Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
--------->
ARR11(3)
<---------
ARR11(1)
--------->
ARR14(2)
<---------
CCA1(2)
------>
MYB46(1)
<---------
ARR14(1)
--------->
ZAT6
<-------
TEIL
------>
MYB83
--------->
HSFB2a(1)
<---------
At4g35610
--------->
At4g35610
--------->
HSFC1(2)
<---------
ARR11(3)
<-------
MYC2
<---------
ANAC55(2)
-------
<---------
ZAT2
<---------
MYB111(1)
------->
MYC2
--------->
YAB1
<--------
<---------
HSFC1(2)
<---------
ARR14(2)
<-------
MYC3
<-------
TEIL
--------->
YAB1
<---------
HSFB2a(1)
------->
MYC3
<---------
GLK1(2)
--------->
MYB46(3)
--------->
ZAT2
<---------
MYB59
---------->
TaMYB80
<-----------
GT1
--------->
TOE2(3)
aagggagcttcgtttcactaccaaatcttcaagacttgggcatatgcttagaagcgttttcacagattcatcacttgaaaacttaaccaatattaagtgg
18927200
--------->
ALFIN1
<-------
MYC2
------->
MYC3
<-------
PIF5
------->
MYC2
------->
PIF5
<-------
MYC3
<---------
ANAC55(2)
<---------
ANAC46
<---------
bZIP60(2)
<---------
O2
--------->
O2
=========================================
bZIP_DOF
<---------
TGA1a
--------->
TGA1a
--------->
TOE2(3)
------->
TEIL
------>
ZmHOX2a(1)
<---------
MYB52(2)
--------->
TOE2(3)
--------->
ZAT6
=================================
HOX2a_HOX2a
<-----------
GT1
-->
ALFIN1
<------
ZmHOX2a(2)
--------->
HSFB2a(1)
--------->
MYB52(1)
---------->
DOF2
-
ANAC46
--------->
At4g35610
<---------
HSFB2a(1)
---------->
DOF2
----------->
GT1
---
agacgtttgagacagatcaaacgaacatcacgtggaacatccttcaaacttagtttctctaaagtaacagtatcaagttgtgaaaacatgtaaaagctat
18927300
--------->
ANAC58
--------->
ANAC58
--------->
ARR11(3)
<---------
ARR11(3)
---------->
DOF2
----------->
GT1
<-----------
GT1
--------->
At4g35610
------->
GAMYB
<---------
TOE2(3)
<---------
TOE1(2)
<---------
At4g35610
--------->
At4g35610
------>
MYB59
--------->
AHL20(2)
<-----------
GT1
<------
ZmHOX2a(2)
--------->
WOX13(1)
taggcaaatcgaaggaattaaaaaccatctcgatttttagctctctcaaagatcgagcaactgcgatgttaatcaaaggtttgatgtctctacttggaca
18927400
<---------
AtLEC2
<---------
AHL20(2)
<-------
TEIL
<---------
AHL20(1)
<---------
At4g35610
--------->
AHL20(2)
----
<---------
ZAT2
--------->
AHL20(1)
----
--------->
ZAT2
<----------
DOF2
<----------
DOF2
---------
--------->
At4g35610
<------
MYB83
--------->
AHL20(2)
<-----------
GT1
<------
ZmHOX2a(1)
<------
MYB46(1)
--------->
ZAT18
--------->
ARR14(2)
aggaggagtcatcttgagctgcatggtctcaacgcttggtcttttgctaataaattgcacaaactttcagtaagttctacctatggattcaccatcatac
18927500
--------------->
AGL15
<---------
ANAC58
--------->
DEAR3(1)
<---------
ANAC58
------>
ZmHOX2a(1)
--------->
ANAC58
<---------
ANAC46
<---------
ALFIN1
------>
ZmHOX2a(2)
<----------
DOF2
<---------
TOE2(3)
---------->
DOF2
--------->
ANAC58
<-----------------
AGL3
----->
TOE1(3)
===================
HOX2a_HOX2a
<---------
ICU4
----->
TOE2(3)
==================
HOX2a_HOX2a
<---------
ARR11(3)
-----
>
YAB1
<-----------
GT1
<------
ZmHOX2a(2)
--------->
ANAC46
<---------
ALFIN1
----------->
GT1
cttaatgttttcccctccttccaaagagatcgccatcgttttgacaagacacttgtgactaccacatctttacttggaagggaagaaagtatattcaata
18927600
<-----------
GT1
*
TSS
--------->
YAB1
<---------
ICU4
--------->
DAG2
--------->
ATHB51
--------->
ANAC58
<---------
WOX13(1)
---------->
DOF2
--------->
ATHB12
----------->
GT1
--------->
ZAT18
<--
--------->
At4g35610
<--------
HAHB4
----------->
GT1
---------->
DOF2
<---------
AHL20(2)
<---------
At4g35610
--------->
ICU4
--------->
DAG2
--------->
ANAC46
--------->
AHL20(2)
---->
YAB1
---------->
DOF2
<---------
YAB1
---------->
DOF2
--------->
ANAC58
--------->
AHL20(2)
acaattcatctgaaaagtcactgattgaagccat
aattacaaatcggtgaaaagtgaaaagttcacgaaaagtactcactagatttatttagaaatctat
18927700
--------->
MYB46(3)
<-----------
GT1
-------->
HAHB4
--------->
ATHB51
<---------
ICU4
------>
MYB83
<--------
ATHB1
------>
MYB46(1)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
<---------
YAB1
<---------
ATHB12
--------->
YAB1
<-
---------->
ID1
<-----------
GT1
<---------
ATHB51
<---------
ATHB12
--
-------
AHL20(2)
<----------
DOF2
------>
ZmHOX2a(1)
--------->
ICU4
--------->
WOX13(1)
-----
ttttttttgtccctaagtgtttcttttgttacaaacctccttatgagaaaattttggcaaataattgttttaaccaatcagaaaataccattatacaaaa
18927800
<------
MYB46(1)
<---------
MYB46(3)
<------
MYB83
--------->
GLK1(1)
<-----------
RAV1(1)
<---------
GLK1(1)
<---------
YAB1
--------->
CCA1(2)
-------->
ATHB1
<---------
AHL20(2)
--------->
ATHB12
--------->
AHL20(2)
--------->
DAG2
--------->
ATHB51
--------->
AHL20(2)
--------->
ARR11(3)
<---------
ICU4
--------->
WOX13(1)
<---------
ARR14(2)
--------->
AHL20(1)
<-----------
GT1
<----------
DOF2
--------->
MYB52(1)
<---------
AHL20(2)
--------
ICU4
------>
ZmHOX2a(1)
---------->
DOF2
<---------
ATHB51
------->
YAB1
--------->
TOE2(3)
--------->
RAP2.6(3)
--------->
ICU4
--------->
YAB1
---->
YAB1
--------->
TOE2(3)
<---------
ARR11(3)
<---------
YAB1
<----------
DOF2
--------
ataatcaccaattacattaatcctttaatttcgaagatatcggcaaaaagttggaagcgagagaaaattattgttggtttctttgcaaatataacatgca
18927900
--------->
MYB59
<---------------
AGL15
--------------->
AGL15
--------->
YAB1
<---------
ATHB12
------
------>
MYB46(1)
------
------>
MYB83
<------
MYB46(1)
------
--------->
WOX13(1)
<-------
<---------
HSFB2a(2)
--------->
AtMYB61
<---------
At5g28300
<---------
<xxxxxxxxxxxxxxxx
smallRNA(i)
--------->
MYB46(3)
<-----------
GT1
<-----------
GT1
->
AtLEC2
----------->
GT1
--------->
MYB46(3)
<------
MYB83
<----------
DOF2
<---------
DAG2
caaatcgagaaatagtccaaatgttttagtaaaaaaaaaaaaccaccaatcacaatatttggtatttaccattcaactctttttgttttgttactttacg
18928000
--------->
AHL20(1)
<---------
AHL20(1)
--------->
ARR11(3)
--------->
AHL20(1)
<---------
ARR11(3)
<---------
ARR11(3)
--------->
ARR11(3)
------>
ZmHOX2a(1)
--------->
ANAC55(2)
--------->
KAN4(2)
--------->
ANAC46
--------->
YAB1
--------->
TOE2(3)
--------->
YAB1
<---------
MYB52(1)
--->
ANAC58
<---------
KAN4(1)
<---------
YAB1
--------->
At5g28300
--->
ANAC46
--------->
KAN4(1)
--------->
YAB1
------------>
MYB.PH3(1)
<--
--->
ANAC58
<---------
ICU4
<---------
YAB1
--------->
AHL20(2)
--------->
ANAC58
---
----
GT1
<---------
YAB1
<---------
ARR11(3)
--------->
AHL20(2)
--------->
ANAC58
-------
-
DOF2
<---------
YAB1
<---------
AHL20(1)
--------->
AHL20(2)
<----------
DOF2
-----------
ccctcaactataaatacgattattcctcaaaatattttcatttatcatataagaaaataaaaaaccgtgactttcaagtaatatctcaaatattgttaaa
18928100
Previous
Next
AGI:
At1g51050.1
Description:
pseudogene, hypothetical protein
Range:
from: 18927023
to: 18927634
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.