Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------ZAT18                                                     <---------MYB52(1)                                                    --------->LBD16                                                   <---------ANAC46              <------NtERF2                                                   <---------ANAC58            <---------ANAC46                    <---------ZAT18             <---------ARR14(2)             <---------ANAC58                 <---------ANAC46               <---------MYB52(1)             <---------ANAC58                 <---------ANAC58               --------->ARR14(2)            <---------LBD16                 <---------ANAC58              <---------SPL7               --------->DAG2             <---------DAG2                   *TSS <---------ANAC55(1)  ----------->TBP             <----------DOF2               --------->ANAC46            ------->TEIL <-----------------AGL1           ----------->GT1  <---------ANAC58 ----------->GT1     <------------CBF   gttttcaaatttgggcttttcgtgggcttcttaaaaatgtataaaacgccgttccgtgggcttcttaagaatgtatataaggcgggtttgaattgtctaa  17100500                                                                           ================MYC_MYB                                                                           <--------P                                                                          <---------ANAC58                                                                          <---------ANAC58                                                                          =================MYC_MYB                                                                          <-------GAMYB                                                                         <------MYB46(1)                                                                         <---------MYB46(3)                                                                         <------MYB83                                                                       <---------MYB55(1)                                                                      <---------MYB52(1)                                                                    <---------ANAC58                                                                 <-------PIF5                                                                 ------->PIF5                                                                 ------->MYC3                                                                 <-------MYC2    <---------ANAC58                                                                 ------->MYC2    <---------ANAC46                                                                --------->ATERF1(1)                                                                ====================MYC_MYB                                                                <---------ANAC58 <---------ANAC58                                                                <---------ANAC46 <---------ANAC55(2)                                                                <---------TGA1a  ====================                                                                --------->TGA1a  --------->O2                                                                =====================================                                                                <---------ANAC58 <---------O2                                                                ==================MYC_MYB                                                               --------->LBD16   <---------TGA1a                                                               ------>NtERF2 <------MYB83                                                     =====================bZIP_DOF                                       --------->TOE1(3) ==================================bZIP_DOF                        --------->ARR14(1)           ---------->DOF2<---------ANAC58            <-----------GT1            <----------DOF2   =================bZIP_DOF           --------->AHL20(2)          --------->TOE2(3) ---------->DOF2<---------AtMYB61      ------------>CBF --------->ARR14(2)            ======================================bZIP_DOF     --------->YAB1    <---------ARR14(2)         <---------TOE2(3)<-------TEIL  --------->TGA1a  <----------DOF2 <----------DOF2      ===================================bZIP_DOF  ------>ZmHOX2a(1)    <---------GLK1(2)       --------->AHL20(2)<-------MYC3<------MYB46(1)    -----   cgtcctttcacaattaacttctttggattcggtttcatcaactttaaaatttaagaaaagaaagccgcgtgcgtttggttgggacgtgagacaatagaca  17100600                                        <----------DOF2                                        <---------DAG2<---------ANAC58        --------->AHL20(1)                                       <---------ANAC58                       <---------AHL20(2)                                       <------------------------ANAC81        <---------AHL20(1)                                       <---------ANAC58          <-----------GT1 ======bZIP_DOF              <-----------GT1          <---------ANAC58        --------->AHL20(2) ======bZIP_DOF        <---------AHL20(2)           <-----------GT1     <-----------GT1 ----->DOF2            --------->AHL20(2)     ---------->ID1    <-----------GT1          --------->AHL20(2)   aagacaacttctcacttctcagtttttaattttgccaacttgctttttgtcttatttcttcccattttaccaattcacattttattacaaaaaaaataga  17100700                                                                                                  <--                                                                                              <------                                                                                              <------         --------->ANAC46                     <-----------GT1      --------->ANAC55(2)        -------   --------->AHL20(2)                       <----------DOF2--------->At4g35610     <----------DOF2<--   <---------AHL20(2)                 <---------YAB1<----------DOF2<---------ANAC55(2)        -------   actatatatatacacatctattactatattttccaatattgtgattctttacctctttattagctaaatatgtattcaaatttgtcttttggtaactgca  17100800                                                                                              -------                                                                                           --------->TOE2(3)    <---------AHL20(2)                                                                  --------->MYB52(1)   <---------AHL20(2)                                                                   ------>MYB46(1) --------DOF2                                             <-----------GT1               ------>MYB83- ---ZAT14                                                --------->AHL20(1)           <---------MYB52(2) ---ZAT18              ---------->DOF2       <---------YAB1       ----------->GT1     <---------MYB46(2) -->ZAT18   <----------DOF2                 <---------AHL20(1)  <---------ANAC58      <---------MYB59 -------DAG2<---------DAG2         <----------DOF2       --------->ARR11(3)           <---------MYB111(1) -->ZAT14<-----------GT1    <-----------GT1 --------->AHL20(1)  <---------ANAC58    ------->TEIL<----   ctttttttatttgactttttcttagaaaagtttccatcttttctaatatttttgaaaaatatactgtcttgataaatgtgaatttgaacctaacctatat  17100900            <---------ICU4            --------->YAB1           --------->ICU4           <---------YAB1         <---------ICU4        --------->ICU4        <---------YAB1      <---------ICU4                                        <----------DOF2                         <      --------->YAB1           *TSS   <---------YAB1   <----------DOF2                       <-------     --------->ICU4          --------->ARR14(2)    <---------ZAT18     ------>ZmHOX2a(1)    <--------     <---------YAB1          <---------ARR14(2)   <---------ANAC58    --------->TOE2(3)    <---------ICU4 ---->TBP--------->YAB1    --------->LBD16  <------MYB46(1)<---------ANAC58               --------->ICU4 -------->ANAC55(2)      <---------LBD16    <------MYB83   <---------ANAC58               <---------YAB1 -----AHL20(2) --------->YAB1<---------GLK1(2)    <---------ANAC58<----------DOF2   <<<<<<<<<TBF1<---   atatgtaataataataataatcttctctccggattctattctcatttggtttgtgtgctttgctttcgctttcctcaattctcttcttcttcattatttt  17101000                                                                                          --------->AtMYB61                                                                                          --------->YAB1    <-----------GT1                                                              <----------DOF2 <----------DOF2                                       <-----------ARR10        <---------ANAC58 ---------DAG2                                         --------->GLK1(2)        <---------ANAC58 --YAB1                                               <---------GLK1(2)     <----------DOF2     <---- -AHL20(1)<----------DOF2 <---------MYB52(1)   <---------TOE2(3)      <---------ANAC58    --------->TOE2(3) --------GT1      --------->ZAT14          <----------DOF2 -------->P <---------ANAC58    --------->TOE1(3)   tgccttttacctcttttctctgcaatcggtttcttctctcattgtctttgacgaaagaatctacccataagagcgtttctttgctttctcaaccataact  17101100                                 <-------GAMYB                                <------MYB46(1)                                <------MYB83                                ----------->GT1                               <---------MYB46(3)                              <---------ANAC46                            <------MYB46(1)                            <------MYB83                     --------->ANAC46--------->ICU4           <------MYB46(1) <---------AtMYB61                                         --------->TGA1a       --------->ATHB12    --------->MYB55(2)                                        <---------TGA1a     <------ZmHOX2a(2)     <---------MYB46(3)==================================================bZIP_DOF    --------->AGP1 ---------->DOF2   <---------YAB1                 --------->ICU4   --------->O2 ------DOF2<------MYB83 --------->ATHB12     <----------DOF2   --------->YAB1        <---------O2   ttctcagatcgattggtttcttcaagcgattggtgggttattattagctttctgtgttttgttcatcgtaatattcaatacaatctctcgtgactaaaaa  17101200                                                                          <------MYB46(1)                                                                          <---------ANAC46                                                                          <---------ANAC58                                                                          <------MYB83                                                                          <---------ANAC58                                                                         <---------MYB46(3)                                                      <----------DOF2    --------->MYB111(1)                                                   --------------->AGL15 --------->MYB46(2)                                              --------->ARR11(3)         <---------AtMYB61                            ----------->GT1   <---------ARR11(3)  ------->TEIL                          <---------ANAC58   --------->GLK1(1) <---------MYB52(2)                          <---------ANAC58   <---------GLK1(1) --------->ANAC58                     <              <---------ARR11(3)             <---------CCA1(2) --------->ANAC58            --------->DAG2              --------->ARR11(3)       <---------AtLEC2     <------ZmHOX2a(1)     <----------DOF2   <   ttgagtttttgaaatagattttagcatgggttgtgatatttgaatggatatctctgtttttaggaacgaacttgtttggtgtttctttggcaaaaggtta  17101300                                               <---------ARR14(2)                                     <-------GAMYB     <---------TOE1(3)              --------->MYB52(2)     <---------TOE2(3)              <---------MYB46(3) <---------DAG2                   <---------ANAC46            ------>ZmHOX2a(1)       <---------ANAC58 <----------DOF2                <---------MYB46(3)     <---------YAB1        --------->MYB52(2) ---------ANAC58                --------->MYB55(2)  <---------AHL20(2)   <---------ZAT6             - ---------ANAC58            <---------AtMYB61  --------->ARR14(2)<-----------RAV1(1)  <---------ANAC58   ttgctttatggtttcactatggtgtttgtattggtggtttgttgatacgaatatgttattgttcctcatgttgcagtgttagtttttgacttgagagttt  17101400  Previous    Next  AGI:  At1g45170.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G42960.1); similar to pore protein of 24 kD (OEP24) [Pisum sativum] (GB:CAA04468.1) Range:  from: 17098420    to: 17100446    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g45180.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G42940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61373.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 17100931    to: 17104336    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.