Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->ZAT14                 --------->ALFIN1                              --------->DAG2                    <---------O2                             ---------->DOF2                    <---------bZIP60(2)                         <------ZmHOX2a(1)                      <-----------RAV1(1)                        ----------->GT1                  <---------LBD16                   --------->At4g35610                       <---------ANAC46                  <---------HSFB2a(2)      --------->ANAC46                     <---------MYB46(3)                  --------->HSFB2a(2)      --------->ANAC58                    --------->ALFIN1   --------->At4g35610      <---------REM1(1) --------->ANAC58                 <---------DEAR3(1)    ----------->RAV1(2)      --------->ALFIN1  --------->AtLEC2 --                <---------ORA47(1)--------->ZAT18     <---------ARR11(3)        <---------ALFIN1 ---- <------NtERF2 <------ZmHOX2a(1)  <---------ZAT18     --------->ARR11(3)    --------->GLK1(1)   <----   ggtgccaatgtaagtgaggacggtggaggataaaagtgaacacctgagcaagtgaagttctcggagatgtggcccgagaactccacgcacagaagcagcg  20775100                                                     <-------PIF5                                                     <-------MYC2                                                     ------->MYC2                                                     ------->MYC3                                                     <-------MYC4                                                     ------->PIF5                                                     <-------MYC3                                                     ------->PIF4                                                     ------->MYC4                                                     <-------PIF4                                                    <---------ANAC55(2)                                                    --------->ANAC55(2)                                                    --------->ANAC58                                                    --------->TGA1a                                                    <---------TGA1a                                                    --------->ANAC58                                                  <------------OsbHLH66                          --------->At4g35610     <---------ALFIN1                                ---     <------NtERF2        <---------At4g35610    <---------ZAT2                         --------->MYB52(1)    --------->LBD16       --------->ZAT2     --------->ANAC58              --------->LBD16        ---   <---------ANAC46       <---------ZAT2     --------->ANAC58             --------->HSFB2a(2)     ---  <---------LBD16         ----------->RAV1(2)--------->ANAC46            --------->SPL7 ------>MYB83 -------->DOF2         <---------At4g35610 ------->GAMYB                 <---------LBD16------>MYB46(1) ----->DOF5.7(2)       --------->At4g35610 ===================MYC_MYB  <---------SPL7 <---------MYB59 ------DOF2      <---------ZAT6           --------->MYB46(3)      <-------TEIL      -----------------   ttaaggcggagacaattcagagttaagctgctgagtccgatacaaccacgcagcacgtgattcagagtttcatcgtccggagagaaaacctaacagagaa  20775200         <------ZmHOX2a(2)  <---------HSFB2a(1)  --------->HSFB2a(1)  --------->HSFC1(2)  <---------HSFC1(2)                                              --------->MYB52(1) ------>ANAC58                        --------->ARR11(3)--------->ARR14(2) -------->GT1                         <---------ARR11(3)--------->GLK1(2)           <------MYB46(1) ------>ANAC58                     <---------AHL20(2)   <---------ARR14(2)          <------MYB83 ------->ANAC81                    --------->AHL20(2)  <---------GLK1(2)    <------ZmHOX2a(2)   acgaaaattcgatcaatttcatctctattcagaaaaataaaatctccaaattgacgagaatcggaaacttacagagagatcgagggaggtaagagaagga  20775300                                                                   ------>ZmHOX2a(2)                                                                  <------ZmHOX2a(2)                                                                 <---------AGP1                  --------->ATERF1(1)--------->ANAC58            --------->ARR14(2)                 <                <---------DEAR3(1)   --------->ANAC58            <---------ARR11(3)                 <                --------->ALFIN1  --------->ARR14(2)             <-----------ARR10                  -               <---------LBD16    <---------ARR14(2)     --------->GLK1(2)                          <              ------->GAMYB  <---------MYB46(3)         --------->ARR14(2)                          -           --------->MYB52(1)----------->GT1            <---------GLK1(2)                           -      <------NtERF2         <---------AtMYB61 --------->ANAC58   --------->AGP1                     <     --------->LBD16--------->At4g35610       --------->ANAC58   --------->ARR11(3)                <-    --------->LBD16 <---------At4g35610    ----------->HVH21     <---------ARR14(2)       <---------At4g35610    --------->RAP2.6(2)     --------->ALFIN1 <---------LBD16    <---------CCA1(2)         --------->At4g35610   <---------LBD16<------NtERF2<---------ANAC46       ----------->ARR10                <---------At4g35610   agaacgccggaaacaacggcggagcggagagtggtggaaacgcatgcgacggaacagagattctccagatctaaacgcttcagtatttcttctgctaaca  20775400     <-----------HVH21     <-----------TGA1    <---------bZIP60(1)    --------->bZIP60(1)  ===================HOX2a_HOX2a  ------>ZmHOX2a(2) <------ZmHOX2a(2) --------->GLK1(1) ====================HOX2a_HOX2a                                                                   <- ---------AGP1                                                                                    --- -----------ARR10           <---------ARR14(2)                                                    --- -------->AGP1------>ZmHOX2a(1)                                                                   --- ---------ARR14(2)          --------->ARR14(2)                <---------GLK1(2)                   --- -------->ARR11(3)          <---------GLK1(2)               --------->LBD16                      <--- -------->ARR14(2)   <---------YAB1                        <---------HSFB2a(2)                   ---- ---------ARR11(3) --------->YAB1                          --------->HSFB2a(2)                  ----- --------CCA1(2)  --------->ICU4                          <---------LBD16                      <-----   cagatctcgtcacttcctccatgatgaacgaattctctctctccctctccaattccaattcccagaatttccaattcaatcttcttcccctcttgagccg  20775500                                      <---------ANAC58            --------->ATHB12          <---------ANAC58       --------->ARR11(3)            *TSS --------DOF5.7(2)                <---------ICU4 ------>WRKY12                   --------->ICU4 ------>WRKY38(1)                <---------YAB1 ------>WRKY45          <------ZmHOX2a(1)                           --------->MYB52(1)      --------- -------->HVH21       <---------TOE2(2)     ------>NtERF2   --------->YAB1                 -------->P ------MYB52(1)       <---------TOE1(2)     <---------RAP2.6(3) <-----------GT1          --------->MYB46(3) ----->DOF5.7(2)   --------->ANAC58  <---------ICU4        <---------YAB1              ------>MYB83 ---->At4g35610    --------->ANAC58 <---------YAB1         --------->ICU4  --------->AHL20(2)    <--- ----MYB46(3)<---------ANAC46  --------->YAB1      <---------LBD16--------->MYB46(3)   ------>MYB46(1)   ttgacgaaagttattgtttggacgcaggattactcataattcttgccgacttcttcgggtcattataaaccatcggtttaaataaaaccaaacaacctgg  20775600                                                          <---------AHL20(1)                                                          --------->AHL20(1)                                                          <---------AHL20(2)                               --------->At4g35610       <---------AHL20(2)                               <---------At4g35610       --------->AHL20(2)                         <---------ARR14(2)          <---------AHL20(2)           --------->RAP2.6(3)                <---------AHL20(2)                  --------->AHL20(2)   <---------ANAC55(2)                --------->AHL20(2)                  <---------AHL20(2)   ----------->GT1  --------->YAB1  --------->MYB52(1)<-----------GT1             <---------RVE1(1)        --------->ANAC55(2) <------- -->RAV1(2)    --------->AHL20(2)         <---------ANAC46--------->AHL20(2)<-----------GT1  -------- -----P ------------>CBF --------->ARR14(2)     <---------CCA1(1)    <---------GLK1(2) <----------DOF2   tagaaaccggttcaatatttaatttcggttctgagatgaagatggtttggatattttaattttattttgcagattatgtaacaattcggcttttataaca  20775700                                                    --------->ZAT14                                                    <---------ZAT14                  --------->YAB1                                                    --------->ZAT18          <---------HSFB2a(2)                                                  --------->bZIP60(1)        --------->HSFB2a(2)                                      <---------------AGL15              <---------GLK1(1) --------->TOE1(3)                           <------MYB46(1)        <---------bZIP60(1)    --------->GLK1(1)--------->ZAT6                           <------MYB83 <---------MYB52(1)     <---------KAN4(1) <------ZmHOX2a(2)                          --------->MYB59      ----------->HVH21--------->KAN4(2)====================                       <---------ARR14(2)     --------->At5g28300<---------YAB1 --------->ARR11(3) ----GT1               --------->ARR14(2)     <-----------HVH21--------->KAN4(1)--------->ARR14(2) ->YAB1     <---------TOE2(2)        ----------------->AGL1  <---------GLK1(2)  <---------ARR11(3)   atttgggcttaacccatgttttgcaaatttggtccgtcttccattagcggtgacttcactatagattattctagggtttccagatcatcgtaaccctaga  20775800                                                                             <-----------HVH21                                                                             <-----------TGA1                                                                            --------->bZIP60(2)                                                                            --------->ANAC58                                                                            --------->ANAC46                                                                            =========================                                                                            =========================bZIP_DOF                                                                            <<<<<<<<<<HY5                                                                            --------->ANAC58                                                                            <---------O2                                                                            <---------ANAC55(2)                                                                            --------->TGA1a                                                  <---------GLK1(2)         --------->O2            <                                       --------->At4g35610 <---------ZAT14  --------->ANAC55(2)     <                                       --------->ZAT14     --------->ZAT14  --------->ANAC55(1)     <                --------->ANAC46       <---------ZAT14<---------YAB1       <-----------bZIP911(2)   <        --------->AHL20(2)          <---------At4g35610    --------->At4g35610                    ---        ----------->TBP             --------->At4g35610    <---------At4g35610--------->TGA2(2) xxxxx      ------>ZmHOX2a(1)     --------->ANAC55(2)   --------->ARR11(3)       <-----------STF1  <------- ============HOX2a_HOX2a <---------GLK1(2)      ----------->ARR10 <------ZmHOX2a(1) *TSS  <----------DOF2   gtagcctcctataaatacacacagatagatacttgttcatctgcagagtttagattttgactgcagaaggataagaacacgtcatctctgtgcttctttg  20775900                                                                   --------->bZIP60(1)                                                                 <---------TGA2(2)                                                           <---------ANAC58                                                           <---------ANAC46                                          xxxxxxxxxxxxxxxx>smallRNA(se3)                                          xxxxxxxxxxxxxxx>smallRNA(fl3)                                        xxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                        xxxxxxxxxxxxxxxxxx>smallRNA(se3)                                        xxxxxxxxxxxxxxxxxx>smallRNA(si3)                                       xxxxxxxxxxxxxxxxxxx>smallRNA(s2)             --------->DAG2            xxxxxxxxxxxxxxxxxxx>smallRNA(se3)            --------->DAG2             xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       <---------HSFB2a(2)            xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       --------->HSFB2a(2)            xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <----------DOF2                   xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <---------DAG2                    xxxxxxxxxxxxxxxxxxx>smallRNA(se3) <---------ALFIN1              <----------DOF2     --------->ANAC58<---------bZIP60(1) ==============bZIP_DOF        <---------DAG2<---------ETT(2) --------->REM1(2)                    -- -----------------AG     --------->ATHB12xxxxxxxxxxxxxxxxx>smallRNA(fl3)                           -- ---------ZAT14         <---------YAB1xxxxxxxxxxxxxxxx>smallRNA(i)----------->STF1                 <- -----------------AGL1<---------bZIP60(1)xxxxxxxxxxxxxxxxx>smallRNA(se3)                           <- ---------REM1(2)     --------->bZIP60(1)xxxxxxxxxxxxxxxxx>smallRNA(le3)       <---------ARR11(3) === ------>ETT(2)     <---------YAB1    --------->LBD16       <---------ANAC58    --------->ARR11(3) <-- xxxxxxxxxxxxxxx>smallRNA(si3)<---------ANAC58     --------->ANAC58----------->GT1      <---------TOE2(3) ---DOF2   ---------->DOF2    <---------ANAC58   ---------->DOF2----------->TGA1--------->GLK1(2)----   tctacacttttggaaaaggtgatgatatcattgcttttccccaaatgtagacaaagcaataccgtgatgacgttatatggagattttgttgatgttacga  20776000  Previous    Next  AGI:  At1g55590.1    Description:  F-box family protein. Identical to F-box protein At-B (ATB) [Arabidopsis Thaliana] (GB:Q9ZWC6;GB:Q9ARM4;GB:Q9ARM5); similar to F-box family protein (FBL10) [Arabidopsis thaliana] (TAIR:AT2G17020.1); similar to hypothetical protein [Capsella rubella] (GB:CAC36388.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 20772986    to: 20775537    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g55591.1    Description:  MIR158b; miRNA Range:  from: 20775884    to: 20775968    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.