Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->DAG2                            <---------ANAC46      ---------->DOF2                            <---------ANAC58   --------->AHL20(2)                            <---------ANAC58  --------->AHL20(2)                        <---------AHL20(2) -------AHL20(2)                           <---------AHL20(2)                     ------>ZmHOX2a(1) ------>AHL20(2)                           <---------AHL20(1)           <---------ANAC46            - ------>AHL20(1)        <---------ZAT14    --------->AHL20(2)           <---------ANAC58       <----- ->AHL20(2)      <----------DOF2           --------->AHL20(1)           <---------ANAC58       ------ --AHL20(1)    <---------HSFC1(2)       <---------AHL20(2)         <-----------RAV1(1)     <------ZmHOX2a(2) ->AHL20(1)    --------->HSFC1(2)     --------->AHL20(2)           <---------MYB46(3)<---------AtLEC2 --AHL20(2)   --------->GLK1(2)       <---------AHL20(2)      <---------ATHB12    ================HOX2a_HOX2a   taaaataaaaaaggagaagctttgtcttcagtgaaaacatataaatttatttcgtatgagacgaatcaattgttgcttgttgtcctagcatggatcactc  18039200            <---------TOE2(3)                     ---------->DOF2          --------->ICU4           <------ZmHOX2a(2)       --------->ICU4    ----------->GT1<---------REM1(1)       <-----------RAV1(1) <---------ICU4--------->ARR14(2) <---------ARR11(3)  --------->ARR11(3)                         <--- -------->ICU4 <---------ARR14(2) --------->ARR11(3)  <---------ARR11(3)               --------->ARR11(3) ----------AGL15        --------->DAG2 <---------------------WRI1  <---------MYB46(3)  <---------ARR11(3) --------->AGL15       ---------->DOF2--------->At4g35610       <---------ZAT6     ---------->DOF2   taattagtagtaatgaggttttgctaaaagtaacaagatcagttgaagcaaacaaagatgtttttagtgttgttgtttttttggacaaagatgtttttag  18039300                                    --------->ARR11(3)                        <----------DOF2  <-----                                    <---------ARR11(3)                      --------------->AGL15     <----------DOF2       <--------P ------>ZmHOX2a(2)           <----------DOF2     <----------DOF2 ------ZAT6              --------->YAB1<----------DOF2         <---------TOE1(2)      <---------DAG2   tgtttagctttggttattgtggtacaatggtaagtcttgatctttggagttattgttttaagtcgtagcttttattctctctttatagcttttttttagc  18039400                                                               <----------DOF2                                                             <------NtERF2                                                            ------>NtERF2                                                            <---------ATERF1(1)                                                            <---------RAP2.6(3)                                                            --------->LBD16                                                           --------->ATERF1(2)                                                           <---------ATERF1(2)            --------->AHL20(2)                             <---------RAP2.6(2)      --------->LBD16      --------->DEAR3(1)         <---------ANAC58    <---------LBD16       <---------LBD16             <---------ANAC58  --------->YAB1  <---------ARR14(2)  <-----------HVH21              ------>ZmHOX2a(2)------->TEIL       <-------GAMYB  --------->ARR14(2) <----------DOF2   --------->HSFB2a(2)<---------LBD16            <---------ALFIN1 ----At4g35610     ---------->ID1      <---------HSFB2a(2)--------->RAP2.6(3)<-----------GT1   ttagtatccggagataaatttgtctttcaccggcttagtttttggaagggtttgatccttgccggcttcatgtatcaaaatactatcccaccgttgtaag  18039500                                 ---------->DOF2                             --------->AHL20(2)                             <---------AHL20(2)                            --------->AHL20(2)                          --------->YAB1                         <---------YAB1                                                             -                     <---------WOX13(1)                           ---------->DOF2                   <                  <---------ATHB12--------->DAG2    ----------->GT1                 <-----------GT1<-      ------>ZmHOX2a(1)----------->GT1           --------->ANAC55(2)     ---------->DOF2 <----------DOF2     --------->TOE2(3) --------->YAB1       <----------DOF2  ---------->DOF2  <----------DOF2      --   ttgtaatcctcaatggctcaatgaatgataataaataaagttaactctttcaagtgataaaaaaaaagaaaagaagaaagcttttatcacactttctatc  18039600                  <---------ANAC58                  <---------ANAC46              <XXXXXXXXXXXXXXXXXXXXMIR398B/C                                                      ---             <XXXXXXXXXXXXXXXXXXXXMIR398A                                                       <----  ----------->TBP <---------ANAC58                                                              =====  --------->AHL20(2)                                                                            <---- -------------->AGL15                                                        ----------->GT1    <---- ---------------AGL15                                                --------->MYB52(1) xxxxxxxxxxxxx ----------------AGL3                                     --------->MYB52(1)>>>>>>>>>TBF1       <---- --------------->AGL2              *TSS     --------->MYB46(3)    --------->GLK1(2)    <---------REM1(1)   ccctataaatagaagggatggcttgaagacacatactgaaaacagaacaaacacaaacacaaacagagaatcaacgaagaagaaaaatggtgaaggtgat  18039700                             --------->GLK1(2)                            <---------GLK1(2)                            --------->ARR14(2)                          ----------->ARR10                         <------NtERF2                         --------->ATERF1(1)                        ------>NtERF2                        <---------DEAR4(2)                        <---------ATERF1(1)                        <---------ERF1                        <---------RAP2.3(1)                        <---------ORA47(2)                       --------->ATERF1(2)                       <---------RAP2.3(3)                       <---------ATERF1(2)                       --------->DEAR3(1)                                                          <-                       <---------ANAC46                                                            --                       <---------DEAR3(1)                                                          <-                       <---------RAP2.3(2)                                                         <-                      <---------ABI4(1)                                                            <-                      --------->ATERF1(1)                                                          <-                      <------NtERF2                                                               ---                      --------->DREB2C(1)                                                         <--                      --------->DEAR4(2)                                                          <--                      --------->At4g35610                                                         <--                     ------>NtERF2                                                                ---                     <---------RAP2.6(1)                                                          <--                     <---------RAP2.3(1)                                                         <---                     <---------ATERF1(1)                             <---------ANAC58            ----                     <---------RRTF1(1)                          <---------ANAC58                ----                     <---------ORA47(2)                          --------->TGA1a                 <---                     <---------ERF1<----------DOF2               <---------O2                   <----                    <---------RRTF1(3)                           <---------TGA1a --------->At4g35610                    <---------ANAC46                             --------->bZIP60(1)            <----                    <---------DEAR3(1)                           <---------ANAC58----------->RAV1(2)<                    <---------RRTF1(2)                           <---------bZIP60(1)            <----                    <---------RAP2.3(2)                          <---------ANAC46====================      <---------ANAC58<---------At4g35610                        <---------ANAC55(2)           <-----      <---------ANAC58--------->RAP2.3(1)           <------NtERF2<---------bZIP60(2)           <-----   <---------ARR14(2)<---------DEAR4(2)            ------>NtERF2 --------->ANAC55(2)          <------  <---------GLK1(1) <---------DREB2C(2)           --------->ALFIN1   <---------ANAC58        --------  --------->GLK1(1) --------->ATERF1(2)          <-----------HVH21  --------->ZAT2           <-------  xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      --------->LBD16  <---------ANAC55(1)        ------->MYC3 ------>ALFIN1      <---------ATERF1(2)     --------->PCF5       =================================bZIP_DOF -----bZIP60(2)     <---------RAP2.6(2)   <---------DEAR3(2)    <-----------------------TaNAC69(2)<-- =============================================bZIP_DOF         <---------TGA2(2) <---------At4g35610- -----ANAC46        <---------RAP2.3(3)<-----------GT1        ----------->HVH21  <---------ZAT2<----- -----O2         ----------->HVH21 ========================================bZIP_DOF    <----------DOF2 xxxxxxxxxxxx>smallRNA(fl3) <---------ARR14(2)<---------LBD16 ----------->TGA1   --------->ZAT2<----- -----TGA1a      <-----------RAV1(1)  ----------->HVH21      <-----------HVH21  ------->TEIL<-------MYC3   gtgggtttccgttttagctctggcggcggcgattctccttttgacggtcccggtggcagaaggggtgacgtgctcgcctatgcagctggcttcatgtgcg  18039800       --------->TGA2(1)       <---------TGA2(1)       --------->ANAC55(2)       <---------bZIP60(1)       --------->bZIP60(1)       <---------O2       <---------ANAC55(2)       --------->O2       <<<<<<<<<<HY5       >>>>>>>>>>HY5      ----------->STF1      <-----------STF1     <---------TGA2(2)    ----------->TGA1    ----------->HVH21 <---------DEAR3(1) --------ORA47(2)              <---------ANAC58 ---->NtERF2          --------->DEAR3(1) --------RAP2.3(1)   <------NtERF2 --------ERF1       <---------ATERF1(1) --------DEAR4(2)   ------>NtERF2 --------ATERF1(1) --------->RAP2.3(3) ------>ATERF1(2)  --------->ANAC46 -------RAP2.3(2)  --------->RAP2.3(2) -------RAP2.3(3)  --------->DREB2C(2) -------ATERF1(2)  --------->RRTF1(3) ------>DEAR3(1)   --------->DEAR3(1) -------ANAC46     --------->RRTF1(2) ---NtERF2         <---------ATERF1(2) ----->ATERF1(1)   --------->ATERF1(2) -->NtERF2        --------->RAP2.3(1) ------ABI4(1)    --------->DEAR4(2)                                                             ---- -----RAP2.3(1)   --------->ATERF1(1)                                                            ---- -----ATERF1(1)   <------NtERF2<---------ANAC46                                                 ----- ------NtERF2     --------->RRTF1(1)                                                            ----- -----ORA47(2)    --------->ERF1 --------->ALFIN1                                              ------ ====RAV<-----------TGA1       <---------ANAC55(1)      <---------ZAT2                        <------ ----RAP2.6(2)    --------->ORA47(2)                    --------->At4g35610                  -------- ----RAP2.3(2)   ------>NtERF2<------NtERF2             <---------At4g35610                 --------- ---LBD16        <---------RAP2.3(1)        --------->ZAT2                          <---------ARR14(2) ->ALFIN1--------->TGA2(2)  <---------DEAR3(1)       --------->At4g35610    <-------TEIL  ------>MYB83 ----RAV1(1)     <---------ATERF1(1)        <---------ZAT2--------->RAP2.6(2)       --------->ARR14(2) -------DEAR3(1)--------->DEAR3(1)          --------->At4g35610    <----------DOF2 <------ZmHOX2a(1) -------->ATERF1(1)--------->RAP2.6(2)      <---------At4g35610  ----------------->AGL1   ------>MYB46(1) ----RRTF1(2)   <---------DEAR3(1)       ---------->DOF2--------->ZAT2 <---------ANAC46  <---------ALFIN1 ----DEAR3(1) <-----------HVH21<---------ANAC58      <---------At4g35610<---------MYB46(3)-------->P   gcggcgatgacgtcatcgtcgccgccatcggaggcgtgttgcacaaagctgagagagcagcagccatgcctttgtgggtacatgaggaaccctaccctcc  18039900        --------->MYB52(2)      --------->DOF5.7(2)      <---------MYB52(1)                                                           <---------ICU4     --------->TOE1(3)                                                             --------->ATHB12     --------->TOE2(3)                                                            <---------YAB1    <---------ANAC55(2)   ---------->DOF2                                         --------->ICU4 --------->ARR14(2)    --------->ANAC58                                         <---------ICU4 <---------ARR14(2)    --------->ANAC58                --------->HSFB2a(2)      --------->YAB1 -->NtERF2         --------->ANAC58                <---------ANAC58            --------->ICU4 ----->LBD16       --------->ANAC46                <---------ANAC58            <---------ATHB12 ---->ANAC46       --------->ANAC58             --------->GLK1(2)        ----------->GT1     <------- ---->DEAR3(1)   ---------->DOF2               <---------GLK1(2)     <------ZmHOX2a(1)<---------AHL20(2) --->SPL7--------->At4g35610                  --------->HSFB2a(1)  <---------TOE2(3)  --------->AHL20(2) ---ATERF1(1)    --------->MYB52(1)           <---------HSFB2a(1)  <---------TOE1(3) <---------WOX13(1) ->ANAC46<---------At4g35610           --------->At4g35610  <---------ZAT2   --------->WOX13(1)     - >MYB46(3)      ----------->HVH21  ----------->RAV1(1) <---------HSFB2a(2)--------->TOE2(3)  --------   gccaatacgttagctcccctaacgcaaggaaagtctccaacagttgcaagattccttccccaagctgttaaggaaatgttaatcatgattaattagtgac  18040000                                                                                             <-------                                                                                   <---------WOX13(1)                                                                                 --------->ATHB12 ---                                                                                --------->ICU4 <-----                                                                                <---------YAB1<------                                                                            <---------WOX13(1)-------                                                                          --------->ATHB12<---------WOX13(1)                                                                         <---------YAB1 --------->ATHB12                                                                       --------->YAB1  <---------YAB1                <---------MYB46(3)    <-----------TGA1     <---------AHL20(2)  <---------TOE2(3) <---    <---------At4g35610               <-----------HVH21    --------->AHL20(2) --------->YAB1--------- --ZAT6  <---------YAB1              --------->ANAC46   --------->YAB1--------->ICU4  <---------TOE2(3) -------->ARR14(2)             <---------CCA1(2)     --------->YAB1   <---------YAB1 --------->YAB1 < --->HVH21--------->YAB1----------------------->TaNAC69(2)<---------YAB1 --------->ICU4--------->ICU4   aagtttcgctgattatagtggttaatgctggtcttatcttcgtcactactatttagaataataaatgaagtgatgatgattgatgattgatgattgatga  18040100  Previous    Next  AGI:  At1g48750.1    Description:  protease inhibitor/seed storage/lipid transfer protein (LTP) family protein. similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT3G18280.1); similar to TED4 [Zinnia elegans] (GB:BAA06462.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); contains InterPro domain Plant lipid transfer protein and hydrophobic protein, helical; (InterPro:IPR013770) Range:  from: 18039635    to: 18040178    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g48760.1    Description:  DELTA-ADR (DELTA-ADAPTIN); clathrin binding. similar to clathrin binding [Arabidopsis thaliana] (TAIR:AT1G60070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68086.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Adaptor protein complex AP-3, delta subunit (InterPro:IPR017105); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Clathrin/coatomer adaptor, adaptin-like, N-terminal; (InterPro:IPR002553) Range:  from: 18039654    to: 18043073    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.