Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                   <-                                                                                                <----                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                              <------                                                                                              <------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                   <---------ANAC46                          <-------                                                   --------->ALFIN1                          <-------                   --------->LBD16      <---------REM1(1)                                    <-------                 <---------LBD16        <-----------RAV1(1)                              <-------GAMYB              --------->At4g35610       <---------MYB46(3)                              --------->MYB52(2)              <---------ZAT14        <---------MYB46(3)                         --------->MYB46(3)<--              <---------At4g35610 <-----------RAV1(1)                     --------->ALFIN1   <-------              --------->ZAT18    <------------AtMYB77                   <---------ANAC58<-----------RAV1(1)              <---------ABI4(2) ------>MYB46(1) <---------DEAR3(1)      <---------ANAC58<---------DEAR3(2)              --------->ZAT14   ------>MYB83<---------At4g35610         <---------ANAC46<---------MYB46(3)        <------ZmHOX2a(1)    --------->MYB46(3)<---------LBD16          <---------ANAC55(1) <--------  <-------GAMYB<---------ALFIN1--------->MYB52(1)<---------ANAC46      <-----------------------TaNAC69(2)   atgctgttgaggagtctgcaccggagtttgaaccaactgttgttgttgctgcggtgtatgcatcatagattgaggcgtgtgaaccatcgtctgttgcggc  20557500 --------DEAR3(1) --------AtMYB61 -----DEAR3(1) -----ANAC46 ---->ALFIN1 ----At4g35610 >NtERF2 --->ATERF1(1) ----LBD16 -NtERF2 ---RRTF1(1) ---RAP2.3(1) --RAP2.3(3) --ANAC58 --RAP2.3(2) --RAP2.6(2) --DEAR3(1)                                 --------->MYB46(3) --RRTF1(2)                               ------->GAMYB                          <-----------RAV1(1) --RRTF1(3)                              --------->MYB46(3)          <-----------RAV1(1)  <---------MYB46(3) --ANAC58                                <---------MYB52(2)          <---------MYB46(3) <-------GAMYB ----NtERF2    <-----------RAV1(1)  ----------->GT1   <---------MYB46(3) <---------MYB46(3) --ANAC46  --------->MYB46(3)  <------ZmHOX2a(1)<---------MYB46(3) <-------GAMYB --------->ALFIN1 -LBD16  <-----------GT1    <------ZmHOX2a(1)  <---------MYB52(1) <-----------RAV1(1)  <-----------RAV1(1)   ggaggtgattgtaacgactgtggctgaagaggaggagattgtaacaaccgttgttgttgttggaattgctgttgttggatgaagtgttgctgttgttgga  20557600                                                               <-------GAMYB                                                              <---------MYB46(3)                                                              <-----------RAV1(1)                                                          <---------ANAC58                                                          <---------ANAC58                                                          <---------ANAC46                                                      <---------At4g35610                                                      <---------ZAT2                                               <---------MYB46(3)                                               <-----------RAV1(1)                                               <---------REM1(1) <---------MYB46(3)               <---------CCA1(2)  <---------ANAC58    --------->At4g35610              ------->TEIL        <---------ANAC46    --------->ZAT2        <-----------RAV1(1)       <---------ANAC58   <-----------RAV1(1)              <-----------RAV1(1)    --------->ARR11(3)         <---------RAP2.6(2)  <---------RAP2.6(2)            ------->TEIL <---------ANAC46            <-----------RAV1(1)   <---------At4g35610 <---------MYB46(3)<---------MYB46(3)   attgctgatattgttgcatctcttgttgttgttgtggctggaattgttgttgttgctgctgcgtctgttgttgttgttgaagatgaaactgttgttgttg  20557700                                                                                                  ===                                                                                           ----------                                                                                          ------->MYC3                                                                             <---------ANAC58     <--                              <---------ANAC58                               <---------ANAC58     ===                              <---------ANAC46                  --------->ZAT14           <-------MYC2                              <---------ANAC58              <---------DEAR3(1)          ------->TEIL                         <---------MYB46(3)         <---------YAB1        <-----------GT1 ------->MYC2                         <-----------RAV1(1)        --------->ICU4------->TEIL         <---------ALFIN1                         <---------REM1(1)   <---------ANAC58   <---------SPL7     ----------->RAV1(2)                      <-----------RAV1(1)    <---------ANAC58   <---------ZAT14   <---------RAP2.3(1)                     --------->ICU4          <---------ANAC46<---------DEAR3(2)   ------>NtERF2   ===                  <---------YAB1    <------ZmHOX2a(1)--------->ATHB12   --------->HSFC1(2)<-------MYC3   ttgttgttgttgttgttgttgtaattgttgttgctggaggaatagttgctggtcatgattcgtcggtgtaccgaagttaccttgcgcctgcacgtttggg  20557800                                                                                   <------NtERF2                                                                                 <---------DEAR3(1)                                                                                --------->ATERF1(1)                                                                                <------NtERF2                                                                               <-----------HVH21                       ==================HOX2a_HOX2a                           ------>NtERF2                       ------>ZmHOX2a(1)              ------>ZmHOX2a(2)       --------->DEAR3(1)                       --------->LBD16                =====================HOX2a_HOX2a                       =====================================HOX2a_HOX2a      --------->RAP2.3(1)                     ----------->RAV1(2)             <------ZmHOX2a(2)       --------->ATERF1(1)                    =====================HOX2a_HOX2a ======================HOX2a_HOX2a                    ------>ZmHOX2a(1)          =============HOX2a_HOX2a      <------NtERF2                   <---------ALFIN1            ------>ZmHOX2a(1)            <---------RAP2.3(1)                 ========================HOX2a_HOX2a--------->ARR14(2)      <---------ATERF1(1) =============================HOX2a_HOX2a      ==============HOX2a_HOX2a    ------>NtERF2   <-------- ----------->WRI1------>ZmHOX2a(1)====================HOX2a_HOX2a          <---------DEAR3(1) ----ZmHOX2a(2) <---------ALFIN1  ------>ZmHOX2a(2) <---------ARR14(2)     --------->DEAR3(1)   ----- =======================HOX2a_HOX2a        <-----------GT1          ------>ZmHOX2a(1)      --------->YAB1 ==========================HOX2a_HOX2a   <-----------GT1        <-----------GT1<---------ATERF1(1)  -   atcatcgaccaattacctcctcctcctgagaattgatccattttttctccttccgatctcgctaattctccttctcgtcgccgtcgtcgtctattaaaac  20557900                                                                                 ----------->GT1                                                                                 <---------YAB1                                                                                 --------->ICU4                                                                          <---------ANAC58                                                                          <---------ANAC46                     *TSS                                                 <---------bZIP60(2)    --------->MYB52(1) --------->ALFIN1                                   <---------ANAC58 -AHL20(2)          --------->DAG2       <---------ANAC46              <---------bZIP60(1) ---->TOE2(3) <----------ID1             <---------ANAC58              --------->bZIP60(1) --------->DOF2    ---------->DOF2       <---------ANAC58       --------->AHL20(2)--------->YAB1   ttaaaagaacgaagaagagacaaaagtgggaacttaaacgatgtcgtgttttgaccaaaaaaaaaaaaaaatgatgtcgtgtcatgataaaacgaagttg  20558000                                         ------>NtERF2                                    --------->KAN4(2)                                         <-----------HVH21                               --------->HSFB2a(1)                                     --------->ANAC46                                    <---------HSFB2a(1)                                 ---------->DOF2                                         --------->HSFC1(2)                              ----------->GT1                                            --------->KAN4(1)                   *TSS       --------->YAB1<---------DEAR3(2)         <<<<<<<<<TBF1     <---------HSFC1(2)       <---------TOE1(3)     <<<<<<<<<ARR1<------NtERF2--------->WOX13(1)    ------>ZmHOX2a(1)       <---------TOE2(3)     <<<<<<<<<ARR2<---------MYB52(1)        <<<<<<<<<TBF1        <---------KAN4(1)    <---------MYB52(1)  <-----------GT1 --------->DEAR3(1)       <<<<<<<<<TBF1          <---------KAN4(2)   ttctcagttaaggttttgtttgtaatttacaatcgtaaaacgccgtcgtttcagtatcaatctcttcttcttcttcttcctctcaaaccgaatgttcttc  20558100                              <---------ZAT18                              <---------ZAT14          --------->GLK1(2)   --------->ZAT14    <-----------HVH21    --------->ZAT18   <------MYB46(1)     <-------MYC3   <------MYB83        ------->MYC3   <---------DEAR3(2)  <-------MYC2                          --------->At4g35610  <---------DEAR3(1)   ------->MYC2                          <---------At4g35610  <---------MYB46(3)   <-------PIF5             ----------->GT1  ---------->DOF2 <---------ORA47(1)    ------->PIF5 <---------ATHB12     <-----------GT1                          <--   ttggtcggtcacaatctgttctgcacgagcactgcacaatcacttggagtctgtgaatttcacatctgaaagaaatacaaactcccatagttttcaattt  20558200                --------->ANAC46    ------>ZmHOX2a(2)   <---------GLK1(1)                                 <---------At4g35610   --------->GLK1(1)                                 --------->At4g35610   <------ZmHOX2a(2)                            --------->ANAC58  --------->ARR14(2)                            <---------ANAC55(2)        <----------DOF2  --------->ARR11(3)                            --------->ANAC46        <---------------AGL15  <---------ARR11(3)                            --------->ANAC58        --------------->AGL15  <---------ARR14(2)<----------DOF2             --------->ANAC55(2)    <-----------------AGL1 ---------GT1 <-----------GT1                   --------->ANAC55(1)    <-----------------AG   tcacgatctccgaatttcacgactttgatacttggtttctttgcacattcacgtaagctccaattcttccttctcttcttttggcaattgattcacatcg  20558300                 --------->ARR11(3)           <---------DOF5.7(2)          --------->WRKY38(1)          --------->WRKY45          --------->WRKY12          ----------->HVH21                    ----------->GT1         --------->DOF5.7(2)                   <---------MYB46(3)        <-------GAMYB                      <---------YAB1       <---------ANAC58       <---------ARR11(3)       <---------ANAC58       --------->ARR14(2)   --------->AHL20(2)       <---------ANAC46       --------->ARR11(3)<-------GAMYB                     ----------->GT1  <---------ZAT6 <---------ARR11(3) <---------ANAC46<---------YAB1              ---------->DOF2   ---  <-----------RAV1(1)         <---------ARR14(2)----------->GT1          <---------ZAT6         <----   aatagtgttgcgttgacgagttcttcgttacagatattgtgtattatggctgttaaaattgaatttgaattgttagtattagcaaagtaatacaaagttt  20558400  Previous    Next  AGI:  At1g55080.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G29580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45707.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78638.1) Range:  from: 20556678    to: 20557921    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g55090.1    Description:  carbon-nitrogen hydrolase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO69481.1); similar to putative NAD synthetase [Oryza sativa (japonica cultivar-group)] (GB:BAC07390.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ70674.1); contains InterPro domain Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; (InterPro:IPR003010); contains InterPro domain Glutamine-dependent NAD(+) synthetase, GAT region (InterPro:IPR014445); contains InterPro domain Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); contains InterPro domain NAD+ synthase; (InterPro:IPR003694) Range:  from: 20558019    to: 20562196    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.