Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          --------->ZAT14                                                        --------->ZAT18                                                        <---------ZAT14                                                        --------->At4g35610                                                        <---------At4g35610                                          ---------->DOF2                                      --------->RAP2.6(2)                                       -----                                 ---------->DOF2        <---------ZAT18  --------->REM1(1)      ----- -->GAMYB ------>ZmHOX2a(1)--------->GLK1(2)     ---------->DOF2      --------->TOE2(3)       <------ --->MYB46(3)             <---------GLK1(2) --------->ANAC58        ------->TEIL              ------- ----MYB52(2)             <---------ARR11(3)--------->ANAC58    --------------->AtSPL8        -------   aacctataaatcctttcaccaatttcaagattcttcaaagccgaacaagccgaaagagtgctcacaattgtaccttcatcaaacttcaaattgctctcct  11255300        <----------DOF2      --------->LBD16      --------->At4g35610                       --------->YAB1 ------>HVH21                ------>ZmHOX2a(1) ------>MYB46(1)                    --------->ARR11(3) ->ZmHOX2a(1)               --------->TOE2(3)  ------>MYB83                       <---------ARR11(3) ---At4g35610  --------->ANAC46               ----------->RAV1(1)        --------->ANAC46 -->At4g35610  --------->ANAC58      ------>MYB46(1)                     --------->ANAC58 ---->RAV1(2)  --------->ANAC58      ------>MYB83              -------->P--------->ANAC58   gactcatccgcttaaacacaccaatggcatcctcaaacctcccattaccaacataactagaaatcaacccattccaagaaacaacatctcgttgaggcat  11255400                                    <---------ATHB12                                              ---                                --------------->AGL15                                         <------                                --------->MYB46(3)                                         --------->ZAT2                                <---------------AGL15                                      <---------At4g35610                     ------>ZmHOX2a(2)                              <---------ANAC55(2)    <---------ZAT2                   --------->ARR11(3)                              <-------TEIL            --------->At4g35610                   <---------ARR11(3)                             --------->CCA1(2)  --------->ANAC58         <----------DOF2       ----------------->AG   --------->ATHB12     --------->GLK1(2) <-------         <---------DAG2 <---------CCA1(2)   <-------TEIL       --------->MYB59       --------->ANAC58   ttcatcgaacactttatgtgtgatctctatcttacccaatgaagcatacattcccatgagtgaattagatacataagaatcgaactcaagcccagctttc  11255500                                                                        --------->TOE1(3)                                                                       <---------O2                                                                       <---------ANAC55(2)                                                                       <---------ANAC46                                                                       <---------ANAC58                                                                       ----------->GT1                                                                       <---------ANAC55(1)                                          --------->MYB46(3)           <---------ANAC58--------->CCA1(2)                             <-----------GT1                       <-----------HVH21  <---------ARR14(2)                          --------->HSFB2a(2)                      <---------MYB52(1)<------ZmHOX2a(1)             <---------HSFC1(2)      ------>ZmHOX2a(1)             --------->DOF5.7(2)--------->ARR14(2)             --------->HSFC1(2)     --------->TOE2(3)          -------->P     --------->ICU4  <------ ------>ANAC46     <-----------GT1------>MYB46(1)              --------->MYB52(1) --------->YAB1 -----HVH21  --------->HSFB2a(1)  ------>MYB83               --------->MYB46(3)   <---------LBD16 ---DOF2    ------->TEIL  <---------HSFB2a(2)         <----------DOF2<---------DOF5.7(2)      <------   acagcataaccatgaaccttctcaccttctataaccttcctcaaacgaccaattgactttagaacaaccggtaacgtgaaattatcaggatacaatcctt  11255600                 ---------->DOF2              ------>MYB46(1)              ------>MYB83            --------->MYB46(3)         <-----------GT1                                                                            <  --------->ANAC46                        <-----------GT1                                           -  --------->ANAC58                     <----------DOF2                                              <  --------->ANAC58             <---------ANAC58                                                   <-- ------>ZmHOX2a(1)             <---------ANAC46                                                ------ ---ANAC58  --------->DEAR3(1) <---------ANAC58           --------->CCA1(2)          --------->ALFIN1 ---ANAC58 --------->ANAC46 <----------DOF2<---------At5g28300   --------->GLK1(2)   ----------->HVH21   gtcctcgcaattcaccgaacaaagccaaaactttcgtgaaacttttaccatcagcaagagatttgagcatcttattgtacataagaagtgatggagtttg  11255700 ---------MYB52(2)  <----------DOF2             ----------->GT1 -------->MYB46(3)--------------->AGL15    --------->YAB1               ---------->DOF2 ------------MYB.PH3(2)               --------->ARR11(3)       <----------DOF2 ---------GT1    <-----------------AGL2--------->ICU4      <---------ZAT18                 ---------- ----->GT1 <-------TEIL         --------->CCA1(2)  ---------->DOF2--------->REM1(2)  <---------YAB1   taacaaactcatgttcatgtctctttaggggatgatatgagataatgagaatgtaaagttgtgaactttgtagagaaagagagtcttattattcaaagtt  11255800                                                        --------->YAB1                                                       <---------YAB1                                                    <---------YAB1                                                    --------->ICU4                                                  <---------ICU4                                                  <--------HAHB4                                                  --------->YAB1                                               <---------ICU4                                              --------->ICU4                                              <---------YAB1                                            <---------ICU4                                           <---------YAB1  ----------->GT1                      -----    <---------MYB52(1)                     <------ZmHOX2a(2)                              <---------MYB59   <----------DOF2                        --------->ARR11(3)                            ------->TEIL   ------>ZmHOX2a(1)                  ---------->DOF2<---------ICU4                <------------CBF  --------->TOE2(3)              ---------->DOF2 <---------YAB1                   <------ZmHOX2a(1)-- >DOF2                    <-----------GT1 <---------ARR11(3)        <---------HSFB2a(2)<---------CCA1(2)   ccatcctttattttttaaaaatcaaattttactgaaaaagaaaagatcattatcattatcagagtaaattacagaagaaacagaggattgtatctaacaa  11255900                                                                                                  <--                                  -------->HAHB4                                                  ---          --------->ARR14(2)     <---------ATHB12                                                 ---          <---------GLK1(2)      <---------YAB1                                                  <---          <---------ARR14(2)     --------->ICU4                                            --------->ANAC58         <------ZmHOX2a(1)---------->DOF2                                    ---------->DOF2     ---- ----->DOF2            <---------ANAC46          <---------ZAT6     <---------ANAC55(2)    --------->ANAC46 --------->GT1       ------->GAMYB--------->ATHB12                 <-------TEIL            --------->ANAC58   aagataaaacaggattctcacaactgcgtaaagaaatgattcaagagtctagagttagactcatgttgatacataagaaaaaaggaagaaaacacacaaa  11256000                                                    --------->ATHB12                                                    --------->YAB1                                                   <---------YAB1                  <---------ARR11(3)                                            <---------ANAC58                       <---------ARR11(1)                     <-----------GT1        <---------ANAC58                       --------->ARR11(3) -------ICU4         <---------AHL20(2) <----------DOF2 <------MYB83              <---------CCA1(2) ------>ATHB12    <---------ICU4     --------->ARR11(3) <---------ANAC55(2)     --------->YAB1 ------>YAB1  <------ZmHOX2a(2)      <---------ARR11(3) <------MYB46(1)        <---------ATHB12 ------ATHB12<---------ARR11(3)      <---------ARR11(1) ----------->GT1        <<<<<<<<<ARR1    <---- ----->ICU4  --------->ARR11(3)     <---------CCA1(2)  --------->MYB59         <<<<<<<<<ARR2    <----   tcattactcttacaagatcatatttactcgtcgaaaacatatctttacttacgatgataggtaagaaggaagagaaacacaatcatatcttacacatact  11256100                                                                        <----------DOF2                                                                    <------NtERF2                                                                   --------->LBD16                                                                  --------->ETT(1)                                                                 <---------LBD16                   --                                                             <---------ANAC58                      --                                                             <---------ANAC58                   -----                                                         ------>ZmHOX2a(2)                    -------                                                        <------ZmHOX2a(2)                     <------                                    <---------AtLEC2   --------->ARR14(2)                    --------                                    <---------ANAC58   <---------ARR14(2)                    --------                   ---------->DOF2  <---------ANAC58   <---------ARR11(3)                   <-------TEIL        ------->TEIL                <---------ANAC46   --------->ARR11(3)                   --------- -----DAG2     ---------->DOF2   <---------MYB52(1)    <---------ARR14(3)                   ------->TEIL ------DOF2  <<<<<<<<<MYB98    <-----------RAV1(1)     --------->ARR14(3)                 <---------SPL7   ttttggtatgtatatgttaaagaaagggcatcactgttgcttggagtttgattccacgatcttgcttgccggagctttctcttgtttctctacgtacgca  11256200  Previous    Next  AGI:  At1g31430.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G22410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65604.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96949.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 11253917    to: 11255718    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g31440.1    Description:  SH3 domain-containing protein 1 (SH3P1). similar to SH3 domain-containing protein 2 (SH3P2) [Arabidopsis thaliana] (TAIR:AT4G34660.1); similar to Os03g0266700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049658.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP06881.1); contains InterPro domain Src homology-3 (InterPro:IPR001452) Range:  from: 11255817    to: 11258696    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.