    --------->ANAC58                          <------
       <---------At4g35610  ------>NtERF2         --------->SPL7                             =======
       --------->ATERF1(1) --------->ANAC46      ------>ZmHOX2a(1)   --------->ANAC46       ------>NtERF2
     <---------WRKY12   --------->ANAC46        --------->TOE1(2)    --------->ANAC58      <--------
     <---------WRKY38(1)--------->bZIP60(1)     --------->TOE2(2)    --------->ANAC58      <--------
   <-----------HVH21    <---------bZIP60(1) --------->GLK1(1)      <---------ANAC58        <--------
---------At4g35610   --------->ANAC46      <------ZmHOX2a(1)       <---------ANAC58  --------->MYB52(1)
 
acatctggtcaccggccgtcattcacgacgacaccaccgagaatgaggaatcctacggcacgtggaacttacgcgctaccttgggaaaaaacgggcgcgt  22897100
    <-----------RAV1(1)                   <------NtERF2
  <---------ARR14(2)                      --------->ATERF1(1)
  --------->ARR14(2)                    --------->RRTF1(3)
 <------ZmHOX2a(1)                      --------->RAP2.3(2)
---->ALFIN1                             --------->DEAR3(1)
--MYC3                                  --------->RAP2.3(3)
->MYC3                                 --------->RAP2.3(1)
--MYC2                                <---------ATERF1(1)
->MYC2                                --------->LBD16
->PIF5                                ------>NtERF2
--PIF5                    <----------DOF2------>NtERF2                            <------ZmHOX2a(1)
-->ALFIN1                 --------------------->WRI1                            --------->ALFIN1
---ANAC58             --------->ZAT18--------->DEAR3(1)                     <---------LBD16
---ANAC46             <---------ZAT18<---------ALFIN1                     --------->ANAC46
=========================bZIP_DOF   <---------LBD16                      <---------At5g28300
======================================MYC_MYB                            <---------LBD16
-->TGA1a      <----------DOF2  <--------P<---------ATERF1(1)         <---------ARR14(2)
---TGA1a     <---------ANAC58 <---------ANAC58                   <---------At4g35610  --------->ALFIN1
========================================MYC_MYB               --------->ZAT18  <------NtERF2
===================================bZIP_DOF                   <---------ZAT14  --------->ATERF1(1)
---ANAC58    <---------ANAC58 <---------ANAC58                --------->ZAT14<---------DEAR3(1)
=====================================bZIP_DOF           --------->YAB1 <-------TEIL--------->ALFIN1
-ANAC58    ------>NtERF2<----------DOF2--------->ATERF1(1)    <---------ZAT18<---------ANAC46
-ANAC58  --------->ATERF1(1)  <-------GAMYB            <---------YAB1--------->ARR14(2)
-ANAC46 <---------At4g35610  <---------MYB46(3)     --------->DEAR3(1)--------->CCA1(2)         <---
 
gggaggattgtcgctggctttcgagggctctttggttgctccgccgtcgtcttcgccgatgatagtgcagaagattcacggcggaggaggtgagggagag  22897200
                                     --------->MYB52(1)
                                     ------->TEIL
                            --------->LBD16
                           --------->ATERF1(2)
                           <---------ATERF1(2)
                          --------->RAP2.3(1)
                          --------->ATERF1(1)
                          <------NtERF2
                         <---------ATERF1(1)
                         <---------RRTF1(1)
                         ------>NtERF2
                         <---------RAP2.3(1)
                         <---------RAP2.6(1)
                         <---------ERF1
                        <---------RAP2.3(2)
                        --------->DEAR3(1)
                        <---------DEAR3(1)
                       --------->ATERF1(1)
                       --------->RAP2.3(1)
               <---------RAP2.6(2) <---------SPL7
               <---------ANAC58  --------------->AtSPL3
               <---------ANAC58  <---------------AtSPL3         --------->WRKY38(1)
   ----------->GT1    <---------RAP2.3(1)                       --------->WRKY12
   --------->LBD16    <---------ATERF1(1)             --------->CCA1(2)
 <---------LBD16 <------NtERF2  <---------DOF5.7(2)  --------->ARR11(3) <---------MYB52(1)
--------->MYB52(1)   <---------DEAR3(1)      <---------ZAT14    ----------->HVH21
---ZmHOX2a(1)  <---------ANAC46<---------WRKY12      <---------ARR11(3)<-------GAMYB          <-----
 
gaagaccggagaaaattggcgtcttcggcgccggtaaacgtaccggactggagtaagatataccgagttgactcggttgagtcaatacacgagttagacg  22897300
<- Previous    Next ->

AGI:  At1g61930.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G11700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17934.1); contains InterPro domain Protein of unknown function DUF584 (InterPro:IPR007608)
Range:  from: 22896766    to: 22897641    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.