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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
-
-
-
-
====================
HOX2a_HOX2a
-
===================================
===========================
HOX2a_HOX2a
<---------
ZAT18
<------
ZmHOX2a(2)
-
<-----------
RAV1(2)
--------->
ZAT18
--------->
ARR14(2)
-
--------->
YAB1
<------
NtERF2
<---------
ARR14(2)
<--
------->
ZAT6
------>
NtERF2
--------->
AGP1
------->
GAMYB
-->
NtERF2
<---------
RAP2.6(2)
----------------->
AGL3
---------
-->
At4g35610
--------->
At4g35610
----------------->
AGL2
------>
ZmHOX2a(1)
-----
---->
RAV1(2)
---------->
DOF2
================================
HOX2a_HOX2a
--------->
MYB46(3)
---
At4g35610
--------->
WRKY18(1)
------>
ZmHOX2a(1)
--------->
ARR11(3)
------>
ZmHOX2a(1)
gccactagcatcagatggtcaagaagcggccgagtaccctctccttcccaaaaactctccaaaaacagatccagcattgtcctccctccttcaacctcct
10087700
<----------
DOF2
-------->
ANAC58
-------->
ANAC58
-------->
bZIP60(2)
-------->
ANAC46
<---------
GLK1(2)
-------->
O2
<---------
ARR11(3)
==
HOX2a_HOX2a
---------->
ID1
<------
ZmHOX2a(1)
<---------
ARR14(2)
-------->
ANAC55(1)
<-----------
GT1
--------->
HSFB2a(2)
--------->
ARR14(2)
-------->
ANAC55(2)
--------->
YAB1
<---------
HSFB2a(2)
--------->
ETT(2)
-------
ALFIN1
<---------
ICU4
<-----------
RAV1(1)
<---------
ANAC58
<---------
STY1(2)
>
AtMYB61
--------->
ATHB12
<---------
MYB52(1)
<---------
ANAC58
--------->
STY1(2)
->
ZmHOX2a(1)
<---------
YAB1
<---------
At5g28300
------>
NtERF2
--------->
DEAR3(1)
<------
ZmHOX2a(1)
ccacgtaagctttgttcaccattgctataatcaccgttttgttgtttcccattgctgccttgtctaggaccgcctctagctcgtccacaggatactctgt
10087800
-
==
--
<-----------
GT1
--------->
DAG2
<---
<---------
ARR11(3)
---------->
DOF2
----
--------->
ARR11(3)
--------->
YAB1
<---
--------->
AHL20(2)
<---------
YAB1
<--------
<---------
AHL20(2)
--------->
GLK1(2)
<---------
ZAT14
--------->
ANAC46
------>
ZmHOX2a(1)
<---------
GLK1(2)
--------->
ZAT14
--------->
ZAT6
<-----------
ARR10
<---------
YAB1
----------->
GT1
<---------
ANAC46
ccatct
ctatttaacacaaaacatttaaaatcttcctatatttactctcaaattccgattctattataaagtaacttac
agtttcgacattgtgtagtag
10087900
---------->
DOF2
<------
NtERF2
--------->
LBD16
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
<---------
LBD16
<------
NtERF2
--------->
ATERF1(1)
<------
ZmHOX2a(2)
------>
NtERF2
--------->
TOE1(2)
--------->
PCF2
--------->
LBD16
---------->
HVH21
<---------
RAP2.3(1)
--------->
DEAR3(1)
==============
HOX2a_HOX2a
<---------
ATERF1(1)
<------
NtERF2
---->
ZmHOX2a(2)
--------->
DEAR3(1)
------>
NtERF2
------
AGP1
<---------
WOX13(1)
--------->
ANAC46
<---------
ALFIN1
<------
ZmHOX2a(1)
----->
ARR14(2)
--------->
At5g28300
--------->
DAG2
--------->
MYB46(3)
<------
NtERF2
------
ARR14(2)
--------->
TOE2(3)
---------->
DOF2
--------->
MYB52(1)
--------->
LBD16
-
ANAC46
<------
ZmHOX2a(1)
----------->
GT1
--------->
RAP2.3(3)
------->
GAMYB
<---------
LBD16
atcggacataggatcagaaaccgtaattgatgagaaatagaaatataaggcgcccgcaaagagaagagcaacggccaccgcgagattgccggaggagttg
10088000
--------->
ARR14(2)
<-----------
GT1
--------->
TOE2(3)
<---------
DAG2
--------->
ANAC58
<-------------
<----------
DOF2
--------->
ANAC58
<---------
LBD16
<---------
ZAT18
*
TSS
--------->
ANAC46
<-----------
TBP
--------------->
AtSPL8
<---------
MYB52(1)
<-----------
GT1
<---------
ARR14(2)
<------
ZmHOX2a(1)
--------->
ZAT18
<-------
GAMYB
------------>
CBF
<-----------
GT1
--------->
ICU4
<---------
AHL20(2)
<-----------
RAV1(1)
<-----------
GT1
--------->
LBD16
aaggaaggcat
gtttaggagactcacctattttatgtgcccttttctctctctctgt
tgattcgcacacaacaatttaacctatatataaccggatttgg
10088100
--------->
ANAC58
--------->
ANAC58
----------->
TGA1
------>
MYB46(1)
----------->
HVH21
--------->
YAB1
<---------
MYB111(2)
<---------
YAB1
--------->
ANAC58
<---------
MYB46(2)
<---------
TOE2(3)
--------->
ANAC58
--------->
AtMYB61
<---------
AHL20(2)
--------->
ANAC46
--------->
ANAC46
--------->
AHL20(1)
<---------
TOE1(3)
--------->
ANAC46
--------->
ANAC58
--------->
AHL20(2)
<---------
TOE2(3)
<---------
ANAC55(2)
--------->
ANAC58
<---------
AHL20(2)
<---------
ANAC46
--------->
ANAC46
--------->
ZAT6
<---------
AHL20(1)
<---------
TOE2(3)
--------->
ANAC55(1)
>>
----
AG
------>
MYB83
------------>
CBF
<---------
ARR11(3)
--------->
ANAC55(2)
<---------
atgtaacaccaaactcaagtcatcccaatttaatgtgaatatcactgacgtttttaaggttccttctctaatacgttacacacgaagcatcatcttttgt
10088200
<----
--------->
TOE2(2)
<----
--------->
TOE1(2)
<-----
--------->
YAB1
<-----
<---------
YAB1
------
--------->
YAB1
<---------
YAB1
<--------
HAHB4
--------->
GLK1(2)
<---------
ICU4
<---------
ARR11(3)
--------->
TOE2(3)
<---------
YAB1
--------->
ARR14(2)
<---------
ARR14(2)
--------->
YAB1
<---------
ARR14(2)
--------->
ARR14(2)
--------->
ICU4
<---------
GLK1(2)
>>>>>
ZML2
------->
TEIL
<----------
DOF2
<---------
YAB1
---------->
DOF2
----------
-
DOF2
--------->
ANAC55(2)
--------->
LBD16
--------->
GLK1(2)
<---------
ARR14(1)
<
tctagggtttttgtgtctacgtatttgtatttctactttaatgtctcccgattattatcatgcgatattctattttcccaaagagaatcttataaaagat
10088300
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ANAC55(2)
<-----------
GT1
<---------
AHL20(2)
<-----------
GT1
<---------
AHL20(2)
<-----------
GT1
--------->
ANAC55(2)
<---------
AHL20(1)
>>>>>>>>>
GATA-1
-----
CCA1(1)
--------->
ANAC58
<---------
ARR11(3)
<----------
DOF2
-----
RVE1(1)
--------->
ANAC55(1)
<---------
CCA1(2)
<---------
RVE1(1)
----
GLK1(2)
--------->
ANAC46
<---------
ARR11(3)
--------->
AGP1
----
ARR11(3)
<---------
ANAC55(2)
<-----------
GT1
<---------
AGP1
--->
ARR11(3)
--------->
ANAC58
--------->
ARR14(2)
--------->
ARR11(3)
>
DOF2
<---------
ICU4
----------->
GT1
<---------
ARR14(2)
<---------
ARR11(3)
-----------
GT1
--------->
MYB52(1)
<---------
CCA1(2)
<---------
CCA1(2)
tttttcaatatttacttatttatctcagaataacaggtaacaaaattttccatatattcccatatatttgcctcttagatcttttatagataaacattca
10088400
<---------
ZAT6
<---------
WRKY12
<---------
ANAC46
---------->
DOF2
---------->
ID1
--------->
AtLEC2
<---------
TOE2(3)
--------->
ANAC58
<---------
ANAC46
--------->
AHL20(2)
--------->
ANAC58
<---------
TOE1(3)
--------->
MYB46(3)
--------->
DAG2
<---------
TOE2(3)
<---------
YAB1
<---------
AHL20(2)
---------->
DOF2
gcaattcaaggttttgtggttttgtgttatgtttcaacaaatattaaaatttacagacaaatcacattcaccataaagccatgaaagtcaactaatagta
10088500
<---------
AHL20(2)
--------->
AHL20(2)
--------->
ANAC58
<---------
AHL20(1)
--------->
ANAC58
----------->
RAV1(1)
---------->
DOF2
--------->
ANAC58
----------->
GT1
--------->
MYB59
<------
MYB83
--------->
MYB46(2)
<------
MYB46(1)
<---------
MYB52(1)
<---------
MYB46(3)
<-------
TEIL
<<<<<<<<<
MYB1
--------->
AHL20(1)
<---------
At4g35610
----------->
GT1
<<<<<<<<<
MYB2
--------->
AHL20(2)
<---------
RAP2.6(2)
--------->
ANAC58
<---------
AHL20(2)
--------->
ANAC58
--------->
RAP2.6(3)
--------->
ANAC58
--------->
AHL20(2)
--------->
ANAC58
--------->
AHL20(2)
--------->
CCA1(2)
<---------
ICU4
--------->
ANAC58
<---------
YAB1
ctagacataaatttcggctggtaaagccaaacctatagagagacggaagtaaattcatatttatatcagttaggcaacaagaaataaattgtcaatggca
10088600
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AGI:
At1g28710.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G28700.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64421.1); contains domain PTHR10483:SF6 (PTHR10483:SF6); contains domain PTHR10483 (PTHR10483)
Range:
from: 10086623
to: 10088057
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.