Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------TOE2(2)                                                    <---------AHL20(2)                                                    --------->AHL20(2)                                            <---------At4g35610<---------TOE1(2)                    =                            <---------TOE2(3)   --------------->AGL15        <---------ARR14(2)     <                         <----------DOF2    --------->At4g35610<---------TOE2(3)        <-----------GT1                      <---------AHL20(2)<-----------HVH21--------->AHL20(2)  --------->ARR14(2)    <-   --------->YAB1     <-----------GT1  --------->YAB1<---------YAB1     <-----------HVH21          <-   tggaatcataaactagtttgatattaactttaggttttcaattgtcatctccattaaaattaacttaggttttctgtcatatactgtattttgctgtttt  10876400         ----------->HVH21       ===================================================bZIP_DOF       <---------ANAC58       --------->TGA1a       --------->bZIP60(1)       <---------bZIP60(1)       <---------bZIP60(2)       <---------ANAC58       <---------ANAC46                                                <---------ZAT18       <---------O2                                                    --------->ZAT14       --------->O2                                                    <---------At4g35610       <---------TGA1a                                              ------>ZmHOX2a(1) ================bZIP_DOF    ------>ZmHOX2a(1)               <--------P--------->At4g35610 ----------DOF2              --------->LBD16         <<<<<<<<<<<<<<<<<LFY      <----------DOF2 --------ANAC58            ----------->RAV1(2) ---------->DOF2<---------MYB46(3) --------ANAC58--------->TOE1(2)            --------->At5g28300 <---------ARR14(2)  <---------ANAC46   tgctttgtgtcgtgactcgtgcgatagactcctgagacaatgactcggtaaaagttgacattggtagttcctgtgctccctctttgacttggatgccaag  10876500                                                                                       <----------DOF2                                                                                  <-----------HVH21                                                                                ------->MYC2                                                                                <-------MYC2                                                                                ------->MYC3                                                                                <-------MYC3                                                                                <-------PIF5                                                                               <---------TGA1a                                                                               ======================                                                                               --------->ANAC55(2)                                                                               --------->ANAC46                                                                               ======================                                                                               <---------O2                                   ------>ZmHOX2a(1)                           ===================bZIP_DOF                                  --------->TOE2(3)                            ======================                                 ----------------->AG                          --------->O2                                 <-----------------AGL1                        --------->TGA1a                                 ----------------->AGL1                        ======================                            --------->AHL20(2)                           ================bZIP_DOF                            <---------AHL20(2)                     <---------ALFIN1    <---------DAG2                          --------->TOE2(3)                     --------->ANAC58------->MYC4                          <----------DOF2                ---------->DOF2 <----------DOF2                       --------->ARR11(3)     --------->ANAC58  --------->ANAC46<-------MYC4                       <---------ARR11(1)     --------->ANAC58  --------->ANAC58------->PIF5  <------      ------->GAMYB   <---------CCA1(2)  <----------ID1  ================================bZIP_DOF<---   ttttctaaccgaaattactaagtcaaatctttaattcctaaatgggccaagcccaaactaaaagacgcgctacctctttccacgtgtcactttttgttac  10876600     ---------->DOF2  --------->ETT(1)                        <---------AHL20(2) ---------->ID1                          <---------YAB1                                        ------ ===============bZIP_DOF              <---------YAB1                                           <----- ==========================bZIP_DOF  <---------ARR11(3)                                        <----- =======bZIP_DOF             --------->TOE1(3)         <-----------TBP                         ------ =====================bZIP_DOF       --------->ARR11(3)--------->AHL20(2)                  --------->YAB1 -----GT1  <----------DOF2   --------->TOE2(3)       <-----------TBP             ---------->DOF2----- -------DOF2    <----------DOF2  ---------->DOF2   <----------DOF2           ---------->DOF2  <------   tttgtcgcaaagtcttttctttttctcttaaccttaaaagataattaatgggcctttttatatagaggcccatttatctgaaagaaagcgaaatcaaaat  10876700                                                                                                 ----                                                                                                 ----                                                                                                 <---       ---------->ID1                                                                            <---   <----------DOF2                                                                           <-------   --------------------->WRI1                                                              <---------ANAC58 --->GLK1(2)                                                                               <--------- ------ARR10                                                          ------>ZmHOX2a(1)    ---------- ----ARR11(3)                                         ---------->DOF2--------->TOE2(3)     <---------ANAC58 --->ARR11(3)           ------>ZmHOX2a(1)   ----------->HVH21    --------->GLK1(1)       <-----------GT1 ---->RVE1(1)   <<<<<<<<<TBF1           ---------->DOF2      >>>>>>>>>TBF1              <-----------GT1 ---GLK1(2)<----------DOF2  ------>ZmHOX2a(1)----------->RAV1(1) <---------GLK1(1)------------>CBF   ctctcctttgtttctttcttcttctccttcctccataagacaagaagcgacagagggaaagaagaagaattcctaaaacccttgagcaattttccgtttc  10876800          <-----------------AGL1          --------->SPL7        <---------SPL7       <---------ANAC58       <---------ANAC58     ------>ZmHOX2a(2)    <------ZmHOX2a(2)   --------->ARR14(2)   <---------ARR14(2)   --------->ARR11(3)   <---------ARR11(3) ----->HSFB2a(2) ----->HSFC1(1) ------HSFC1(1)         --------->HSFB2a(2)                       <---------ATHB12 ------HSFB2a(2)        <---------HSFB2a(2)                  >>>>>>>>>>>>>>>>>LFY   --------->GLK1(1) --MYB52(1)        ---------->ID1                            <<<<<<<<<<<<<<<<<LFY   <---------GLK1(1) ------AGL15  <---------ARR14(2)--------->TGA1a         ---------->DOF2 <-----------GT1       <------ ----->AGL15  --------->ARR14(2)===================================bZIP_DOF <---------At4g35610   tagaagatcgcgtccggttttggcctctagacccatgtctgaaaacgtccctgatcaccaaagtaccaatggtttttcatcttccgatttctgtatattt  10876900                                 <---------GLK1(2)                               <---------YAB1                           <---------ARR14(2)                           --------->ARR14(2)                           <---------GLK1(2)                         <---------YAB1                       --------->YAB1                    --------->WOX13(1)    <---------YAB1         --------->GLK1(1)<------ZmHOX2a(1)------>ZmHOX2a(1)                                      --- ---AHL20(2) <----------DOF2--------->GLK1(2)                    <-----------GT1       <---------YAB1   ttgaaattggggtttctttagtcaattaggattctgattctgttcctattgctcccattcttcagtttcactatgttttcatgcttcttgttattgagtc  10877000                                                                                             --------                                                                                             --------                                                      --------->ANAC58                       <-------                                         --------->LBD16                                     <-------                                         ------>ZmHOX2a(1)                                   <-------    <-----------GT1        <----------DOF2    >>>>>>>>>TBF1      <---------MYB46(3)          <------- --->ZmHOX2a(1)   ------->TEIL     <---------MYB46(3) --------->ANAC58                <----------DOF2   ctcgtgtttccatttgtatgcattttctgctttgtagttgttcctgaagaagaagcaggcaagaaggttgttctgtctaaattagtgactttgatgcgta  10877100                                                     <---------WOX13(1)                                                    <---------ANAC58                                            --------->ANAC55(2) <-----------HVH21                          <---------ANAC55(2) ->ANAC55(2)                           <------ZmHOX2a(1) --->GT1                             --------->LBD16<---------ANAC46 --ANAC55(2)                        --------->HSFB2a(2) --ANAC46 --------->ANAC58          <-----------RAV1(2)                                            -- --ANAC58 --------->ANAC58          <---------HSFB2a(2)                                         <---- --ANAC58 --------->ANAC46        ------>ZmHOX2a(1) <---------ANAC58                <---------AHL20(2)   aattgtcagaacaaggaatcgatgctcaaaactgtcctccaggagtacgtagttgcttgatatgtccgaaggtatcgcatgcttatatatatgccaatac  10877200                                               ----------->GT1                                              --------->DAG2             <----------DOF2                                    --------->ARR14(2)                 --------->ZAT18                                    <---------ARR14(2)                 <-------TEIL                                 <---------ANAC58                    <---------PCF2                         <-------TEIL       ---------->DOF2         <---------ANAC58                    <---------WOX13(1)<---------ANAC46              <---------ANAC58                   <---------ANAC46 --------->ARR11(3)             <---------MYB46(3)                   <---------ANAC58 --------->GLK1(2)             <---------ANAC46 -------->DOF2<-----------RAV1(1)<---------ANAC58             <---------ANAC58                <------ -----ANAC55(2)    <---------ANAC58 <---------ARR11(3)        <---------ANAC58<---------ZAT6---------   ttaaagtactatgtggatgttgcttgattcatgttgagtatcttggaaaaggctaatttagataacttgtgggtgcattagtgtgaagttggagactctg  10877300  Previous    Next  AGI:  At1g30660.1    Description:  toprim domain-containing protein. similar to toprim domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G30680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42605.1); contains InterPro domain Toprim, primase; (InterPro:IPR006647); contains InterPro domain Toprim subdomain; (InterPro:IPR006154); contains InterPro domain TOPRIM; (InterPro:IPR006171) Range:  from: 10876835    to: 10878999    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.