AthaMap

Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved TF binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
<-----------TGA1 <-----------HVH21 <---------PCF2 <---------ANAC55(2) <-------MYC3 <---------bZIP60(1) <-------MYC2 --------->bZIP60(2) ------->MYC3 --------->ANAC55(2) ------->MYC2 --------->ANAC46 ------->PIF5 =============================================bZIP_DOF --------->ANAC58 <-------PIF5 --------->ANAC58 <---------ANAC58 --------->O2 --------->ALFIN1 --------->TGA1a -------------->OsCBT <---------O2 --------->TGA1a <- --------->bZIP60(1) <---------TGA1a --- <---------TGA1a ------->MYC3 --- <-----------bZIP910(1) <-------MYC2 <------MYB83 ---- <-----------STF1 <-------MYC3 <---------HSFB2a(1) <--- <-----------HVH21 ------->MYC2 <------MYB46(1) <------ ------>ZmHOX2a(2) --------->ANAC58 <---------HSFC1(2) -------- --------->At4g35610 --------->ANAC58 <------ZmHOX2a(1) --------- <---------At4g35610 --------->KAN1 <---------ANAC46 --------- --------->GATA12 ----------->HVH21 <------NtERF2 --------- --------->ARR11(3) --------->DAG2 <---------MYB46(3) <---------LBD16 --------->ARR14(2) <------ZmHOX2a(1) <---------ANAC46 --------->HSFC1(2) <-------- <---------ARR11(3) <---------HSFB2a(2) =======================bZIP_DOF <-----------HVH21 <---------GATA12 --------->HSFB2a(2) ---------->DOF2 --------->ALFIN1 --------->DEAR3(1) ------>YAB1 --------->TGA2(2) --------->DOF5.7(1)<---------ANAC58 --------->HSFB2a(1)<-------- --ARR10 <---------ALFIN1 --------->DOF5.7(1)----------->GT1 <-----------HVH21 <---------ALFIN1 <---
gcatgatctgccacgtcatcaaactcgagaagagcgtcgaaggagggaaagtgacacgcgcgtgggtcgcgaggaaggttctcacaccgtctcggaacgg	12123200
<------NtERF2 <---------HSFB2a(2) --------->HSFB2a(2) <---------MYB52(1) <------NtERF2 <-----------HVH21 <---------SPL7(1) --------->DEAR3(1) <---------RVE1(2) --------->ATERF1(2) <---------GLK1(2) --------->RAP2.3(3) --------->ZAT2 <---------ATERF1(2) --------->At4g35610 --------->ATERF1(1) ----------->RAV1(2) --------->RAP2.3(1) <---------At4g35610 <------NtERF2 --------->LBD16 <---------ZAT2 ---------->DOF2 <---------ATERF1(1) ======================RAV -----NtERF2 ------>NtERF2 ========================RAV --->NtERF2 --------->ANAC46 <-----------RAV1(2) ------>RAP2.6(2) --------->DEAR3(1) <------ZmHOX2a(2) ----->ATERF1(2) <---------LBD16 <---------GATA12 --------->REM1(1) ------DEAR3(1) ------>ZmHOX2a(2) --------->ARR11(3) --------->ANAC46 ---DEAR3(1) <---------GLK1(1) <---------ARR11(3) --------->ANAC58 ->SPL7(1) --------->GATA12 --------->RVE1(2) --------->ANAC58 >ARR11(2) <---------GATA12 --------->ICU4 <-------GAMYB - >MYB52(1) <---------ARR11(3) <---------YAB5 <-----------RAV1(1) - >ARR14(2) --------->ARR11(3) --------->DOF5.7(1) <---------ALFIN1 <- -ARR11(2) --------->WRKY12 ----------->GT1 --------->KAN1 ------>NtERF2 -- -ARR14(2) <---------MYB52(1)---------->DOF2 ---------->DOF2 --------->GLK1(2) <--- ------ATERF1(2) <-------GAMYB ------>NtERF2 --------->YAB1 ----------->ARR10 <------
cggcaaagtcgtcgactcgccgttgatctccgccgtcgggaaagtagagaaatcgtaaagatcagctgagattctgttgctacgcctcgctcgcttcgtc	12123300
<---------AHL25(1) <-------TEIL <---------AHL25(3) <---------MYB52(1) --------->AHL20(2) <---------ALFIN1 <---------WOX13(2) --------->AtMYB61 --------->WOX13(2) --------->MYB46(3) --------->AHL20(2) -------->ANAC58 --------->AHL20(2) --------->CCA1(2) -------->ANAC58 ----------->HVH21 <---------ALFIN1 --------->ARR11(3) --------TOE1(2) ------>NtERF2 <---------ETT(1) <---------KAN1 <-------TEIL ----- ------->SPL7(1) --------->DREB2C(2) --------->ANAC46 --------->YAB1 --------->ARR11(1) < ------SPL7(1) --------->DEAR3(1) <-----------GT1 --------->ZAT6 <---------TOE2(3)<----- -----HVH21 --------->ANAC46 <---------DOF5.7(1)<---------AHL25(3)---------->DOF2 <-----
gcacgaccaccgttcatcaccgccatgactgtgtaacaagggttttttccgacacttaaattaaaactagaataagagttaaagatacagagagagagat	12123400
<---------ARR11(3) <---------RVE1(2) --------->ARR11(3) <---------GLK1(2) <---------RVE1(1) <-------TEIL <------NtERF2 --------->CCA1(2) <---------ICU4 <-----------GT1 <---------RVE1(2) ----------->GT1 <------ZmHOX2a(1)--------->LBD16 <----- ---->CCA1(2) --------->DAG2 <---------TOE1(3) <---------ANAC46 ------ ---------TOE2(3) --------->DOF5.7(1) ----------->GT1 ----------->ARR10 <----- ----RVE1(2) --------->ALFIN1 <---------TOE2(3)<---------LBD16 ---------->DOF2 ----GATA12 <------ZmHOX2a(1) <----------DOF2 --------->ICU4 <-----------GT1 <------ZmHOX2a(1)
ttgagatagatacagaggaggggagagagagaaggtgaagaggtttaaggagagagtaattttggcggagagattttccctctcaaaagttttggaggat	12123500
<---------YAB1 ----------->HVH21 -------->ZAP1 <---------WRKY18(1) <----------DOF2 --------->WRKY12 <---------DOF5.7(1) <---------ANAC46 --------->WRKY38(1) <----------DOF2 <---------LBD16 ----------->HVH21 --------->KAN1 <---------DOF5.7(1) <---------TOE2(3) <---------ANAC58 <---------At4g35610 <-----------GT1 <---------TOE1(3) <---------ANAC58 <-------TEIL <-----------GT1 --- ----ARR11(3) >>>>>>>>>>WRKY18 <--------P <---------AHL20(2) <--- --->ARR14(2) <---------WRKY18(1) *TSS <------MYB46(1) <-----------GT1 <--- ----ARR14(2) ---------->DOF2 <---------At4g35610 <------MYB83 --------->AHL25(3) ----
tttagggttttggggggtattgactaaaagcttgacttgaccgcttctgatgggggaaggaaggaaggtagatgctttttattttccttttctctactca	12123600
<---------TCP15(1) <---------PCF5 --------->TCP20 <---------ARR14(2) --------->TCP15(1) --------->ARR14(2) <------MYB83 <------MYB46(1) <---------ARR14(2) <---------DOF5.7(1) <---------TCP15(2) --------->ARR11(2) <----------DOF2 <---------MYB46(3) <---------ARR11(2) <---------DOF5.7(1) --------->HSFB2a(2) --------->ARR14(2) <---------DAG2 <---------HSFB2a(2) <-------GAMYB ------>NtERF2 <---------LBD16 <---------DEAR3(2) --------->ANAC58 <---------ANAC46 <---------MYB46(3) --------->ANAC46 <---------LBD16 --------->PCF2 <---------ARR14(2) --------->ANAC58 <-----------GT1 ------------>AGL15 --------->KAN1 <---------RAP2.6(2) <---------ALFIN1 <---------AHL20(2) --------------AGL1 ----------->RAV1(2)<---------DEAR3(1) <---------REM1(2) --------->AHL25(3) --------------AG <---------PCF2 --------->ARR14(2) <-----------GT1 <------------------------ANAC81 -------->CBF --------->ALFIN1 --------->KAN1 <----------DOF2 <---------DOF5.7(1)
ccaatttcgggagagagtgggtccccctgattccaaattcgaggcggtttcgatttctttttctccacgcctttttttgtttttatttgtttccctattt	12123700
<---------ARR14(2) <----------DOF2 --------->AHL20(2) --------->ARR11(2) ------>ZmHOX2a(1) <---------WOX13(2) --------->ARR14(2) <---------DOF5.7(1) --------->RVE1(2) --------->RVE1(2) --------->WOX13(2) --------->WOX13(2) <---------ARR11(2) --------->At4g35610 <---------WOX13(2) --------->RVE1(2) -- <---------At4g35610 ---------->ID1 ---------->DOF2 --------->ARR11(2) <--- <---------AHL20(2) <---------WOX13(2) ------>ZmHOX2a(1) --------->WOX13(2) <---------ARR11(2) <----------DOF2 --------->MYB59 <---------DOF5.7(1)--------->AtMYB61 ------>ZmHOX2a(1)<-------
tgttcgatttcttttatttcaataagttagctaattaagtccttttttgtcctcaataaaaccaaagctaattaagtcctatccattatccagttccgat	12123800
<--------ATHB1 --------->ICU4 --------->WOX13(2) <---------ATHB12 --------->KAN1 <---------GLK1(1) --------->ATHB12 --------->GLK1(1) --------->AHL20(2) <------ZmHOX2a(2) <---------AHL12(1) --------->RVE1(2) --------->AHL12(1) --------->ANAC46 <---------GATA12 <---------WOX13(2)--------->ATHB12 -------->P <---------AGP1 <---------YAB5 --------->WOX13(2)<--------ATHB1 --------->GLK1(2) --------->GATA12 --------->AHL20(2) --------->YAB5 <-----------ARR10 ------>ZmHOX2a(2) <---------AHL20(2) --------->ICU4 --------->HSFB2a(2) <---------GATA12 --------->YAB5 --------->ANAC46 ----- <---------ALFIN1 --------->KAN1 --------->GATA12 --------->YAB1 <---------AHL20(2) <---------AHL20(2) --------->HVH21 <---------HSFB2a(2) <---------ARR11(3) <---------YAB1 <---------ATHB12 ------KAN1 <---------ANAC46 --------->ARR11(3)<---------YAB1 <---------TOE2(3)--------->AHL25(3) --YAB1 <---------MYB52(1) --------->YAB1 <-------TEIL --------->AHL25(1) <---------YAB5
tgtgacaccttctgttttgtagaaattctaccccaataagatctctcagattcaatgatttttgttttaattaagttataggccaatgatttattagcaa	12123900
----- <---- ----- <---- <---- ----- <---- ----- <---- <---- ----- ----- <---------AHL25(3) --------->AHL20(3) --------->AHL12(3) <---------AHL20(2) <---------AHL20(3) --------->AHL25(1) --------->AHL25(3) <---------AHL25(2) --------->AHL25(2) <---------AHL25(1) --------->AHL12(2) <---------AHL12(2) <---------AHL12(2) --------->AHL20(1) <---------AHL12(3) <---------AHL25(3) <---------AHL25(2) --------->AHL25(2) --------->AHL20(3) <---------AHL20(3) <---------AHL25(3) <---------AHL25(1) --------->AHL25(2) <---------AHL25(2) --------->AHL25(3) --------->AHL25(1) <---------AHL12(3) <---------AHL12(1) --------->AHL12(1) --------->AHL20(2) <---------AHL20(2) --------->AHL12(3) --------->AHL12(1) --------->AHL25(2) <---------AHL25(2) --------->AHL25(3) --------->AHL25(1) --------->AHL12(3) <---------AHL12(1) <---------AHL20(1) --------->AHL20(2) <---------AHL20(2) <---------AHL25(1) <---------AHL20(3) --------->AHL12(2) <---------AHL20(2) --------->AHL12(2) --------->WRKY12 --------->AHL20(3) --------->TOE2(3) ----------->HVH21 <---------GLK1(1) <-----------GT1 --------->AHL20(2) --------->ANAC58 <---------ARR11(3) <---------WOX13(2)<---------AHL20(1) --------->ANAC58 --------->ARR11(3) --------->WOX13(2) --------->AHL20(2) --------->ANAC46 --------->AHL20(2) --------->AHL20(2) ----------->RAV1(1) <- <---------AHL25(3) <---------WOX13(2)<----------DOF2 <---------TOE2(3)<---------AHL12(2) ----->DOF2 --------->AHL20(2) ----------->GT1 --------->GLK1(1) <---------WOX13(2) <---------AHL25(3)
aagtccaaaacaaataaaaacacaccactgacccagttaaaatataagatttctttctatttttttagttaagaaaattacaacataaattattttattt	12124000
--------->RVE1(2) --------->AHL12(2) <---------AHL12(2) <---------AHL20(2) <---------AHL20(2) --------->AHL25(3) --------->AHL20(2) --------->AHL12(2) <---------AHL12(2) --------->AHL12(2) <---------AHL12(2) <---------AHL20(2) --------->AHL20(2) --------->AHL12(3) --------->AHL25(1) <---------AHL12(3) --------->AHL12(1) --------->AHL25(2) <---------AHL12(1) <---------AHL25(1) --------->KAN1 --------->AHL25(3) --------->ARR11(3) <---------AHL25(3) <---------ARR11(3) --------->AHL12(1) --------->AHL12(1) <---------AHL12(1) --------->AHL20(3) <---------AHL20(2) <---------AHL12(1) --------->AHL12(3) --------->AHL25(2) --------->AHL20(2) <---------AHL25(2) --------->AHL25(1) <---------AHL20(3) --------->AHL12(1) <---------AHL20(1) ---->AHL20(3) <---------AHL20(1) <---------AHL12(2) -----AHL20(2) <---------AHL25(1) --------->AHL12(2) ---->AHL12(3) --------->AHL25(3) <---------AHL20(3) -----AHL20(1) <---------AHL12(1) --------->AHL25(1) -----AHL20(3) <---------AHL25(2) <---------AHL25(1) ---->AHL25(1) --------->AHL25(2) <---------TOE2(3)--------->AHL20(1) -----AHL25(3) <---------AHL12(2) <---------YAB1 --------->AHL20(3) ---->AHL25(3) --------->AHL12(2) --------->YAB1 --------->AHL25(3) --------->YAB1 -----AHL25(2) --------->AHL12(2) <---------YAB1 <---------AHL20(2) <---------YAB5 -----AHL25(1) <---------AHL25(3) --------->AHL12(2) <---------AHL25(2) --------->At4g35610 ---->AHL25(2) --------->AHL20(2)<--------HAHB4 --------->AHL25(2) <---------ZAT2 ---->AHL20(2) --------->TOE2(3) --------->YAB1 --------->AHL20(2) <---------At4g35610 --------YAB1 ----------->RAV1(1) <---------YAB1 <---------TOE2(3) --------->ZAT2 --------
tatttttgtcagaaacaacataaattatttattatctattattaataagattaatgtgaataaaatattcgattagttcagcttggattaagcatactca	12124100

AGI:	At1g33415.1
Description:	other RNA
Range:	from: 12118972	to: 12126573	Orientation: Forward
Links:	TAIR MIPS AIP

AGI:	At1g33420.1
Description:	PHD finger family protein. Identical to PHD finger protein At1g33420 [Arabidopsis Thaliana] (GB:Q9C810); similar to MMD1 (MALE MEIOCYTE DEATH 1), DNA binding [Arabidopsis thaliana] (TAIR:AT1G66170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67097.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011)
Range:	from: 12120866	to: 12123556	Orientation: Reverse
Links:	TAIR MIPS AIP

Please cite the corresponding publications when using AthaMap.