Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <---------HSFB2a(2)                           <---------HSFC1(1)                                             --------->TOE2(3)                           --------->HSFB2a(2)                ----------->RAV1(1)  <------ZmHOX2a(1)       --------->At4g35610 --------->HSFC1(1)                --------->MYB46(3)   <----------ID1 -------->ANAC46     <---------GLK1(2)                 <------ZmHOX2a(1)   --------->ANAC46 ---HVH21   <---------CCA1(2)               ----------->RAV1(1)       --------->YAB1    <-----------ARR10   acacacagtagctcaaatctcttgattctctagaaatttgccactgcaacaaaatcaggaacaacaacacaatgaacacaaaacaggacaaatctcaact  22494700                                                                                                <----                                                                                                -----                                                                                             <-------                                  <----------DOF2                                     ------>MYB83                                --------->At4g35610                                   ------>MYB46(1)                      ---------->DOF2                                               <---------MYB59 -                     --------->AtMYB61           <---------WOX13(1)                --------->ANAC58 =          --------->AtMYB61     <---------At4g35610                    --------->AHL20(2)<----------DOF2     <---------MYB52(2)    <----------DOF2 ------->TEIL  <-----------GT1           --------->ANAC58--   ctttgaaacaaaccaaaacagaaccaaagctttcagctttctatgaaactaattgaattttacaaaacccaaaaaaaattcaagaacccaactttaagaa  22494800                                                        <---------AHL20(2)                                                        --------->AHL20(1)                                                        <---------AHL20(1)                                                        --------->AHL20(2)            <------ZmHOX2a(2)                          --------->AHL20(2)   <---------At4g35610                                 <---------AHL20(2)                         --- -----ARR14(2)                                     --------->AHL20(2)                             --- ---->GLK1(2)  ---------->DOF2                  <---------ICU4                                   <--- --TOE2(3) --------->AGP1                       --------->YAB1                      ---------->DOF2-- ----->ZmHOX2a(1)                              <---------ATHB12        --------->ICU4          ------ ==================HOX2a_HOX2a                 --------->ICU4     --------->ANAC58 <---------AHL20(2) ------->TOE2(3)    ----------->GT1          --------->YAB1       --------->ANAC58 --------->AHL20(2)   tcctaagcagatagatccaaagatgtgaaattgagagataaacacactaataatcaaataaatttgacaagaaatgtttgaagaattaaagagagagaaa  22494900       --------->ARR14(2)       <---------ARR14(2)                                                                    <-------     <---------MYB46(3)                                                                      <-------     --------->ABI4(2)                                                                --------->ANAC58     --------->MYB55(2)      ------->GAMYB                                            --------->ANAC58    --------->ALFIN1      ----------->RAV1(1)                                     <---------ANAC55(2) <---------DEAR3(1)     --------->At4g35610                                       --------->ANAC46 <---------DREB2C(2)    <---------At4g35610        <------ZmHOX2a(2)              --------->ANAC55(1) -------->TGA1       --------->ZAT14           --------->YAB1                     --------->ANAC58 -------->HVH21      --------->At4g35610 --------->ANAC58                         --------->ANAC58 ------MYB52(2)      <---------ZAT14   ---------->DOF2         ----------->RAV1(1)--------->ANAC55(2) ------->MYB52(1)    <---------At4g35610 --------->ANAC58 --------->ANAC58       <---------LBD16 --->GLK1(2)  <---------MYB52(1)     --------->AtMYB61    --------->ANAC58      <---------ALFIN1-----   ctgacggtggttcttcgttgctctgcagcaacagcaagaccaaaagcaatgagatcaaacacgaacaccagaagaagtagcaacacggaagccatagctg  22495000                                                                                             ------>NtERF2                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                               --------->HSFB2a(2)                                                                               <---------HSFB2a(2)          ----------->RAV1(1)                      <<<<<<<<<TBF1              <---------LBD16<-------       --------->ANAC46             <-----------ARR10       <<<<<<<<<TBF1     --------------------->WRI1       --------->ANAC58             --------->GLK1(2)    <<<<<<<<<TBF1   <---------------AGL15  ----- --At4g35610                       <---------GLK1(2)  <<<<<<<<<TBF1     <-----------------AGL2<------NtERF2 --ZAT2--------->ANAC58 --------->TOE1(3)       <<<<<<<<<TBF1      --------->ZAT6           --------- ---->At4g35610         --------->TOE2(3)   ------>ZmHOX2a(1)   --------->ANAC46           --------->RAP2.3(1)   ctcaattcgaagcaacacaaacaaaaccctaaactcagaatctctccttcttcttcttcttcttcttcgacactactgtttctggataatatcgccgacg  22495100                                                                  <---------AHL20(2)                                                                 --------->AHL20(2)                                                                 <---------AHL20(2)                                                                <---------YAB1                                                          ------->MYC4                                                          <-------MYC2                                                          <-------MYC4                                                          <-------MYC3                                                          ------->MYC3                                                          ------->MYC2                                                         <--------ABF1                                                         ============================================                                                         --------->TGA1a   ----------->GT1                <------ZmHOX2a(1)      <---------O2--------->AHL20(2) -->HVH21                   =======================================bZIP_DOF                <--------- -DEAR3(1)                  ---------->DOF2              --------->O2<---------AHL20(2)    <---------DAG2 >At1g77200                <------ZmHOX2a(1)             <---------TGA1a                --------->ANAC58 --ATERF1(1)              *TSS   ----------->GT1         <---------ANAC55(2)            --------->ANAC58 ->NtERF2                <---------TOE2(3)               --------->ANAC55(2)           <---------TOE1(2) >DEAR3(1)               <---------TOE1(3)           <------ZmHOX2a(1)       <-----------GT1   <-----   cgaagaagtcaaaaaacatactgtgctaaggaaagaggaaacttgtgaacgaagaggacacgtgttattaattttttgttttccattcgcacgcttttta  22495200                                                                           --------->WOX13(1)                                                                       ----------->GT1                                                                       <------MYB46(1)                               --------->ATHB12                        <------MYB83                               <---------ICU4                <---------AHL20(1)                              <---------YAB1                 --------->AHL20(2)                              --------->ICU4                 --------->AHL20(1)             <--------    <----------DOF2  <---------AHL20(2)                     --------->AHL20(2)            <---------ZAT18 =bZIP_DOF           <---------YAB1              <---------YAB1   <---------AHL20(2)      --------->ZAT18 -DOF2   ---------->ID1<---------AHL20(2)      --------->YAB1<---------AHL20(2)   <----------DOF2 ------GT1 <----------DOF2 <---------YAB1     --------->ICU4<---------AHL20(2)    <---------DAG2 <---   catgctcttttgtcttttcgaatattattttgattattgctaaatgaaattataagagataattttatttagttggtaaatcaacttttttgtgctctag  22495300                                            ----------->GT1                                          <---------LBD16                                  --------->YAB1                <---------MYB52(1)                               --------->MYB52(1)             --------->ATHB12  --------->ANAC58          <---------At4g35610             <<<<<<<<<<<<<<<<<LFY  ----------->GT1    <----------DOF2 --------->YAB1--------->ARR11(3)                          ------  --------->ANAC58   <---------DAG2  --------->AHL20(2)     >>>>>>>>>>>>>>>>>LFY               ------ --DOF2           <-----------GT1--------->ZAT6    <---------ARR11(3)     ---------->DOF2      ------ ------ZAT6<-----------GT1  --------->At4g35610 --------->AHL20(2)<---------MYB46(3)      <---------YAB1   tggtaagaaaaattcactataaacttttttagctaacaataatatcgggataaaatctcatggaccattggttattcaaagaaaaatgcgatattataca  22495400                       <---------ANAC58                       --------->ANAC55(2)                       <---------ANAC55(2)       <---------AHL20(2) --------->SPL7                --------->YAB1 <---------ICU4        <---------ANAC46             --------->DAG2                  --------->ZAT18 --------->YAB1        <---------ANAC58       <---------ANAC55(2)       ----------->GT1 --->ANAC46 --------->AHL20(2)               <-----------------------TaNAC69(2)   --------->ANAC46 --->ANAC55(2)        <-------TEIL           <-------TEIL      --------->CCA1(2)---------->DOF2    -- --->YAB1   <---------AHL20(2)      <---------YAB1 ---------->DOF2      --------->YAB1          <----   taatcatgttttatttatattggatgcgtaagtccaatctaattggatacataaaaagtcataagatttgaaaatggtaactaaaaggcactattgttta  22495500                                                        <---------YAB1                                                     <---------YAB1                                                <------ZmHOX2a(2)                                                <---------GLK1(1)                                                --------->GLK1(1)                                               --------->ARR11(3)                                               <---------ARR14(2)                                               --------->ARR14(2)                                               <---------ARR11(3)                        ---------->DOF2                           ---------->DOF2     <---------AGP1                        --------->YAB1                      --------->ANAC58        <---------CCA1(2)                      <------ZmHOX2a(1)                      --------->ANAC58  <---------ARR11(3)                     --------->ARR11(3)    <--------P        --------->ANAC46  --------->ARR11(3)                     <---------ARR11(3) ------->TOE2(3) --------->At4g35610---------->DOF2  ------>ZmHOX2a(1)        --------->GLK1(1) -------GT1   ---------->DOF2     <----------DOF2------>ZmHOX2a(2)       --------->MYB52(1)   accttggtagataatcgaaagctcaagccaaaagggcttaaagattttagatctccttattgttgtttcaagggcaaacgatatctaggataaaagtcag  22495600  Previous    Next  AGI:  At1g61065.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27435.1); similar to unknown [Populus trichocarpa] (GB:ABK92609.1); contains InterPro domain Protein of unknown function DUF1218 (InterPro:IPR009606) Range:  from: 22493909    to: 22495126    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g61070.1    Description:  LCR66/PDF2.4 (Low-molecular-weight cysteine-rich 66). Identical to Low-molecular-weight cysteine-rich protein LCR66 precursor (LCR66) [Arabidopsis Thaliana] (GB:Q9C947;GB:Q1PFI2); similar to LCR68/PDF2.3 (Low-molecular-weight cysteine-rich 68), protease inhibitor [Arabidopsis thaliana] (TAIR:AT2G02130.1); similar to LCR69/PDF2.2 (Low-molecular-weight cysteine-rich 69), protease inhibitor [Arabidopsis thaliana] (TAIR:AT2G02100.1); similar to protease inhibitor II (GB:AAA91049.1); contains InterPro domain Gamma Purothionin; (InterPro:IPR008177); contains InterPro domain Gamma thionin; (InterPro:IPR008176); contains InterPro domain Knottin; (Int Range:  from: 22495398    to: 22496207    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.