Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <------MYB46(1)            --------->At4g35610                                                            <------MYB83 --->ZmHOX2a(2)                                                                           <---------- ---ZmHOX2a(2)                                                                            ----------- -----ARR11(3)                                                                         <-----------RAV1(1) -----ARR14(2)                                   --------->ATHB12           --------->AtLEC2 ---->ARR11(3)                          <---------ZAT6          --------->ZAT18        <---------YAB1 ---->ARR14(2)            --------->ZAT14       <---------YAB1  <---------ZAT18     <---------MYB52(1) ->DOF2  ---------->DOF2  <---------ZAT14 ---------->DOF2   <---------MYB52(1)    <---------MYB46(3)   tcccaatgccaataagctccattacaactatagtgaatgttagtgaaagtatgatttcaacccttatgcactatttccatgcagtcgttatgttggtaca  12203500         ----------->HVH21        ------>ZmHOX2a(2)       <------ZmHOX2a(2)       --------->At4g35610      --------->ARR14(2)      <---------ARR11(3)      --------->ARR11(3)      <-----------ARR10      --------->GLK1(2)         ------>MYB83      <---------ARR14(2)        ------>MYB46(1)      <---------AGP1            --------->MYB52(1)     <------ZmHOX2a(1)        <---------MYB46(2)   <---------TOE2(3)          --------->MYB46(3)                  <-------TEIL                 ------ -----AtSPL8             <-----------HVH21                  ----------->ARR10                <------- ---->AtSPL8         ---------->DOF2                 ---------->DOF2                 --------->MYB46(3)   aaattgaggatctgaaggcatttgaaaggtcaccaaacagtctctctgagaaacatgaagcgaagaaattcatatttagtcaatagaaccactgagccgg  12203600                                  <---------AHL20(2)                                  --------->AHL20(1)                                  --------->AHL20(2)                              --------->AHL20(2)                              <---------AHL20(2)                             --------->AHL20(2)                          ----------->GT1                          -------->HAHB4                          --------->ATHB12        --------->TOE1(3)--------->ICU4                                                            --  --------->ATHB12       <---------ATHB12                                                         ---  --------->YAB1    --------->ANAC58                                                              <--  <--------ATHB1    --------->ANAC46                                                    <---------ANAC58  <---------ICU4    <---------ANAC55(2)                                                 <---------ANAC58 --------->ICU4     --------->ANAC58  --------->ICU4                         --------->ANAC55(2) <--- <---------YAB1     --------->ANAC55(2)                                     <---------TOE2(3)   ----- <---------ATHB12 --------->CCA1(2)<---------AHL20(2)                <-----------------AGL1    ------ --->LBD16     <---------YAB1<---------AHL20(2)                  --------->HSFB2a(1)<---------MYB52(1) --LBD16--------->TOE2(3)<---------YAB1                 <---------YAB1   <----------DOF2<---------ANAC46   acaatgattacctcaacatgatacgaaatgattaaatttaatgagtagtagtagtattctaatacaaatgttccgatttatgtaacgttggcttgtatta  12203700                                                                           --------->AHL20(2)                                                                   ------>ZmHOX2a(2)                                                                  <------ZmHOX2a(2)                                                                 <---------ARR11(3)                                                                 --------->AGP1                                                                 <---------ARR14(3)                                                                 <---------ARR14(2)                                                                 <---------AGP1                                                                 --------->ARR14(2)                             <---------AHL20(2)                  --------->ARR11(3)                         <---------YAB1                          --------->ARR14(3)                     <---------ZAT14                            <---------CCA1(2) ------>HAHB4     <---------ANAC58                             ----------->ARR10 ------>ICU4      <---------ANAC58 <------MYB46(1)           <------ZmHOX2a(2) -------ATHB12    <---------ANAC46 <------MYB83             <-----------HVH21 ------TOE2(3)<---------ANAC58    --------->MYB59           --------->ARR14(2)                 ------ ---->YAB1    <---------ANAC58<---------AHL20(2)            <---------ARR14(2)     <---------AtLEC2 --->ICU4   <---------YAB1   --------->AHL20(2)        --------->MYB52(1)  <---------AHL20(2)  <-----   atgatgcatatgttatgcttgagtgttcttataaatttggtcgaacacttgaaatgtaaacggatcagatcttgtatttaattgtgcatgggctaaatta  12203800                                                                          --------->AtMYB61              <----------DOF2--------->DAG2         <---------MYB52(1)   <---------MYB52(2)          <-----------GT1 --------->YAB1            <---------ARR14(2)   --------->MYB46(3)       <----------DOF2   <---------ATHB12--------->YAB1          ---------->DOF2 --->AHL20(2)<---------DAG2 ---------->DOF2  --------->MYB59  --------->AHL20(2)<----------DOF2<----- ----AHL20(2)--------------->AGL15    --------->YAB1--------->ARR14(2)--------->ZAT18   --------->At4g35610   aatacttctcttttaccttttttgccaatgaaaagttgaataatagtaaggtccgataggcccattaaaaagcccacaaaccctttaatcagctatattc  12203900                         *TSS                       <---------ALFIN1                       --------->AtMYB61                  <-----------HVH21   ------>ZmHOX2a(1)       <---------At4g35610--------->AtMYB61                                             <---------AHL20(2)       --------->ZAT2  --------->ANAC46                                                --------->AHL20(2)       --------->ZAT14--------->MYB46(3)                          ---------->DOF2 <------NtERF2       --------->At4g35610<---------ALFIN1 --------->ZAT14--------->LBD16       <---------DEAR3(1) ------GT1        <-----------TGA1<-----------HVH21     <---------HSFB2a(2)   <-----------HVH21 -----   ccattccactgctcccaagtcgtcaccaccacttcccgtcctctctccagtcactgtttccgaagccctaaagttttcaaggtcgccgattaaatcacca  12204000                                                                         ----------->HVH21                                                                       <---------At4g35610                                         <------ZmHOX2a(1)             --------->At4g35610                                      <------NtERF2                    ----------->RAV1(2)                                    <---------ANAC46               ------>NtERF2                                    <---------DEAR3(1)          --------->ZAT14                                    <---------ANAC58            --------->SPL7                                ------->MYC3                    --------->REM1(2)               <----    <---------ANAC46            <-------MYC3                    <---------ZAT14                 -----    <---------ANAC58  --------->LBD16--------->LBD16           --------->ALFIN1                 -----    <---------ANAC58 --------->LBD16<---------ANAC58          ------->PIF5             --------->ANAC58   <------NtERF2    <---------LBD16<---------LBD16            --------->LBD16          --------->ANAC58 ----->DOF2 <-----------GT1  <---------ALFIN1                 <-------PIF5     ---------->DOF2 <-----   aaggaggcgtttttatactattcccggttcaacacatggcggaggaagaggttatcgctatccccgtgcagccatctgaccacaagcgcaagcttgagaa  12204100                                      <---------WOX13(1)                                    --------->ATHB12                                <------NtERF2           <------ZmHOX2a(2)    <---------ZAT2          --------->ARR11(3)   ------>NtERF2          --------->ARR14(3)   <---------ATERF1(1)          <---------ARR11(3)  <---------ATERF1(2)          --------->ARR14(2)  --------->DEAR3(1)          <---------ARR14(2)  <---------DEAR3(1)          <---------ARR14(3)  --------->ATERF1(2)                                     <-----------HVH21         --------->GLK1(1)   <---------LBD16                                      <---------ICU4         <---------GLK1(1) --------->ANAC58     <---------bZIP60(2)         --------->At4g35610        ----------->ARR10  --------->ANAC46     <---------ANAC58            <---------At4g35610   <---------ARR14(2)      --------->ANAC58  ----------->TGA1              ------->TEIL   --------->ARR14(2)    <---------ALFIN1  <---------ICU4               --------->ANAC46 -----ARR14(2)         ----------->RAV1(1) --------->YAB1               --------->ANAC58  <---------At4g35610 ---->GLK1(2)        --------->At4g35610--------->YAB1         <---------YAB1    --------->ICU4  ---- ---->ARR14(2)------>ZmHOX2a(1)<---------DEAR3(2)         <---------At4g35610    <---------YAB1 ----- ----GLK1(2)------>ZmHOX2a(2)--------->RAP2.6(3)<---------ANAC58        --------->ANAC58  --------->At4g35610   tctcgaatcggagatcctcgagcagcaacacgccggctcgattgataatgacgtttctgtagatgatgacaaaaacgcatctgattattgtcagccgaag  12204200                                                                                              <------                  <---------At4g35610                                                     <----------      <---------ANAC58                          <----------DOF2                       <---------ARR11(3)      <---------ANAC58          --------->MYB59<---------------AGL15     <-------TEIL --------->ARR11(3) ------->HVH21   ------->TEIL   <---------TOE1(3)                    <---------MYB46(3)<---------GLK1(1) ---->DEAR3(2) ---------->DOF2  <---------TOE2(3)                <---------AtMYB61---------->DOF2   cgaccgaagcttgacgatgaagctgttgatggtttaggtatgtctgattcctttcaaagtatggattttggtggatgcatatcgaaaagatttcaccttt  12204300                            <---------ANAC46                            <---------REM1(1)                         <-----------RAV1(1)                 <---------ANAC55(2)                 --------->ANAC55(2)                 --------->ANAC58                 <---------RAP2.6(2)                                                  <---------At4g35610                 --------->ANAC58             ----------->GT1                         --------->At4g35610                <---------At5g28300        --------->ARR14(2)                       --------->ZAT18                <---------LBD16            <---------ARR14(2)            --------->TOE1(2)   -------- ----DOF2       --------->RAP2.6(3)    <---------ANAC46         --------->ICU4  <------ZmHOX2a(1) -GT1          <-----------GT1       --------->ALFIN1     --------->ALFIN1    --------->ALFIN1   gttcttaatattcgttgttacggcattgtgttgtagggattgggggaactgtagaaaacagtggtgatgttgaatccaaggaggagggaactgagaaacc  12204400  Previous    Next  AGI:  At1g33680.1    Description:  nucleic acid binding. similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G10070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16270.1); contains InterPro domain K Homology; (InterPro:IPR004087); contains InterPro domain K Homology, type 1; (InterPro:IPR004088); contains InterPro domain Protein of unknown function GLTT (InterPro:IPR008165) Range:  from: 12203925    to: 12208678    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.