Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ------>YAB1          --------->ANAC55(2)                                                       <---- ----->HAHB4        <-----------GT1                                                --------->ANAC58 ------YAB1    --------->AHL20(2)                                                  --------->ANAC46 ----->ICU4    <---------AHL20(2)                                                  --------->ANAC58 >ANAC55(2)   --------->AHL20(1)                                                  ------>MYB46(1) -ANAC55(2)   --------->AHL20(2)                                                  ------>MYB83  ----- >ANAC58      <---------AHL20(2)                                                --------->TOE2(2) >ANAC46  <---------AHL20(1)                      <-----------GT1              --------->MYB46(3) >ANAC58  <---------AHL20(2)            ---------->DOF2                        <---------MYB52(2) >ANAC55(1)   <---------AHL20(1)   --------------->AGL15       --------->AHL20(2)--------->MYB52(1) -GT1     --------->AHL20(2)       <---------------AGL15     --------->AHL20(2)<---------MYB55(2)   taatagttttaaaaaatttaatttacataatagaaaactaataaaagtatttttactatgtcaaaaaatataagaaaacaaaccaacgtaacacataaaa  19524000                                     --------->ANAC46                    <---------------AtSPL3    --------->ARR11(3)       <---------ANAC58    <---------ARR11(3)       <---------ANAC58 -----AHL20(2)      <---------------AtSPL8            <-----------------AGL2 ---->AHL20(2)    ------->TEIL  <---------WRKY18(1)--------->WOX13(1)                  ---------->DOF2   aaatgagatgttcaaaaacgaatttgtacgagcttgaccacttaactattgagcaatctgatttgggaatggaaggcataaccaaaaaaaaaagagatgt  19524100                     --------->AHL20(2)                     <---------AHL20(2)                    --------->YAB1                   <---------YAB1     --------->YAB1                                           <-----               <----------DOF2        --------->TOE2(3)                                  --------->ARR11(3)               <---------DAG2      <---------CCA1(2)                                     <---------ARR11(3)       --------->AHL20(1)       <-----------GT1                                ------>ZmHOX2a(1) <---       <---------AHL20(2)    <---------AHL20(2)                             ---------->ID1  <--------       --------->AHL20(2)    <---------ICU4                                 <-----------GT1 <--------      --------->AHL20(2) <---------AHL20(2)                                <-----------GT1  ---------      <---------AHL20(2) --------->AHL20(2)                          ---------->ID1     --------->YAB1   gtttttaaaaaaattgactttattaaaataaatatttctatcttagttattccatcaatagttttttttttgttttttttcctatttccatgatattatt  19524200                                            <---------AHL20(2)                                         --------->AHL20(1)                                         <---------AHL20(1)                                         <---------AHL20(2)              --------->AHL20(2)         --------->AHL20(2)       --------->AHL20(2)               <---------AHL20(2)       <---------AHL20(2)               --------->YAB1      --------->YAB1                    --------->AHL20(2)      <---------AHL20(1)             <---------ICU4                           --------->ANAC58 ----YAB1  --------->YAB1            --------->YAB1                           --------->ANAC46 ------AHL20(2)    <-----------HVH21<---------AHL20(2)                      <---------ALFIN1  ------- -YAB1--------->AHL20(2)            --------->AHL20(2)              <----------DOF2           <------ -AHL20(2) --------->AHL20(2)     --------->TOE2(3)              <-----------GT1--------->ANAC46 >ICU4<---------AHL20(2)          --------->YAB1          <---------At4g35610 --------->ANAC58<------   attttcaataaaattataaaatgtcacatttactaatattaattatattatttcacatctagctgtttaacttttgctacacacaaaatgagttatctag  19524300                                        ----------->GT1                                        --------->MYB59                                        --------->MYB52(2)                                        --------->MYB111(1)                                        --------->MYB46(2)                                        >>>>>>>>>>AtMYB44                                      <---------MYB52(1)        --------->ANAC58             ------------>MYB.PH3(2)        <---------O2                <---------TOE2(3)               <---------ARR11(1)        --------->ANAC58 <<<<<<<<<<GATA-1                           <---------ARR14(2)        --------->O2    <---------GLK1(1)                           --------->ARR14(2)           *TSS -->HSFB2a(2)           --------->GLK1(1)                          <---------CCA1(2)            ----- ---HSFB2a(2)  ---------->DOF2 <-------MYC3                        <---------ARR14(1)           ----- ---HSFC1(1) --------->CCA1(2) ------->MYC3               <---------AHL20(2)        <---------YAB1 --   aagaagagccacgagataaaagaatgaaatccacgtttaagttagttacaacggttttattttataagcgtatccatagctatgtgatgcttcttcaagc  19524400                      <---------------AGL15            <---------ARR14(2)            --------->ARR14(2)                                      <----------DOF2            ------->TEIL              --------->REM1(1)  <---------ANAC46           <---------CCA1(2)    <---------GLK1(1)        <---------ANAC58       <---------ANAC46         --------->GLK1(1)    <---------HSFB2a(1)         --------->ARR14(2)   <---------ARR11(3) --------------->AGL15          <---------HSFC1(2)          <---------ARR14(2)   <---------GLK1(2) <-----------------AGL2          --------->HSFC1(2)          ------->TEIL   --------->ARR11(3)<-----------------AGL3          --------->HSFB2a(1)        <---------CCA1(2) ---->TOE2(3)        ----------------->AGL2         ------->TEIL   <---------ANAC58     <----------DOF2 ---->TOE1(3)        <-----------------AGL1--------->AtLEC2        <---------ANAC58  ------>ZmHOX2a(1) -------->DOF2  ------>ZmHOX2a(1)     --------->ANAC46   <---------ANAC58 <----------DOF2   ttaaagattttgtgtatcctcgttcttgtaatggaaatctacaccatgaaaacgaattttcttgtactggctttgtctttgtgtatccttctttcaagct  19524500                                             <<<<<<<<<<GT-3b                   ----------->GT1         <---------YAB1                ----------->GT1          <---------ICU4               --------->MYB59           --------->ATHB51                 --------->ANAC46         <-               >>>>>>>GRF7               <---------AHL20(2)      --------->AHL20(2)    <----------DOF2              <-----------RAV1(2)        --------->AHL20(2)     <---------AHL20(2)  ------->TEIL<----            <-----------HVH21           --------->ICU4          --------->AHL20(2) <---------CCA1(2)         <---------ANAC46            --------->AHL20(2)       --------->YAB1 ------->TEIL     =======         <---------ANAC58            <---------AHL20(2) --------->TOE1(3) --------->ANAC58    <------ZmHOX2a(1)         <---------ANAC58         <----------DOF2       --------->TOE2(3) --------->ANAC58  <--------   tccatgaggtttcttgtcaggtagaaaaaaacatgtcttttaattatttttctttcaaccttaaaaataattttcaacgcatcttgtatctttttaggat  19524600                                                                                 <---------TOE2(2)                                                      --------->KAN4(2)          <---------TOE2(3)      <---------MYB46(3)              --------->ICU4 --------->HSFB2a(1)         <---------TOE1(2)     <---------AtMYB61           ----------->GT1   <------ZmHOX2a(1)     --------->ANAC55(2) --------YAB1           ==================================HOX2a_HOX2a  <---------ALFIN1 -----YAB1              ------>ZmHOX2a(2)<---------YAB1             <---------ETT(1)             <--- ==============================HOX2a_HOX2a  <---------TOE2(3)     --------->MYB52(1)     <----------DOF2 -TOE2(3)             <---------AGP1  <---------YAB1 <---------HSFB2a(1) <---------ANAC55(2) <-------   gatggtagtggtttgagtaatttggatctaatagaacgtgattatcaaggtaaggacattctcagaaataccgacacttatccaaggttttctttctttt  19524700                                                                                             ------>ZmHOX2a(2)                                                                                            <------ZmHOX2a(2)                                                                                            ---------                                                                                            <--------                                                                                           --------->ARR11(3)                                                                                 <------ZmHOX2a(2)                                                                                --------->ARR11(3)                     <---------TOE1(3)                                =============================HOX2a_HOX2a                     --------->MYB59                                  ==================HOX2a_HOX2a       <---------ANAC46              <----------DOF2     <---------------AGL15  <---------ARR11(3)       <---------ANAC58      <----------DOF2    <---------ZAT6        <------ZmHOX2a(1)    <---------ARR11(3)       <---------ANAC58<---------GLK1(2) --------->HSFB2a(2)          ==============================HOX2a_HOX2a ------AHL20(2)      <---------TOE2(3)   <---------HSFB2a(2)        --------->ANAC58       <---------AGP1 ---DOF2     <---------WOX13(1)   <-----------GT1<-----------HVH21  --------->ANAC58 <---------ZAT6   tatttgttttcttggattgattttaggttctctttttttctttctagatagtgtcaatgctcttcaaggcaaggacgatgaagatcagtgtaagatctct  19524800                                                                               <-------TEIL                                                                              --------->CCA1(2)                                                                             --------->ARR11(1)             <---------ANAC58               <---------GLK1(2)                --------->ARR11(3)     --------->ARR11(3)                    --------->At4g35610           ---------->DOF2     <---------ARR11(3)                    <---------At4g35610      --------->At4g35610    <---------CCA1(2)                      <---------ZAT2           <---------ZAT2 >GLK1(1)    <---------ANAC58         ----------->HVH21             --------->ZAT2 ----------->GT1  - -GLK1(1) <----------DOF2       <---------YAB1                      <---------At4g35610           <--   ctctctatatctctttcttgattctatttttgttatgtttgtgacagcttctatgtttctgtgtgtcttcagctgcaaagatacagagtgaaaaccagaa  19524900  Previous    Next  AGI:  At1g52410.1    Description:  TSA1 (TSK-ASSOCIATING PROTEIN 1); calcium ion binding / protein binding. similar to (TSA1-LIKE), protein binding [Arabidopsis thaliana] (TAIR:AT3G15950.1); similar to AGAP002737-PA [Anopheles gambiae str. PEST] (GB:XP_312188.4) Range:  from: 19524397    to: 19529293    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.