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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                       <---------AHL20(1)
                       --------->ARR11(3)
             <---------AHL20(2)
        <---------AHL20(2)
        --------->AHL20(1)                                      ----------->GT1
        <---------ARR11(3)                                    ---------->DOF2
        --------->AHL20(2)                           --------------->AGL15
        --------->ARR11(3)                           <---------------AGL15
        <---------AHL20(1) <-----------GT1          ----------------->AGL2
  ----------->GT1      --------->AHL20(1)           ----------------->AGL3
--------TOE2(3)        <---------ARR11(3)          ------------------------>ANAC81
-----YAB1   --------->AHL20(2)          --------->AHL20(2)---------->DOF2
 
taatgtagtaatatattaaatattgatatatttctatatcaaatttaaaactaaaaccaaaaaaagaaagaaaaatttctatatcaaatttagaactaaa  16619200
                                           <----------DOF2
            <-----------HVH21           ------>MYB46(1)
           <---------ZAT6             <---------MYB59                                       <-------
    --------->AHL20(2)             <-----------GT1                       <---------ANAC46   --------
   --------->YAB1             <----------DOF2<-----------GT1           <---------ANAC46    <--------
  --------->AHL20(2)  <---------MYB52(1)------>MYB83          --------->ZAT6               <--------
 
aacaaataaaaatagtgtcatttccattatgttcttttaaaccaaactttacattctaagaaaaaacactattgatgtgtatattaaacttttgatatct  16619300
                                                                                      ----------->GT1
                                                                             --------->AHL20(2)
                                                      --------->YAB1         <---------AHL20(2)
                                                      <-----------GT1        --------->AHL20(1)
--ARR11(3)                ---------->DOF2          --------->YAB1           <---------ATHB12
->ARR11(3)       <---------TOE2(3)            ----------->GT1   --------->ZAT6        <----------ID1
-CCA1(2)         <---------TOE1(3)       <---------YAB1       <-----------GT1<---------AHL20(1)  <--
-GLK1(1) <----------DOF2<---------AHL20(2) <---------AtLEC2 --------->AHL20(2)    ---------->DOF2---
 
ttctaaatcaaacttttcttaaggtatttaaaagtgatagtattctgaatggaaaaataacaatttaacactaaaaccaataaaataaagagaaaaatgt  16619400
                                                           <-----------HVH21
                            <---------YAB1                --------->bZIP60(2)        >>>>>>>>>TBF1
                          ----------->GT1               <---------ANAC58          >>>>>>>>>TBF1
---------RAV1(1)        <---------GLK1(2)               <---------ANAC58       >>>>>>>>>TBF1
------>MYB52(2)--------->AHL20(2)                  --------->HSFB2a(2)  <----------DOF2
 
ttgtggctaacaaaaaaaaaaaatccagattgtgattacaaaaaaaaaacatttctagggcatgtcattgacttcctttgaagaagaagaagaagagaga  16619500
                                                                      --------->ZAT18
                                                                   --------->ANAC58
                                                                --------->LBD16
                                                                <------NtERF2
                                                               --------->ANAC58
                                                               --------->ANAC46
                                                               --------->ANAC58
                                                              <---------LBD16
                                                           <---------ANAC58
                                                           <---------ANAC58
                                                           <---------TGA1a
                                                           --------->TGA1a
                     ================================================bZIP_DOF
                     ---------->DOF2                       --------->bZIP60(1)
               ----------->GT1             =================================HOX2a_HOX2a
              --------->DAG2               <------ZmHOX2a(2)<---------SPL7 --------->ZAT14
             ---------->DOF2      --------->AHL20(2)       =========================================
         <----------ID1       --------->AHL20(2)      <---------ICU4 <------ZmHOX2a(1)     *TSS    <
       ---------->DOF2       ----------->GT1     ------------>CBF  --------->ANAC58 <---------------
 
gagagactgaaaaagaaaaagtaagaaagggaatgaaataaatccgatcgaatacaattttgacgtccgcaaggacactattctctctcttctcatcttc  16619600
                                                                             <---------AHL20(2)
                                                                         --------->ICU4
                                                                  ----------->GT1
                                     <------ZmHOX2a(1)           --------->DAG2
==========bZIP_DOF                  --------->ANAC46       <---------------AGL15        --------->LBD16
----------DOF2         --------->ZAT14                    --------->TOE1(3) --------->AHL20(2)
---------ANAC81        <---------ZAT14        <-----------GT1  ---------->DOF2--------->YAB1
 
ttctttctctcttctctctctctctctacagcgaagaacaggacacaaattactctgtgaagcttaaaaaggtataatttttaataaaacccagaaacta  16619700
             ----------->GT1
            <------NtERF2
         <---------At4g35610
         --------->At4g35610
         <------NtERF2
         --------->ATERF1(1)
        ----------->RAV1(1)
        <---------RAP2.3(1)
        ------>NtERF2
       <---------RAP2.3(2)
       <---------RAP2.6(2)
       <---------ATERF1(2)
       <---------DEAR3(1)                                ---------->ID1                  --------->TOE1(3)
       --------->ATERF1(2)                               <---------CCA1(2)        --------->YAB1
      --------->RAP2.6(3)                    <----------DOF2 <----------DOF2      --------->AHL20(2)
   --------->HSFB2a(2)                <------------------------ANAC81        <---------ATHB12-------
   <---------HSFB2a(2)           <----------DOF2 ---------->ID1     --------->LBD16      --------->TOE2(3)
 
caatttctaggcggcagagaaaatttgtttctacttctttttgtttctctttgtcttctcgtctctttatccccaaacccatcaataaaaaaccctaaaa  16619800
                         <---------At4g35610
                         --------->At4g35610
               <---------ARR11(3)                    ---------->DOF2
               --------->ARR11(3)                 <---------ANAC46
               --------->ARR14(3)       <---------RVE1(1)                  <---------GLK1(2)
               <---------GLK1(2)       --------->ARR11(3)        <---------DAG2
--->DOF2       <---------ARR14(3)      <---------GLK1(2)         <----------DOF2 <----------DOF2 <--
 
gacttcaaatttcttcaagattttgttcatcggaagttttcagatttttagttgtgtaaagtctcttcctttttgttcgattctctttgttttgagtctt  16619900
                                                                              <---------TOE2(3)
                                                                              <---------TOE1(3)  <--
                             <--------P            --------->YAB1      --------------->AGL15   <----
        <---------YAB1--------->AtMYB61        --------->ZAT6       <-----------GT1            <----
-------YAB1        <---------ALFIN1       <---------GLK1(2)   <---------MYB52(1)               <----
 
atcagagacttattcttcaattccacctctgggtaagtttctatagattctcactagtaatctctgttttttttctcaattagggtttgatcaaagtttc  16620000
                                                                                         ------>ZmHOX2a(2)
                                                                                        <------ZmHOX2a(2)
                                                                                       <---------AGP1
                                                                                       --------->AGP1
                                                                                       <---------ARR14(2)
                                                                                       --------->ARR14(2)
                                                                              <---------------AGL15
                                                                              --------------->AGL15
                                                                             <---------ANAC58
     <----------DOF2                             <---------MYB46(3)          <---------ANAC58
  <-----------GT1                            <---------AtMYB61               <-----------------AGL3
-------MYB52(1)                              --------->DAG2             --------->ARR14(2)
-----ANAC58                     <----------DOF2 --------->ALFIN1        <---------ARR14(2)
-----ANAC58                  <---------YAB1  <---------TOE2(3)        ----------->ARR10--------->ARR11(3)
-----ANAC46    <---------MYB46(3)            <---------TOE1(3)     <---------ANAC46    <---------ARR11(3)
 
gtttttttctttctgggtttgttcttaacattatgcttttgttttgttaaggtggtgagagttggaaatggagtagatttgcttaatttagatctgtaag  16620100
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AGI:  At1g43850.1   
Description:  SEU (SEUSS); transcription cofactor. Identical to Transcriptional corepressor SEUSS (SEU) [Arabidopsis Thaliana] (GB:Q8W234;GB:Q8GXE8;GB:Q9MAR3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G62090.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G62090.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO60899.1)
Range:  from: 16619592    to: 16624489    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.