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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
--------->
ANAC58
--------->
ANAC58
--------->
TOE1(3)
--------->
ANAC58
--------->
GLK1(1)
--------->
ANAC58
--------->
TOE2(3)
<---------
ATHB12
--------->
YAB1
--------->
MYB52(1)
----
tcttaaaaccttcataacct
ctgaaaacaaatcaaacgctaatttaatcagaaacccattacaagaacacaaacagacacaagctaaacaaaaacaaata
22099800
<------
NtERF2
<---------
DEAR3(1)
--------->
ETT(1)
<------
MYB46(1)
<------
MYB83
<---------
MYB46(3)
<---------
AtMYB61
<---------
MYB52(1)
--------->
GLK1(2)
<---------
WRKY18(1)
<-------
GAMYB
--------->
YAB1
<---------
GLK1(2)
------->
TEIL
--------->
ZAT14
<---------
ICU4
<---------
ARR11(3)
<---------
ANAC46
--------->
MYB46(3)
--------->
ANAC58
--------->
ARR14(2)
--------->
ANAC46
----->
CCA1(2)
<---------
ZAT14
--------->
ANAC58
<---------
ARR14(2)
<-----------
HVH21
<-----
tacaagaacaaac
cttgtgaagtgatgagacgataagcatgaccaagtacaagattctccgttggtcggagaagtttcacgcgcgtgaacctcacaacct
22099900
--------->
KAN4(2)
<----------
TaMYB80
--------->
HSFB2a(1)
<---------
HSFB2a(1)
<---------
KAN4(1)
--------->
KAN4(1)
---------->
TaMYB80
<------
NtERF2
--------->
LBD16
=
<------
NtERF2
---
<---------
LBD16
---------
------>
NtERF2
--------->
YAB1
---------
<---------
RAP2.3(1)
---------->
DOF2
---------
--------->
ETT(2)
------>
NtERF2
<-------
TEIL
-
<---------
DEAR3(1)
<---------
ETT(1)
--------->
ARR14(2)
<-----------
HVH21
--------->
ANAC46
<---------
ARR14(2)
<-----------
RAV1(1)
<---------
LBD16
<------
ZmHOX2a(1)
<---------
MYB46(3)
<---------
KAN4(2)
--------->
ICU4
=================
----
DAG2
<-----------
RAV1(1)
--------->
LBD16
--------->
LBD16
----------->
HVH21
<--
ttctctcactcttatcatctgttgttgttgttgtcgccggaatattcttctccggcaaaggaataataagagaaacgtagtgaccaggatacatacgcat
22100000
--------->
LBD16
--------->
RAP2.3(2)
--------->
ATERF1(1)
--------->
RAP2.3(1)
------>
NtERF2
<---------
ATERF1(1)
--------->
At4g35610
--------->
ZAT2
<---------
ZAT2
<---------
At4g35610
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
<-------
TEIL
------>
MYB46(1)
--------->
MYB52(1)
<---------
ARR11(3)
------>
MYB83
<---------
MYB52(2)
--------->
ARR11(3)
--------->
MYB52(1)
=======================
HOX2a_HOX2a
--------->
AtMYB61
------>
ARR11(3)
--------->
At5g28300
<------
ZmHOX2a(1)
------->
GAMYB
----------->
HVH21
>
ANAC58
--------->
CCA1(2)
--------->
YAB1
--------->
DEAR3(2)
------->
GAMYB
>
ANAC46
--------->
ARR14(2)
------>
ZmHOX2a(2)
--------->
MYB46(3)
--------->
MYB46(3)
>
ANAC58
<---------
ARR14(2)
<---------
ARR11(3)
--------->
HSFB2a(2)
-------->
P
----->
ZmHOX2a(2)
==========================
HOX2a_HOX2a
<---------
HSFB2a(2)
--------->
MYB46(3)
======
HOX2a_HOX2a
----------->
GT1
==================
HOX2a_HOX2a
--------->
DEAR3(1)
<-----
-------
ARR11(3)
<------
ZmHOX2a(1)
--------->
ARR11(3)
<---------
REM1(1)
--------->
RAP2.6(2)
<----------
gatctcactaacggatacaggaccgtaatatctatcgatcttgccatcaggatgttgtagaaccaacgcagccgcatcaaccgcttgacaatttcccat
c
22100100
<---------
TOE2(3)
---------->
DOF2
<---------
YAB1
<-----
--------->
ATHB12
---------->
DOF2
--------->
GLK1(2)
<---------
YAB1
<---------
ANAC58
----
CCA1(2)
<---------
GLK1(2)
--------->
ICU4
----------->
GT1
<---------
ANAC46
-
GT1
---------->
DOF2
--------->
AHL20(2)
--------->
MYB52(1)
<---------
ANAC58
tcttacacaaacaaaaagaatctctgttcttcaaaaaaatgttatgattaaagaaaaaaaacagagagtagaatgagagagttgtgtgaaggaaagagga
22100200
--------->
ZAT14
--------->
AtMYB61
<-------
TEIL
*
TSS
<---------
ALFIN1
--------->
TCP16(2)
<---------
ANAC58
-
<---------
ANAC46
--------->
ANAC46
----
--------->
SPL7
--------->
MYB111(1)
<---------
ANAC46
<----
----------->
HVH21
--------->
MYB59
<----------
DOF2
-----
--------->
HSFB2a(2)
<------
MYB46(1)
<---------
ANAC58
<-------
<---------
HSFB2a(2)
<------
MYB83
<---------
ANAC58
--------->
YAB1
<---------
LBD16
--------->
MYB46(2)
<---------
ANAC58
----------
<---------
LBD16
<---------
ZAT6
<---------
ALFIN1
<-----------
-
ZmHOX2a(1)
<----------
DOF2
--------->
REM1(2)
<---------
ZAT14
----------->
GT1
------------>
CBF
agagagaagagaagagtctttttcgggacagcgtgaagagtt
aggtccaccacactggctttgcttataaaacatgtgaaacccaaaaaacaattgttat
22100300
---------->
DOF2
--------->
AHL20(2)
<---------
AHL20(2)
-------->
HAHB4
--------->
AHL20(2)
--------->
AHL20(2)
<------------
CBF
--------->
YAB1
<---------
AHL20(2)
-------->
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
<---------
YAB1
----->
AHL20(2)
--------->
AHL20(2)
<---------
TOE2(3)
<---------
AHL20(1)
-----
YAB1
--------->
YAB1
--------->
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
---->
ICU4
<---------
YAB1
--------->
AHL20(2)
<---------
WOX13(1)
--------->
AHL20(1)
<
--
YAB1
--------->
YAB1
--------->
ICU4
<-------
GAMYB
--------->
YAB1
<---------
AHL20(2)
->
GT1
<---------
DAG2
<---------
YAB1
<---------
At4g35610
--------->
YAB1
-------
-
CBF
<----------
DOF2
<---------
YAB1
<-----------
HVH21
--------->
YAB1
--------->
YAB1
<------
tatttaattttggtcacttttatgatgttttgtgattatttaattggactgtcatttgggagttgattaatgataagaataataatattatttaaagatt
22100400
<---------
LBD16
<---------
ANAC58
----------->
RAV1(2)
<---------
ANAC46
--------->
AHL20(2)
<---------
ANAC58
--------->
AHL20(2)
<--------
P
<---------
DAG2
<-----------
RAV1(1)
<-------
GAMYB
<----------
DOF2
--------->
YAB1
<---------
MYB46(3)
--------->
DOF5.7(2)
--------->
TOE2(3)
<---------
AtMYB61
<---------
ANAC46
<---------
AHL20(2)
-----------
GT1
====================
RAV
<---------
TOE2(3)
--------->
AHL20(2)
-->
ARR11(3)
<-----------
RAV1(1)
----------->
HVH21
<---------
YAB1
<---------
AHL20(2)
---
ARR11(3)
<---------
ARR14(2)
----------->
TGA1
<---------
AHL20(2)
--------->
AHL20(1)
tgtaaccatattgttgcaaatttgactgtggttgcctggggcatctctgacgtttactttatttaatttttgttatttttggagtttaaaaatttaatgg
22100500
<------
NtERF2
--------->
At4g35610
<---------
At4g35610
<---------
LBD16
------>
NtERF2
<---------
ABI4(2)
--------->
ATERF1(1)
<------
NtERF2
------>
NtERF2
--------->
LBD16
<---------
RAP2.6(3)
<---------
ATERF1(1)
<---------
ATERF1(2)
--------->
ATERF1(2)
--------->
RAP2.6(3)
--------->
ATERF1(1)
<------
NtERF2
<---------
LBD16
<---------
ATERF1(1)
<---------
DEAR3(1)
<---------
PCF2
<------
MYB83
--------->
LBD16
<---------
ANAC58
<---------
DEAR3(2)
<---------
ANAC58
<------
MYB46(1)
<---------
DEAR3(1)
<---------
AHL20(2)
<---------
MYB46(3)
<---------
AHL20(2)
--------->
MYB111(1)
--------->
ARR11(3)
--------->
AHL20(2)
--------->
MYB55(2)
<------
ZmHOX2a(2)
--------->
ETT(1)
--------->
MYB111(2)
<---------
ATHB12
<---------
MYB46(3)
<--------
P
<---------
ALFIN1
--------->
DEAR3(2)
<------
MYB46(1)
<---------
MYB55(1)
--------->
ARR11(3)
<------
MYB83
--------->
ALFIN1
--------->
GLK1(1)
<---------
AtMYB61
<---------
MYB52(1)
<---------
GLK1(1)
<------
ZmHOX2a(1)
--------->
ATHB12
--------->
ALFIN1
----------->
HVH21
aatagagtaataggatggtcggaaattaaatagttgatttgaacgggtgggtgccggcaccggagatcagggaccgatgattttgacattgtttttgttc
22100600
--------->
ANAC58
--------->
ANAC58
<---------
ICU4
--------->
AHL20(2)
--------->
ANAC55(2)
--------->
YAB1
<---------
AHL20(2)
<---------
ANAC55(2)
<---------
ATHB12
<---------
AHL20(2)
<------
ZmHOX2a(2)
<-----------
GT1
<----
<---------
AHL20(2)
--------->
ARR11(3)
--------->
TOE2(3)
--------->
WOX13(1)
--------->
AHL20(2)
--------------->
AGL15
<---------
ATHB12
<---------
MYB52(1)
<-------
TEIL
--------->
AHL20(2)
<---------
ARR11(3)
<-----------
GT1
----------->
GT1
<-
ttactgattcatataatttaagttgcatttaattttcttactcgttttagatcatgtgataagccaataaaccatagtttttagcagttaatcatcgaat
22100700
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AGI:
At1g60010.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40951.1)
Range:
from: 22099025
to: 22100242
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.