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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
YAB1
--------->
YAB1
<---------
ICU4
<---------
YAB1
--------->
ICU4
<---------
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
-------->
HAHB4
--------->
AHL20(2)
----------->
HVH21
<---------
ICU4
--------->
AHL20(2)
<---------
ARR11(3)
--------->
ICU4
<---------
AHL20(2)
--------->
ARR11(3)
--------->
YAB1
--------->
AHL20(1)
--------->
AHL20(2)
--------->
ARR14(2)
<--------
HAHB4
----------->
GT1
--------->
YAB1
--------->
RVE1(1)
<---------
ICU4
---------->
DOF2
----------->
GT1
--------->
CCA1(1)
--------->
AHL20(2)
--------------->
AGL15
<---------
AHL20(2)
--------->
AHL20(2)
--
--------->
ICU4
<---------------
AGL15
--------->
At5g28300
<---------
AHL20(2)
----
agttgtttcgaataattatgatgactataacttaaaaaagaaataaaatactgtaattaaaatttaaaacccctaaataaatatcttctgtgatagttga
19318200
<---------
HSFB2a(2)
--------->
ARR11(3)
<---------
ARR11(3)
--------->
GLK1(2)
----
----------->
GT1
--------->
RVE1(1)
<---------
--------->
GT1
--------->
YAB1
----------->
RAV1(1)
----------->
GT1
----
------>
DOF2
----------->
GT1
--------->
HSFB2a(2)
<---------
ANAC46
<------
aaagagaaaa
ctagttaatatggtgaaataaaaatcttcgagaccacttatcccacataagtccaatttcatcgtctggtttgtaacatttagctttaac
19318300
------>
MYB83
------>
MYB46(1)
<---------
HSFB2a(1)
--------->
HSFB2a(1)
<---------
WRKY18(1)
<------
ZmHOX2a(1)
--------->
WRKY38(1)
<-------
TEIL
------>
ZmHOX2a(1)
----------->
HVH21
--------->
GLK1(2)
--------->
At4g35610
<---------
ZAT14
--------->
ARR14(2)
<-----------
GT1
<---------
ANAC58
<---------
ARR14(2)
--------------->
AtSPL8
<---------
At4g35610
<---------
GLK1(2)
--------->
YAB1
----->
TOE2(3)
------>
ZmHOX2a(1)
<---------
ZAT18
--------->
YAB1
<---------
HSFC1(2)
-
DOF2
------>
MYB83
--------->
At4g35610
<---------
ATHB12
<---------
MYB59
----->
YAB1
------>
ZmHOX2a(1)
<---------
ANAC58
<---------
ZAT6
<---------
ICU4
--------->
HSFC1(2)
<----
-----
GT1
------>
MYB46(1)
<-------
TEIL
--------->
ZAT14
--------->
ICU4
<---------
ARR11(3)
-------
catattgtaccatcctcctctgaacatacagttgcctctgcacttgaccagtgttaatgtgtaatcatcagattcaggaccttcctctataatatggact
19318400
--------->
At4g35610
<---------
At4g35610
--------->
ARR11(3)
------->
MYC2
<---------
ARR11(3)
<-------
MYC2
--------->
ARR14(3)
<-------
MYC3
<-----------
GT1
------>
MYB83
----------->
RAV1(2)
--------->
GLK1(2)
------>
MYB46(1)
<---------
AHL20(2)
<------
--------->
AtMYB61
<---------
YAB1
--------->
YAB1
-------
<---------
MYB59
--------->
ATHB51
<---------
TOE1(3)
<------
<---------
GLK1(2)
------->
MYC3
--------->
AHL20(2)
--------->
MYB59
--------
------
DOF2
<---------
MYB52(1)
--------->
ANAC46
<---------
AHL20(2)
<---------
TOE2(3)
<-------
>
TEIL
<---------
ALFIN1
<---------
WRKY18(1)
--------->
At4g35610
<---------
ARR14(3)
--------->
YAB1
<-
ttcacttcaacaccgtttcccaaattcttgaccaaaccacgttccatctgccgaattattttttcaaaatcttgtttaggtagaataataaaaccattat
19318500
<------
ZmHOX2a(2)
--------->
ARR11(3)
<---------
ARR11(3)
---
ICU4
-->
ATHB51
--
HAHB4
--------->
ANAC46
->
ICU4
<-------
GAMYB
<---------
At4g35610
<---------
ARR11(3)
-
--
YAB1
----------->
GT1
--------->
At4g35610
--------->
ARR11(3)
<-
--------
YAB1
<----------
DOF2
<------
ZmHOX2a(2)
----------------->
AG
<--
taagatcactctcggttaaattcttctttagaacccatggatcatatggagctaaacccaattccaaatcgagttcttgagccat
ccctgctaaaatata
19318600
--------->
ATHB12
<---------
ICU4
-------->
HAHB4
<---------
AHL20(2)
<---------
ATHB51
<---------
YAB1
<-----------
TBP
<---
--------->
ICU4
<---------
TOE2(2)
<---
--------->
YAB1
<------
ZmHOX2a(2)
<----
--------->
TOE2(3)
<------------
CBF
--------->
TOE2(2)
=====
-------->
GLK1(2)
--------->
YAB1
<---------
ARR11(3)
<--------
--------
GLK1(2)
--------->
TOE2(3)
--------->
ARR11(3)
--------->
YAB1
-----
----
ZmHOX2a(1)
----------->
GT1
---------->
DOF2
<-----------
TBP
<------
ZmHOX2a(2)
ggaatcttaattattcatttgtgaatgttaatagtgagattgagaaataaagatcatacctatgttttatatatagttttccgatcaaaatagtctttcc
19318700
<---------
DAG2
<---------
MYB46(3)
<-------
GAMYB
<---------
At4g35610
------
DAG2
<----------
DOF2
<---------
ANAC46
-------
DOF2
--------------->
AGL15
-----------
AGL15
<---------
DAG2
<----
===========================
MADS_MADS
--------->
ALFIN1
-----------
--
DOF2
<-----------
GT1
<----------
DOF2
<-----------
RAV1(2)
<-----------
GT1
---------->
AGL15
--------------->
AtSPL8
<-----------
GT1
------>
ZmHOX2a(1)
<----------
DOF2
tttttcagttgttacgctttttagtacttttccgtttaagaagtttacatttttgtcatcctacaggtgtttcaaacattttgctcaaactttacaatct
19318800
<---------
MYB52(1)
<---------
At5g28300
-------->
P
------>
MYB83
------>
MYB46(1)
<---------
MYB59
------------>
CBF
<---------
At5g28300
--------->
ZAT18
<-----------
GT1
<-----------
GT1
<---------
YAB1
<-----------
GT1
--------->
YAB1
------
DOF2
------->
TEIL
<-----------
GT1
<---------------
AtSPL8
<---------
YAB1
->
CBF
<----------
DOF2
--------->
DEAR3(2)
--------------->
AtSPL8
--------->
YAB1
<--
tttgttttctttatacgaatgttaccgacttaccgtttatgtttatatgtacacaaatcgttttacattactacaaaaattatagttttacaatttctat
19318900
<--------
ATHB1
-------->
HAHB4
<--------
HAHB4
--------->
O2
--------->
ATHB12
--------->
ANAC46
--------->
YAB1
--------->
ANAC55(2)
--------->
ATHB51
--------->
ANAC55(1)
--------->
AHL20(2)
--------->
ANAC58
<---------
ATHB51
--------->
TGA1a
--------->
ICU4
<---------
O2
<---------
YAB1
--------->
ANAC58
--------->
YAB1
<-------
TEIL
<-----------
GT1
<---------
AHL20(2)
--------->
SPL7
===================
bZIP_DOF
--------->
AHL20(2)
<-----------
GT1
<---------
SPL7
<----------
DOF2
--------->
AHL20(2)
-------
AHL20(2)
<----------
DOF2
<-----------
GT1
<---------
TGA1a
--------->
YAB1
<---------
ICU4
ttttttctcgtccaaaaacgctttggtacgattcatgtggaagttttacatttcttttttacacgtctcgttcttgaataaaaacaaattaataattagc
19319000
--------->
ANAC58
--------->
AHL20(2)
--------->
ANAC58
<---------
AHL20(2)
--------->
ANAC46
<---------
YAB1
<---------
ALFIN1
<---------
AHL20(2)
<---------
WOX13(1)
--------->
AHL20(1)
<---------
ICU4
<---------
AHL20(1)
--------->
ATHB12
--------->
ANAC55(2)
-------->
HAHB4
--------->
ANAC46
--------->
ATHB51
--------->
ANAC58
<--------
ATHB1
<---------
ANAC55(2)
<---------
ATHB51
--------->
ANAC58
--------->
ICU4
<-------
TEIL
--------->
AHL20(2)
<---------
AHL20(2)
<---------
ANAC58
--------->
AHL20(2)
<---------
YAB1
<---------
ANAC58
<---------
AHL20(2)
--------->
AHL20(2)
<---------
YAB1
<---------
SPL7
<---------
AHL20(1)
<---------
AHL20(1)
<---------
HSFB2a(2)
--------------->
AtSPL3
<---------
ANAC46
--------->
AHL20(2)
--------->
HSFB2a(2)
<---------
LBD16
--------->
AHL20(1)
--------->
YAB1
>>>>>>>
ZML2
<---------
TOE2(3)
--------->
ANAC55(1)
<--
aaaaacttcgtttacatccaaaataattgacacacggttctagtaccattgatgttgtttgcggtacacgtaataaaatattatttagtggaatacaaat
19319100
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AGI:
At1g51970.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10455.1)
Range:
from: 19318211
to: 19318585
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.