Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                  <--                                                                                                  <--                                                                                                <----          --------->ICU4                                                                      <------       <---------AHL20(2)                                                                     -------       --------->AHL20(2)                                                                    <-------   <---------ICU4                                                                            --------   <---------AHL20(2)                                                                      --------->YAB1   --------->AHL20(2)                                                                      --------->ATHB51   --------->ATHB51                                                  --------->YAB1        <--------HAHB4  --------->ICU4                                                    --------->AHL20(2)     -------->ATHB1 ------->AHL20(2)                                               --------->AHL20(2)         <---------ICU4 --------AHL20(2)                            <-----------GT1 --------->YAB1               --------->ICU4 -DOF2--------->AHL20(2)                ----------->GT1   ---------->DOF2                 <---------YAB1   tttaattatttaattatgtagtttctctcaaaattttgttaatggtataactatttgatacaaagataaaataaaaatcaaactcaaatagaattattat  16972300                                                                                                <----    <-----------RAV1(1)                                                                     <-------- --------YAB1                                                                               <-------- -------AHL20(1)                                                                     <---------WRKY12 -------AHL20(2)                                                                    --------->WRKY18(1) -----YAB1                                                                        <---------DEAR3(2) ---ICU4        <----------ID1                                                   <---------DREB2C(2) -->YAB1      ---------->DOF2                                       ----------->GT1<--------ZAP1----- --YAB1   <---------HSFB2a(2)                                  <---------YAB1    --------->ETT(1)---- ->ICU4   --------->HSFB2a(2)      ----------->HVH21  <-----------GT1         <-----------RAV1(1)<---   tattttttgttgctagaaaagacaaaacaaaaactatttgacatgttatgcaatttatacaagttatgaaatgttattttttgtcggtcaaatttttatt  16972400                                                                          --------->HSFB2a(2)         --------->WRKY38(1)                                              <---------HSFB2a(2)<------- -----AHL20(2)                                             <---------AHL20(2)                <------- -YAB1   --------->WRKY12                                 <---------AHL20(1)                 <------- -AHL20(2)<---------WRKY18(1)                             --------->AHL20(2)           <---------YAB1 ---->AHL20(2)                                            <---------AHL20(2)        <---------AHL20(2) ----->AHL20(2)                     ------>ZmHOX2a(1)     --------->AHL20(1)     --------->AHL20(1) ------AHL20(2)           <----------DOF2              --------->YAB1  <----------DOF2<---------AHL20(2)   aatttagcatgttgacccaaaaaaaactctttgacatcctatagcaatgtcaaactaaaataaaattgcataactttcagaagtatattattttggctta  16972500                                                                   <---------ANAC58                                                              <---------ICU4               <---------AHL20(2)                            <---------YAB1 <-----------GT1   --------->AHL20(2)                                        --------->ICU4<---------AHL20(2) --------->TOE2(3)      --------->AHL20(2)            <---------YAB1<-------GAMYB --ANAC58     <---------AHL20(2)                    --------->YAB1 <---------ANAC46               --- --ANAC58     --------->AHL20(2)                   <---------YAB1  <---------ANAC58      <------NtERF2 --ANAC46 <------ZmHOX2a(1)                      <---------------AGL15     --------->AHL20(2)   <----   aaacattaaacaggaataaaatttgataaaatatgtctatgggccataaaactattataagagataattgcgttgatttaaacacttgggccgaattagt  16972600                                                                                                   *TSS                                                                                                   <-                                                                                                  ---                                                                                                 ----                                                                                               ------                                          ------>NtERF2                                        <-----                                         --------->ANAC46                                     <------                ------->MYC2            <---------LBD16                                       <------                <-------MYC3          <-----------GT1                                         -------                ------->MYC3  ------------>CBF                            <---------ZAT14  <---------                <-------MYC2  <------NtERF2                      <---------ATHB12      <---------GLK1(2)       --------->SPL7  <------------CBF>>>>>>>>>>E2Fb        ------------>CBF    <---------ZAT18<---- ------->DOF2  <---------At4g35610   <-----------GT1        --------->ANAC58     --------->ZAT18<---- -----ZAT6  <-------TEIL     ------>NtERF2--------->LBD16   --------->ANAC58<------------CBF<--------   gaaagcccatacgatgcatatgccaaattggcgccaatatttcccgcctaatcgacgagagaacccaataaacgagtgtattgtgccctgattctgtcgc  16972700 -----NtERF2                            --------->KAN4(2) ------>LBD16                          <---------HSFC1(2) ----->LBD16                           --------->HSFB2a(1) >NtERF2                               <---------HSFB2a(1) ----RAP2.3(1)                         --------->HSFC1(2)             --------->REM1(1) ---DEAR3(1)                     <------NtERF2                    --------->ZAT2 ---ETT(2)                       ----------->GT1        <---------RAP2.6(3) -->ETT(2)                      --------->LBD16        --------->DEAR3(1)        <---------At4g35610 --RAV1(1)                     <---------ANAC58        --------->RAP2.3(3)       --------->LBD16 -----LBD16                    <---------ANAC46        --------->RAP2.3(2)       --------->At4g35610 --NtERF2                      <---------ANAC58 <---------DOF5.7(2)   <---------ALFIN1 ---HVH21      ---------->DOF2<---------LBD16 --------->DOF5.7(2) --------->At4g35610             <--   cggaaacaatacacagatagagcgagagaaatggcgggagaaaattccgataacgagccgtcttcaccagcttcaccttcttccgctggattcaacacag  16972800                                                                      --------->ANAC58                 --------->ANAC58                                     --------->ANAC58                 --------->ANAC58                                 --------->ANAC58             ------          --------->YAB1                                          --------->ANAC58      ----------->HVH21          <---------ICU4                                --------->At4g35610     --------->CCA1(2)         <---------ATHB12                               <---------ZAT2--------->bZIP60(2)      <-----        ------>MYB83                                    <---------At4g35610<---------YAB1--------->MYB52(1)        ------>MYB46(1)                                 --------->ZAT2--------->ANAC46  ----------->TGA1       --------->WOX13(1)    --------->LBD16    >>>>>>>>>TBF1  <---------ARR14(2)     ----------->RAV1(2) ----ZmHOX2a(2)  --------->ANAC46        --------->At4g35610   --------->ARR14(2)    ------->TEIL   atcagttaccaatcagtacaagccaaaactccgaaaatttctccgatgaagaagaagcagctgtagatacccaagtcattagagatgagcctgacgaagc  16972900                                    <---------ATHB12                            ------>ZmHOX2a(2)                           --------->GLK1(1)                           <---------GLK1(1)                          <---------AGP1  <----------DOF2                          --------->ARR14(3)                          <---------ARR14(3)                          --------->ARR11(3)                          <-----------ARR10                          <---------ARR14(2)                    ===============HOX2a_HOX2a           >>>>>>>>>TBF1  <---------ARR11(3)        >>>>>>>>>TBF1     --------->ARR14(2) =================================HOX2a_HOX2a ==================================HOX2a_HOX2a <------ZmHOX2a(1)  ==============HOX2a_HOX2a           --------->MYB52(1)  --------->YAB1 --->At4g35610      <------ZmHOX2a(1)--------->YAB1   <---------YAB1       --------->ICU4 ----At4g35610>>>>>>>>>TBF1<------ZmHOX2a(2)   <---------YAB1             <---------KAN4(2)   ggaggatgaagaagaagaagaaggagaagatctcttcaatgatacttttatgaacgattatcggaagatggatgagaatgatcagtatgagtctaatgga  16973000                                                                     ------>ZmHOX2a(2)                                                         <---------ZAT2                                                         <---------At4g35610                                          <---------ANAC58 ----------->TGA1                                          <---------ANAC58 ----------->HVH21                                        <---------YAB1   --------->At4g35610                                   --------->ANAC58      --------->ZAT2                                 <-----------RAV1(2)     ----------->RAV1(2)                   ---------->DOF2 --------->ANAC58   <---------At4g35610                 <---------YAB1<-----------HVH21   <---------ANAC58--------->ARR11(3)               --------->YAB1--------->MYB59 <---------WRKY18(1)   <---------ARR11(3)            <---         --------->LBD16     <---------TOE2(3)     <---------ANAC58<---------ARR14(2)         <------        <---------ANAC46  --------->CCA1(2) ----------->HVH21  <---------At4g35610            <------   atagatgattccgtcgatgatgaaagagatttaggtcaggctatgcttgaccgtcgtgctgctgacgctgatcttgatgctcgtgaaaatcgacttgcga  16973100                                            --------------->AGL15                                           <-----------------AG                                           ----------------->AGL2                                       <---------AHL20(2)                                     <---------YAB1                                   <--------HAHB4                                   -------->HAHB4                                   --------->ATHB51                                   --------->YAB1                                   -------->ATHB1                                   <---------ICU4                                   <---------AHL20(2)                                  <---------ATHB51    <---------HSFB2a(1)           --------->ICU4    <---------HSFC1(2)            <---------YAB1      --------->ARR14(2)    --------->HSFB2a(1)         >>>>>>>>>GT-2         <---------ARR14(2)              ---------------    --------->HSFC1(2)        --------->At5g28300     --------->GLK1(2)           --------->ZAT18    <---------ZAT2           ------->GAMYB <-----------------AGL1                 <---------ZAT14    --------->ZAT2        --------->MYB52(1)--------->TOE2(3)                     --------->ZAT14   --------->ANAC58       <---------DOF5.7(2)        <---------GLK1(2)   --------->TOE1(3)   --------->ANAC58     --------->DOF5.7(2)========================================================== ------ARR14(2)       --------->ANAC46--------->AHL20(2)                 --------->TOE2(3) ---ANAC58           <-----------------AGL1<-----------------AGL3     --------->GLK1(1) ---ANAC58------>ZmHOX2a(1)  ----------->GT1<---------------AGL15     <---------GLK1(1)   atcgcaagcttcctcatcttcttcacgataacggtaattattaaatccctaattggaatctggcgaaattggaaaccctaaatgttcactgattttggga  16973200  Previous    Next  AGI:  At1g44900.1    Description:  ATP binding / DNA binding / DNA-dependent ATPase. similar to DNA replication licensing factor, putative [Arabidopsis thaliana] (TAIR:AT2G16440.1); similar to minichromosomal maintenance factor [Triticum aestivum] (GB:AAS68103.1); similar to MCM protein-like protein [Nicotiana tabacum] (GB:BAC53939.1); similar to minichromosome maintenance factor [Lactuca sativa] (GB:ABS87383.1); contains InterPro domain MCM protein 2; (InterPro:IPR008045); contains InterPro domain MCM; (InterPro:IPR001208); contains InterPro domain Nucleic acid-binding, OB-fold (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold-like (InterPro:IPR0160 Range:  from: 16972699    to: 16977081    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.