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Chromosome 1
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Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
DAG2
--------->
AHL20(2)
---------->
DOF2
<---------
AHL20(2)
-------
<---------
ATHB12
<---------
AHL20(2)
<---------
STY1(2)
<------
--------->
MYB46(3)
--------->
AHL20(2)
--------->
STY1(2)
--------
-------->
P
<------
ZmHOX2a(1)
--------->
ZAT6
--------->
GLK1(1)
--------->
WOX13(1)
--------->
AHL20(2)
<------
ZmHOX2a(2)
---------->
DOF2
gaacatcaaccaataaagcaggac
ctataaattaaattcacagaaaccaatttcaaaaacgatcactagctacttaaaaaaaaaaaaaaaagagttccaa
16868600
--------->
WRKY18(1)
----------->
GT1
<-----------
HVH21
<---------
ANAC55(2)
--------->
YAB1
<------
ZmHOX2a(2)
--------->
YAB1
<---------
ARR14(2)
<---------
ICU4
<---------
TOE2(3)
-------->
HAHB4
<-------
TEIL
<---------
TOE1(3)
<---------
ATHB51
--------->
ALFIN1
<---------
YAB1
<---------
ARR11(3)
--------->
ICU4
<---------
ANAC58
<-----------
GT1
--------->
ARR11(3)
<---------
YAB1
<---------
ANAC58
-->
HSFB2a(2)
=================
HOX2a_HOX2a
--------->
YAB1
<---------
ANAC46
<---
---
HSFB2a(2)
<------
ZmHOX2a(1)
--------->
YAB1
<---------
YAB1
----------->
RAV1(2)
----
--------->
AGL3
--------->
ARR14(2)
--------->
YAB1
--------->
YAB1
--------->
AtLEC2
--------
aaatgtttac
cattaaggatttgaagatcaagtgaatcagtatcaaaaccagactcataataatggtcatggaaatggcctggtgcatcaacatgagttc
16868700
------>
ZmHOX2a(2)
<-------
TEIL
<---------
HSFB2a(1)
<------
ZmHOX2a(2)
<---------
HSFC1(2)
<---------
ARR14(2)
--------->
HSFC1(2)
<---------
ZAT14
--------->
ARR14(2)
---------->
DOF2
--------->
ZAT14
--------->
CCA1(2)
--------->
ANAC58
--------->
ZAT18
<---------
ARR11(3)
--------->
ANAC46
------
HSFB2a(2)
--------->
ARR11(3)
--------->
ANAC58
------>
ZmHOX2a(1)
----->
HSFB2a(2)
--------->
HSFB2a(2)
<---------
LBD16
--------->
HSFB2a(1)
->
GLK1(1)
<---------
HSFB2a(2)
--------->
MYB52(1)
--------->
ZAT18
<----
cagagtgaacagatagttccatcttcgagatattagcatcggatccattcttcatactcacggcaagtctaagaaagttccctagtccttctgaagactc
16868800
--------->
REM1(2)
--------->
ARR11(3)
--------->
ZAT18
<---------
ARR14(2)
--------->
ZAT14
--------->
ARR14(2)
<---------
ANAC46
<---------
CCA1(2)
<---------
ANAC58
<---------
ANAC58
<---------
ANAC58
<---------
ANAC58
------>
NtERF2
<---------
ANAC46
--------->
LBD16
<---------
bZIP60(1)
<---------
LBD16
--------->
bZIP60(1)
--------->
At4g35610
--------->
At4g35610
<---------
GLK1(1)
<---------
At4g35610
--------->
ANAC46
<---------
At4g35610
<---------
ANAC46
<-----------
GT1
--------->
LBD16
<---------
At4g35610
--------->
LBD16
<------
MYB46(1)
<
--------->
ANAC46
<------
NtERF2
<---------
ARR11(3)
<------
MYB83
--
--------->
RAP2.6(3)
<---------
MYB46(3)
<-----------
HVH21
<---------
AtMYB61
<-
--------->
DEAR3(2)
<-----------
RAV1(1)
<----------
DOF2
<---------
WOX13(1)
<-
-------------
AGL1
<---------
ZAT14
----------->
GT1
--------->
ANAC46
<---------
ARR14(2)
<---------
ZAT6
ccaaaccggcaactccggcgtgtactggtggctgatgtcgtatatcttcctttctccgtcataaacttcatggtggattggttttacgtcgtagtgttgt
16868900
---------
<---------
YAB1
--------->
ICU4
--------->
YAB1
--------->
YAB1
<---------
ICU4
--------->
TOE2(3)
--------->
ICU4
----------->
GT1
--------->
YAB1
<---------
YAB1
<---------
ZAT6
--------->
At4g35610
<---------
TOE1(3)
--------->
ZAT18
----------->
HVH21
------>
NtERF2
--------->
ZAT14
-------
GAMYB
<---------
DEAR3(1)
<---------
ZAT14
------->
MYB52(2)
----------->
HVH21
<---------
WOX13(1)
----------->
GT1
--------
ANAC58
<---------
ZAT6
<-------
TEIL
<---------
TOE2(3)
--------->
ALFIN1
<--
--------
ANAC58
--------->
ALFIN1
---------->
DOF2
<------
NtERF2
<---------
YAB1
<------
ZmHOX2a(1)
-------->
HAHB4
ttcgttgcgacgctgaaggtagtgggaattgaagggaaagcttcatcgacggcgaaggttatgttaattgaagagaaggagagtgtagtgataatgataa
16869000
<---------
TOE2(2)
<---------
SPL7
--------->
YAB1
<---------
YAB1
-------->
HAHB4
<---------
ICU4
<--------
HAHB4
--------->
YAB1
--------->
ICU4
<---------
TOE1(2)
--------->
YAB1
<---------
ZAT6
----------->
GT1
<---------
MYB46(3)
<---------
YAB1
----------->
GT1
<-
<---------------
AtSPL3
<------
MYB83
*
TSS
<---------
YAB1
<---------
AHL20(2)
--
<---------------
AtSPL8
<------
MYB46(1)
<------
MYB83
--------->
AHL20(2)
---
--------------->
AtSPL8
----------->
GT1
<------
MYB46(1)
<---------
YAB1
<---------
YAB1
<--
>
YAB1
<-------
TEIL
<---------
ANAC46
<---------
MYB46(3)
--------->
AHL20(2)
-----------
----
ZmHOX2a(1)
<-----------
HVH21
>>>>>>>
ZML2
--------->
TOE2(3)
--------->
YAB1
<---------
YAB1
-----
ggagatggtacat
tattatgggtcgtaggttacaacggttctagt
gggtatcattaatctatagttgataatattatatagtattaataatagagaaata
16869100
<---------
YAB1
<---------
AHL20(2)
--------->
AHL20(1)
<
--------->
AHL20(2)
<-----
<---------
AHL20(1)
------
--------->
YAB1
<---------
AHL20(2)
<-----
<-----------
GT1
--------->
AHL20(2)
<------
--------
ICU4
<---------
AHL20(2)
-------
------->
YAB1
--------->
HSFB2a(2)
<---------
AHL20(2)
------>
ICU4
<-----------------
AGL1
--------->
AHL20(2)
--------->
ICU4
-------
YAB1
---------->
ID1
<---------
HSFB2a(2)
--------->
AHL20(2)
>
GT1
<------------
CBF
<---------
MYB52(1)
<---------
LBD16
--------->
ICU4
---->
YAB1
--------->
GLK1(2)
<---------
ZAT6
--------->
YAB1
<------
ZmHOX2a(1)
ataataacaaattgggttttgagtttggagaaactgtttgtctcatagtggtattatctggaattaaaatattatttgagtttggaggaatatttattaa
16869200
<---------
ANAC46
<---------
ANAC55(2)
<---------
ANAC58
<---------
ICU4
--------->
ANAC58
--------->
YAB1
<---------------
AGL15
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
--------->
ANAC58
<---------
ATHB51
------->
MYC2
--------------->
AGL15
--------->
ICU4
------->
MYC3
----------------->
AGL2
---------
AHL20(2)
<-------
MYC2
----------------->
AGL1
----
AHL20(1)
--------->
ANAC55(2)
<---------
At4g35610
--------->
ANAC58
---------
--->
AHL20(2)
<---------
ANAC58
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
----------
----
AHL20(2)
-------->
HAHB4
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
<---------
WOX13(1)
<---------
YAB1
---
AHL20(2)
<---------
YAB1
<-------
MYC3
--------->
KAN4(2)
--------->
ANAC58
----------->
HVH21
-->
AHL20(2)
--------->
ICU4
------->
MYC4
<---------
YAB1
---------->
DOF2
----------->
TGA1
atttttatgaaataatgatgcgtaaacatgtgcgatgtaagatgattcccaaacaagaaagtcacacaagattgatatagatgacgaagatgataaagta
16869300
<-------
TEIL
<-----------
GT1
<---------
YAB1
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
<---------
MYB46(3)
>
DAG2
<---------
DEAR3(1)
<---------
AHL20(2)
----------->
GT1
<---------
WOX13(1)
>
DOF2
---------->
DOF2
<-----------
GT1
--------->
ATHB12
<---------
YAB1
<-----------
GT1
tttgactaagaaagcggtgcataatttacttcatttttttcgttacacaaactattggttatatttgcaatctcattgatcaagtttgtttatacgtttt
16869400
--------->
TOE1(2)
--------->
YAB1
--------->
ICU4
<---------
ANAC46
--------->
ALFIN1
<----------
DOF2
<---------
ANAC58
<---------
bZIP60(2)
<---------
ARR11(3)
--------->
ANAC55(2)
<---------
TGA1a
<---------
DDF1
<---------
ANAC58
<---------
O2
<---------
RAP2.6(3)
<---------
ANAC55(2)
===================================================
bZIP_DOF
--------->
AHL20(2)
<---------
ANAC46
------>
NtERF2
--------->
AHL20(1)
<---------
ZAT14
<---------
ANAC58
<---------
AHL20(2)
--------->
ZAT14
<---------
ANAC58
--------->
AHL20(2)
<---------
ANAC55(2)
<---------
GLK1(2)
<---------
ETT(1)
<----
taaaaaaaattgatgcgtaaacatgagattaagtgaagtgggatagaaagaatttcatattgggcatgccgacatcttttagttctatgactatttggat
16869500
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AGI:
At1g44542.1
Description:
cyclase family protein. similar to cyclase family protein [Arabidopsis thaliana] (TAIR:AT4G34180.1); similar to unknown [Populus trichocarpa] (GB:ABK95930.1); contains InterPro domain Putative cyclase (InterPro:IPR007325)
Range:
from: 16867410
to: 16869045
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.