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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
At4g35610
<-----------
GT1
<-----
--------->
HSFB2a(1)
<---------
ANAC58
<---------
YAB1
<---------
HSFB2a(1)
<--
---->
ARR14(2)
--------->
TOE2(3)
<---------
GLK1(2)
------
-----
ARR14(2)
--------->
YAB1
--------->
LBD16
<-----
-----
GLK1(2)
<---------
ARR11(3)
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
---->
ARR11(3)
--------->
YAB1
------>
ZmHOX2a(1)
<---------
ALFIN1
-----
ARR11(3)
<---------
HSFB2a(1)
--------->
ARR11(3)
--------->
HSFB2a(2)
------
>
YAB1
<---------
ANAC58
--------->
HSFB2a(1)
<---------
ARR11(3)
<---------
HSFB2a(2)
-------
tactcac
ttgcttatcgaattggctctggttttcaaaggttccatcaaaatcatcaatatcatcttcttcctcctccagaattttctgctcctctccagc
11333100
----------->
RAV1(1)
<------
NtERF2
--------->
LBD16
<---------
ATERF1(1)
--------->
ANAC58
--------->
RAP2.3(3)
--------->
DREB2C(2)
--------->
RAP2.3(2)
--------->
RRTF1(3)
--------->
RRTF1(2)
<---------
ATERF1(2)
<---------
DEAR3(1)
--------->
DEAR3(1)
--------->
ATERF1(2)
--------->
ATERF1(1)
<------
NtERF2
--------->
RRTF1(1)
--------->
ERF1
<---------
LBD16
--------->
ORA47(2)
--------->
RAP2.3(1)
<---------
ATERF1(1)
<---------
RAP2.3(1)
------>
NtERF2
------>
NtERF2
--------->
RAP2.3(1)
--------->
DEAR3(1)
<---------
ORA47(2)
<------
NtERF2
<---------
DEAR4(2)
--------->
At4g35610
<---------
RAP2.3(1)
----
<---------
At4g35610
<---------
RRTF1(3)
<---
<---------
ABI4(2)
<---------
RAP2.3(2)
<---------
ANAC58
----
ZAT2
--------->
ANAC58
<------
NtERF2
--------->
ARR11(3)
---------
HVH21
--------->
DAG2
<---------
MYB46(3)
<---
--->
At4g35610
---------->
DOF2
<-----------
RAV1(1)
--------
----
At4g35610
------->
GAMYB
<---------
GLK1(1)
<----------
DOF2
<---------
ANAC58
--->
ZAT2
------>
NtERF2
<---------
DEAR3(1)
<------
NtERF2
<xxxxxxxxxxxxxxxx
smallRNA(i)
--
---->
RAV1(1)
--------->
At4g35610
<---------
TOE2(3)
--------->
ANAC46
<---------
ARR11(3)
agtcgcagcgccggcaacagcaaaagcggcgctactagggtttctctcggcgttctcttcatcagcaacttccttttgttgggcaagagcttgtttcatg
11333200
------->
GAMYB
----->
ARR11(3)
--------->
At4g35610
------
ARR11(3)
<---------
ATHB12
--------
ARR10
--------->
ZAT2
<---------
HSFB2a(2)
->
YAB1
--------->
At4g35610
<------
ZmHOX2a(2)
----------->
GT1
---->
ZmHOX2a(2)
--------->
WOX13(1)
--------->
WOX13(1)
---------->
DOF2
----------->
TGA1
atcttctcgctcataccagcttcaatcaa
ctgcaaaaatacccaaattatcgatcaattgaaacattctaaaagcttgaaatttgaaaaaatgacgaaac
11333300
--------->
At4g35610
<---------
At4g35610
--------->
TGA2(2)
<------
NtERF2
<---------
ANAC58
<---------
HSFB2a(2)
<-----------
HVH21
--------->
LBD16
<------
NtERF2
------>
ZmHOX2a(1)
--------->
ATERF1(1)
<---------
ANAC46
--------->
RAP2.3(1)
<---------
ARR14(2)
<---------
ATERF1(1)
------>
ZmHOX2a(2)
<---------
DEAR3(1)
<---------
ZAT6
<---------
YAB1
==============
HOX2a_HOX2a
<---------
ANAC58
<---------
ANAC46
=====================================
HOX2a_HOX2a
<---------
ANAC46
<---------
ANAC58
------>
ZmHOX2a(1)
--------->
HSFB2a(1)
--------->
MYB52(1)
<---------
TOE2(3)
<----------
DOF2
<---------
HSFB2a(1)
----------->
HVH21
--------->
CCA1(2)
<---------
DAG2
--------->
HSFB2a(2)
--------->
HSFB2a(2)
<-----------
TGA1
<---------
ANAC58
<---------
DAG2
<---------
HSFB2a(2)
<---------
LBD16
--------->
ATERF1(1)
--------->
DAG2
tcac
cttttcctgtttctgatgggtttttggaacctttgatcgtttcctggaagaagcgacggaggcgtcatcggagataaaaggttgagtgttgacaat
11333400
--------->
TGA1a
<---------
TGA1a
--------->
ZAT2
=================
bZIP_DOF
<---------
ZAT2
=================
bZIP_DOF
<-----------
RAV1(2)
<------
NtERF2
--------->
ZAT18
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
---------->
DOF2
<---------
DEAR3(1)
========================================
bZIP_DOF
<------
MYB46(1)
--------->
SPL7
--------->
GLK1(2)
<-----------
RAV1(1)
--------->
RAP2.6(3)
<------
ZmHOX2a(1)
--------->
ANAC46
<------
ZmHOX2a(1)
<---------
LBD16
<---------
<----------
DOF2
<---------
MYB46(3)
----------->
HVH21
--------->
WOX13(1)
<---------
DAG2
------>
ZmHOX2a(2)
<------
MYB83
--------->
ANAC46
---------->
DOF2
--------->
LBD16
-------
tcgatctcgcttcttcgccat
tgttggtgaaagaacgatgttttccacaggacggcacaggtgagaaagagtagcaatccaggaatctaaaaccttttgt
11333500
----------->
GT1
<------
MYB83
<------
MYB46(1)
--------->
AHL20(2)
<------
MYB83
<---------
AHL20(2)
<------
MYB46(1)
<----------
DOF2
<--------
P
------->
TEIL
<---------
At4g35610
<---------
LBD16
--------->
ARR11(3)
<-----------
GT1
<---------
ARR14(2)
<----------
DOF2
<----------
DOF2
<---------
YAB1
------>
ZmHOX2a(2)
--------->
TOE2(3)
===================================================================
--------->
TOE1(3)
--------------->
AGL15
--------->
ANAC55(2)
--------->
ARR14(2)
-
DOF2
<---------
WOX13(1)
<---------
DAG2
<---------
GLK1(1)
<---------
ARR11(3)
---->
GT1
*
TSS
<---------------
AGL15
<---------
ANAC46
<---------
AGP1
<----
taaaaccctaattgattttgt
tttaaaaaaaaaaaacttttttgggtaaatggatttacgggttgggttattaaacttatggatctttaattcagcccat
11333600
------>
MYB46(1)
--------->
YAB1
<-----------
HVH21
=============================
HOX2a_HOX2a
<---------
YAB1
--------->
DAG2
------>
MYB83
<-
<---------
AHL20(2)
----------->
GT1
<---------
MYB59
==========
<---------
AHL20(2)
--------------->
AGL15
<---------
SPL7
------>
ZmHOX2a(1)
<------
ZmHOX2a(2)
==============================================
MADS_MADS
--------->
SPL7
--------->
ARR11(3)
-----
MYB52(1)
<-----------
GT1
<----------
DOF2
---------->
DOF2
<---------
MYB111(1)
<---------
WOX13(1)
taggcccaactatatttttatcatatgggtcatcttttttaagcagtgaaaagtgtcatacgacctacttcctactacatgtaagtttgatggatcatgg
11333700
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
<
<----------
ID1
-
--------->
ANAC58
---
--------->
ANAC46
<---------
TOE2(3)
------
--------->
ANAC58
<---------
TOE1(3)
------
------>
ZmHOX2a(1)
----------->
RAV1(1)
----------->
GT1
---------
<-----------------
AGL1
<---------
AHL20(2)
<---------
AHL20(2)
----------------->
AGL1
--------->
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
--------->
ANAC58
---------->
DOF2
<---------
AHL20(2)
<---------
AHL20(2)
--------->
ANAC58
--------->
AtMYB61
--------->
AHL20(2)
<----------
DOF2
------
TEIL
<------
NtERF2
<---------
PCF5
--------->
AHL20(2)
--------->
YAB1
------>
NtERF2
-----
=======================
HOX2a_HOX2a
<---------
AHL20(1)
<---------
YAB1
<---------
RAP2.3(3)
attcatggcaggcccggtcctacttggggaccaaagcaacaaaataatttttttaaggttattataaaacgtttcaaatttttgggggcttttttaataa
11333800
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(2)
---------
AHL20(2)
<-------
TEIL
-------->
AHL20(2)
<---------
ALFIN1
------>
YAB1
<----------
DOF2
----------->
RAV1(1)
--->
YAB1
--------->
AtLEC2
------>
NtERF2
<-----
--->
AHL20(2)
<---------
ANAC58
<---------
PCF5
<---------
ZAT18
>
YAB1
<---------
ANAC58
<---------
TCP16(1)
<-----------
GT1
---->
AHL20(2)
<---------
MYB59
<---------
AHL20(2)
--------->
PCF2
--------------->
AGL15
aaataatttgtttggggacctatttgaaactattttttcttgcaaaacttttgagaaaatttaggggccacattcatttatttctcttattagccccctt
11333900
--------->
ARR11(3)
<---------
ARR11(3)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
--------->
CCA1(2)
--------->
ARR11(3)
--------->
ATHB12
<---------
ARR11(3)
----------->
GT1
<---------
ANAC58
<---------
ANAC46
<---------
MYB59
--------->
AHL20(2)
<-------
<---------
ANAC58
<---------
LBD16
--------->
At4g35610
<---------
AHL20(2)
---------
------
HVH21
<-------
TEIL
<---------
At4g35610
--------->
AHL20(1)
<----------
cagggcttgccctgattcatgggtctcggataatagaacgagtagcatgagctaactatgtaagatataaaatattaaaatctatggataatatacgata
11334000
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AGI:
At1g31660.1
Description:
similar to unknown [Populus trichocarpa] (GB:ABK93690.1); contains InterPro domain Bystin (InterPro:IPR007955)
Range:
from: 11330937
to: 11333521
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.