Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------AHL20(1)                                    --------->AHL20(2)                                    --------->AHL20(1)                                    <---------AHL20(2)                       ------>ZmHOX2a(1)                   <---------ARR14(2)  <---------AHL20(2)                  <---------CCA1(2)--------->AHL20(2)                                  <---------ANAC58                ------>ZmHOX2a(2)  --------->YAB1                             ------->GAMYB    --------->TOE2(3)  --------->HSFB2a(2)                                   xxxxxxxxxxxxxxxx>smallRNA(s)    --------->TOE1(3)  <---------HSFB2a(2)     --------->At4g35610          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <-----------GT1==============HOX2a_HOX2a      <---------At4g35610          --------->At4g35610 ---DOF2      --------->ARR14(2)  <---------YAB1                   --------->DAG2      <---------ANAC58 ------------->WRI1--------->ARR14(2)  <---------YAB1             ---------->DOF2     <---------STY1(2)   tgtttaccttcaactggatcgtatcctagaaaaactattatattattccagcttaatctgggtatgggtaaagttatcaactgtctcttgctagggttcc  17578100                                                            <---------ICU4                                             <---------ARR14(2)                                             --------->ARR14(2)                                             <---------GLK1(2)                                 --------->ANAC58          --------->AHL20(2)                                 --------->ANAC58 --------->LBD16                               ---------->DOF2   <---------ANAC55(2)                               --                              <------ZmHOX2a(2)  <---------ANAC46             <---------MYB52(1)-----                              =================================HOX2a_HOX2a   ----------->GT1  <------                             --------->ARR11(3)  <---------ANAC58           --------->HSFB2a(2) -----                             <-----------ARR10--------->GLK1(2)             <---------HSFB2a(2)<-----        <----------DOF2     --------->At4g35610  <---------ANAC58   --------->REM1(1)    <---------YAB1  --------->MYB52(1)  ---------->DOF2  ----------->HVH21<------ZmHOX2a(1)------>ZmHOX2a(1)--------->YAB1   aaactatcggcatttttgatgtcttaaagcagatcaagccctggacagattccgtagaggaataaatactacatccttctggtaattccatatgataacg  17578200                                                                   --------->ZAT18                                                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                  <------ZmHOX2a(1)                                                           --------->ARR14(2)                                                           <---------ARR14(2)                                                         --------->LBD16                                                        <---------ANAC46                                                        --------->ANAC55(2)                                                        <---------ANAC58    --------->ZAT2                                      <---------ANAC58    <---------At4g35610              <---------ZAT14    <---------ANAC55(2)    --------->At4g35610         <---------GLK1(1)      <---------LBD16 -------->DOF2              --------->HSFB2a(2)    <-----------RAV1(1)           ---------->ID1 ---->TOE1(3)            <----------DOF2           <---------REM1(1)    --------->ANAC58 ---TOE2(3)           <---------ARR11(3)          --------->ARR11(3)    --------->ANAC58 ---->TOE2(3)         --------->ARR11(3)          <---------ARR11(3)    --------->ANAC46 -----ID1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)   ataaagagctgagaagaagagtaagaccttttagaattctgaagtgaatgaagatgttgcggaattgaggacacaaacaacttgtcattttctatgaagc  17578300                                                                 --------->YAB1                                                               <---------WOX13(1)                                                             <---------MYB46(3)                                                             --------->ATHB12                    ----                   <---------PCF2                           <---------YAB1                  ---------                --------->ALFIN1                          <---------MYB46(3)              ------->GAMYB              <---------TGA1a                            <---------DEAR3(1)              --------->ANAC58              <---------ANAC46                           --------->ALFIN1                --------->ANAC58              <---------ANAC58                           <---------AtMYB61               --------->ANAC46              <---------ANAC58                        <---------MYB46(3)            --------->ANAC58              <---------MYB46(3)                      <---------DEAR3(1)            --------->ANAC46             <---------DEAR3(1)                       ------>ZmHOX2a(2)             --------->ANAC58            ------>NtERF2                           --------->ARR14(2)     <---------HSFC1(2)    ----   ---------->DOF2 ----------->HVH21                <---------ARR14(2)  ---------->DOF2--------->MYB52(1)   =====================bZIP_DOF      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)--------->HSFC1(2)    ----   aaactaaaagactcggccgtggggaccgagtttcgaacaagttgatgaaatatggatcggtggtgattgataaccaaagcttcgacacacaacgaaacct  17578400                                           <------ZmHOX2a(2)                                           ==============HOX2a_HOX2a                                          --------->ARR11(3)                                          --------->ARR14(2)                                          <---------ARR14(2)                                          --------->AGP1                                   <---------TOE1(2)                                   <---------TOE2(2)                             <---------GLK1(1)                            <-----------ARR10<---------HSFB2a(2)       >>>>>>>>>ARR2                            --------->ARR11(3)                        --------->ATHB12                            <---------ARR11(3)                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                   --------->TOE2(3)    --------->MYB59      <---------ZAT2                --------->HSFB2a(2)      <---------GLK1(1)     --------->ARR14(2)               --------->At4g35610      <----------DOF2 ----->ANAC58      --------->TOE1(3)    ----------->ARR10   ------->TEIL              <---------DAG2 >ARR14(2) <-----------RAV1(2)    --------->LBD16     <----------ID1  <------------------------ANAC81 ----->ANAC46  <--------P   <---------ARR14(2)--------->LBD16<---------At4g35610<----------DOF2    <- ----->ANAC58 <---------MYB52(1) <---------TOE1(1)<------ZmHOX2a(1)  <---------YAB1<-----------GT1 <-   cgcaatagatttctcaggtagccttaagagtatctccgaggttagatccagaggaagggacgaagctgattttgattgtgttcttttacttttcgagact  17578500                                                xxxxxxxxxxxxxxxx>smallRNA(s)                                              xxxxxxxxxxxxxxxx>smallRNA(s)                                   <xxxxxxxxxxxxxxxxsmallRNA(s)                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                              <----------DOF2--------->TOE2(3)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                         -                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                        <                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                 <---------DAG2          <                        <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)            <-----------GT1          <--                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <----------DOF2              <--                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         <---------ANAC58       <-------TEIL                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          <---------ANAC46   <---------AHL20(1)                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          <---------ANAC58   <---------ARR11(3)                  <-----------RAV1(1)        --------->TOE1(3) <-----------RAV1(1)    ----------->TBP                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          --------->ALFIN1   ------------>CBF--- ---------DOF2<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)----- --------DAG2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <----   acttttctcttcttctgtttttgttgctccatcttttgtagtcaaaaccctaatttgttcaggctgtgttgctttcaaccttttctcaatatatacatat  17578600           --------------->AtSPL8           --------------->AtSPL3           <-------TEIL        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)      <-----------TBP      --------->AHL20(2)      <---------AHL20(2)    --------->AHL20(2)    <---------AHL20(2)                                            ------>ZmHOX2a(2)    <-----------TBP                                              <------ZmHOX2a(2)  <-----------TBP                                               --------->ARR14(2)  <---------AHL20(2)                                            --------->ARR14(3)  --------->AHL20(2)                                            <---------ARR14(2) -------->AHL20(2)                                              <---------ARR14(3) ---------AHL20(2)                                              --------->ARR11(3) -----------TBP                                        <---------AHL20(2)  <---------YAB1 -------AHL20(2)              <------MYB83             --------->AHL20(2)--------->YAB1 ---------TBP  ------->TEIL   <------MYB46(1)      --------->AHL20(2)    ----------->GT1 ------>AHL20(2)     ------>ZmHOX2a(1)            <---------YAB1<---------ARR11(3) ---->AHL20(2) <-------TEIL  --------->MYB59 <----------DOF2    <---------AGP1  --------->MYB52(1) -------TBP<---------------AtSPL8      <-----------GT1<---------AHL20(2)<---------YAB1 <---------MYB46(3)   atatatatatatatacgtacatcctatgcattaggttttattttctacttttattatttatttgaagatcttatatgataaataagggtttgttcaaaaa  17578700                --------->MYB52(1)           <---------YAB1                                            <----------DOF2         ----------->GT1                                          ---------->ID1         --------->YAB1                    --------->HSFB2a(2) <----------DOF2        ----------->GT1                    <---------HSFB2a(2) <---------DAG2        <---------YAB1                  <----------DOF2 <xxxxxxxxxxxxxxxxxsmallRNA(se3)    --------->AHL20(2)     ------>ZmHOX2a(1)           <---------REM1(1)                <----------DOF2   aaaaaaaaaaatgataaataagggttctccttcaaacttatactttgagaagttgacatgtagcacttttccttttgacatttgtcatttcttttatact  17578800                                             --------->AHL20(2)                                    <---------YAB1                                                 --                  <---------At4g35610--------->AHL20(2)                                            <-              <---------AHL20(2)  <--------HAHB4                                                   <-            <---------YAB1 <------------CBF  <---------AHL20(2)                      <--------ATHB1--          --------->AHL20(2)      --------->YAB1--------->AHL20(2)                  <---------YAB1 <-          <---------AHL20(2)     <---------YAB1 <---------AHL20(2)                  --------->ICU4 --       --------->TOE2(3)   >>>>>>>>>ARR2<---------AHL20(1)                          <---------ATHB12<    ----------->RAV1(1)  <---------YAB1 --------->AHL20(1)            ---------->DOF2--------->ATHB12   taaatccaacatttatttttatctgatttgattgtatcattatatattaaaaaattcaaaagttttaaatcaaaaagaaatatacaatgatttgttttca  17578900              <---------AHL20(2)              --------->AHL20(1)              <---------AHL20(1)              --------->AHL20(2)             --------->AHL20(2)            <---------YAB1                                                                     <-----          --------->YAB1                                                                       <-----         <---------YAB1                                                                     <--------        <---------ARR11(3)                                                                 --------->ICU4        --------->ARR11(3)                                                                 <---------AHL20(2)    <---------AHL20(2)                                                                     <---------ATHB51   --------->AHL20(2)                                                               --------->AHL20(2) ------->AHL20(1)                                                              --------->AHL20(2) <-- --------AHL20(1)                                          <---------AHL20(2)----------->GT1--------- --------AHL20(2)                                       --------->YAB1   --------->YAB1    --------->AHL20(2) ------->ARR11(3)                                    --------->YAB1--------->YAB1  --------->AHL20(2) --------ARR11(3)                     <---------GLK1(2)<---------YAB1  <---------YAB1  <---------YAB1 ------->AHL20(2)      --------->ARR11(3)        <---------YAB1    --------->TOE2(3)<---------AHL20(2) ---------AHL20(2)     <---------ARR11(3) <----------DOF2  --------->AHL20(2)<---------ANAC55(2)  ---   atatatttaatatcattatattgaatatctatgagagacacattctttgttatatttataataaaacaaacttaatattaagtaaatttataaataatta  17579000  Previous    Next  AGI:  At1g47765.1    Description:  F-box family protein. Identical to Putative F-box protein At1g47765 [Arabidopsis Thaliana] (GB:Q9FZF3); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G47790.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60954.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 17577346    to: 17578532    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.